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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2274590 |
| Transcript ID | Lj6g3v2274590.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: potassium channel AKT2/3-like [Cicer arietinum] gi|502076890|ref|XP_004485488.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | – | – | |
| PANTHER | 5 | 571 | 567 | 0 | – | |
| Phobius | 5 | 24 | 20 | – | – | |
| TMHMM | 5 | 24 | 20 | – | – | |
| PANTHER | 5 | 571 | 567 | 0 | – | |
| Gene3D | 6 | 70 | 65 | 9.70E-19 | – | |
| SUPERFAMILY | 7 | 61 | 55 | 2.51E-18 | – | |
| Pfam | 7 | 60 | 54 | 1.00E-11 | ||
| PRINTS | 8 | 25 | 18 | 7.90E-06 | ||
| Phobius | 25 | 35 | 11 | – | – | |
| PRINTS | 34 | 45 | 12 | 7.90E-06 | ||
| Phobius | 36 | 61 | 26 | – | – | |
| TMHMM | 39 | 61 | 23 | – | – | |
| PRINTS | 52 | 61 | 10 | 7.90E-06 | ||
| Phobius | 62 | 571 | 510 | – | – | |
| SUPERFAMILY | 65 | 257 | 193 | 7.04E-37 | ||
| Gene3D | 122 | 251 | 130 | 1.60E-21 | ||
| SMART | 138 | 255 | 118 | 2.60E-24 | ||
| CDD | 138 | 251 | 114 | 5.10E-23 | – | |
| ProSiteProfiles | 138 | 257 | 120 | 21.059 | ||
| Pfam | 158 | 241 | 84 | 3.60E-13 | ||
| SUPERFAMILY | 245 | 450 | 206 | 2.02E-34 | ||
| Gene3D | 252 | 462 | 211 | 5.90E-36 | ||
| ProSiteProfiles | 280 | 442 | 163 | 30.953 | ||
| SMART | 280 | 309 | 30 | 990 | ||
| Pfam | 289 | 368 | 80 | 8.70E-13 | ||
| CDD | 308 | 431 | 124 | 4.57E-27 | – | |
| SMART | 313 | 342 | 30 | 6.00E-06 | ||
| ProSiteProfiles | 313 | 345 | 33 | 12.289 | ||
| PRINTS | 314 | 329 | 16 | 1.00E-07 | ||
| SMART | 346 | 377 | 32 | 50 | ||
| Pfam | 371 | 438 | 68 | 6.70E-07 | ||
| SMART | 380 | 406 | 27 | 1900 | ||
| SMART | 410 | 439 | 30 | 6.40E-04 | ||
| ProSiteProfiles | 410 | 442 | 33 | 11.407 | ||
| PRINTS | 426 | 440 | 15 | 1.00E-07 | ||
| ProSiteProfiles | 498 | 571 | 74 | 26.609 | ||
| Pfam | 498 | 569 | 72 | 4.90E-22 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Voltage-gated potassium channel activity | Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Potassium ion transport | The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj6g3v2274590.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2274590.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.