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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR009741
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.730s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0347409.1
n.a. early flowering 4 [Pisum sativum] gi|270356912|gb|AAX47177.2| chr0 182303363 182304447 +
2 domain predictions
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Lj3g3v2634530.1
n.a. ELF4-like protein [Medicago truncatula] gi|357513901|ref|XP_003627239.1| chr3 32246256 32247639 +
2 domain predictions
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Lj4g3v2179310.1
n.a. PREDICTED: protein ELF4-LIKE 4-like isoform 1 [Glycine max] gi|356565831|ref|XP_003551140.1| chr4 30175253 30176187 -
2 domain predictions
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Lj6g3v1201380.1
n.a. PREDICTED: protein ELF4-LIKE 4-like [Cicer arietinum] gi|502165214|ref|XP_004513473.1| chr6 14902855 14905467 +
2 domain predictions
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LotjaGi3g1v0415900.1
n.a. Protein ELF4-LIKE 4; TAIR: AT1G17455.1 ELF4-like 4; Swiss-Prot: sp|Q570U6|EF4L4_ARATH Protein ELF4-LIKE 4; TrEMBL-Plants: tr|I3SVD8|I3SVD8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0415900 LjG1.1_chr3 82172769 82175361 +
2 domain predictions
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LotjaGi3g1v0415900.2
n.a. Protein ELF4-LIKE 4; TAIR: AT1G17455.1 ELF4-like 4; Swiss-Prot: sp|Q570U6|EF4L4_ARATH Protein ELF4-LIKE 4; TrEMBL-Plants: tr|I3SVD8|I3SVD8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0415900 LjG1.1_chr3 82173677 82174021 +
2 domain predictions
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LotjaGi4g1v0327000.1
n.a. Protein ELF4-LIKE 4; TAIR: AT1G17455.1 ELF4-like 4; Swiss-Prot: sp|Q570U6|EF4L4_ARATH Protein ELF4-LIKE 4; TrEMBL-Plants: tr|I3SI69|I3SI69_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0327000 LjG1.1_chr4 70527704 70531094 +
2 domain predictions
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LotjaGi4g1v0327000.2
n.a. Protein ELF4-LIKE 4; TAIR: AT1G17455.1 ELF4-like 4; Swiss-Prot: sp|Q570U6|EF4L4_ARATH Protein ELF4-LIKE 4; TrEMBL-Plants: tr|I3SI69|I3SI69_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0327000 LjG1.1_chr4 70528990 70529343 +
2 domain predictions
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LotjaGi6g1v0226400.1
n.a. Protein ELF4-LIKE 4; TAIR: AT1G17455.1 ELF4-like 4; Swiss-Prot: sp|Q570U6|EF4L4_ARATH Protein ELF4-LIKE 4; TrEMBL-Plants: tr|I3STN0|I3STN0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0226400 LjG1.1_chr6 53253481 53256138 +
2 domain predictions
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LotjaGi6g1v0226400.2
n.a. Protein ELF4-LIKE 4; TAIR: AT1G17455.1 ELF4-like 4; Swiss-Prot: sp|Q570U6|EF4L4_ARATH Protein ELF4-LIKE 4; TrEMBL-Plants: tr|I3STN0|I3STN0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0226400 LjG1.1_chr6 53253573 53256255 +
2 domain predictions
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