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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR010433
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.832s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0242879.1
n.a. PREDICTED: peptidyl-prolyl cis-trans isomerase G-like [Cicer arietinum] gi|502140248|ref|XP_004504129.1| chr0 125970323 125976272 +
2 domain predictions
1 GO term
Lj0g3v0242879.2
n.a. PREDICTED: peptidyl-prolyl cis-trans isomerase G-like [Cicer arietinum] gi|502140248|ref|XP_004504129.1| chr0 125970323 125976272 +
2 domain predictions
1 GO term
Lj4g3v2730310.1
n.a. PREDICTED: peptidyl-prolyl cis-trans isomerase G-like [Cicer arietinum] gi|502140248|ref|XP_004504129.1| chr4 36677434 36677796 +
2 domain predictions
1 GO term
Lj4g3v2730340.1
n.a. PREDICTED: peptidyl-prolyl cis-trans isomerase G-like [Cicer arietinum] gi|502140248|ref|XP_004504129.1| chr4 36678256 36682667 +
2 domain predictions
1 GO term
LotjaGi3g1v0524200.1
n.a. Translation initiation factor; TAIR: AT4G38710.2 glycine-rich protein; Swiss-Prot: sp|Q9SZP8|IF4B3_ARATH Eukaryotic translation initiation factor 4B3; TrEMBL-Plants: tr|A0A1J7H7M2|A0A1J7H7M2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0524200 LjG1.1_chr3 94117203 94120912 -
3 domain predictions
1 GO term
LotjaGi3g1v0524200.2
n.a. eukaryotic translation initiation factor-like protein; TAIR: AT4G38710.2 glycine-rich protein; Swiss-Prot: sp|Q9SZP8|IF4B3_ARATH Eukaryotic translation initiation factor 4B3; TrEMBL-Plants: tr|A0A0S3SE05|A0A0S3SE05_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0524200 LjG1.1_chr3 94117203 94120912 -
3 domain predictions
1 GO term
LotjaGi4g1v0045900.1
n.a. Eukaryotic translation initiation factor-like protein; TAIR: AT1G11480.1 eukaryotic translation initiation factor-like protein; Swiss-Prot: sp|P23588|IF4B_HUMAN Eukaryotic translation initiation factor 4B; TrEMBL-Plants: tr|I1KQS4|I1KQS4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0045900 LjG1.1_chr4 5386001 5392462 +
2 domain predictions
1 GO term
LotjaGi4g1v0392900.1
n.a. eukaryotic translation initiation factor-like protein; TAIR: AT3G26400.1 eukaryotic translation initiation factor 4B1; Swiss-Prot: sp|Q9LIN5|IF4B1_ARATH Eukaryotic translation initiation factor 4B1; TrEMBL-Plants: tr|A0A0S3QYR9|A0A0S3QYR9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0392900 LjG1.1_chr4 77124558 77131120 +
3 domain predictions
1 GO term
LotjaGi4g1v0392900.2
n.a. eukaryotic translation initiation factor-like protein; TAIR: AT3G26400.1 eukaryotic translation initiation factor 4B1; Swiss-Prot: sp|Q9LIN5|IF4B1_ARATH Eukaryotic translation initiation factor 4B1; TrEMBL-Plants: tr|I1KSX1|I1KSX1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0392900 LjG1.1_chr4 77124558 77131120 +
3 domain predictions
1 GO term