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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013760
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We have found 16 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.914s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v0146560.1
n.a. PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like isoform X1 [Cicer arietinum] gi|502127538|ref|XP_004499748.1| chr2 2587161 2612004 +
2 domain predictions
2 GO terms
Lj3g3v0826110.1
n.a. PREDICTED: DNA topoisomerase 2-like [Glycine max] gi|356555329|ref|XP_003545986.1| chr3 10464707 10471344 +
2 domain predictions
2 GO terms
Lj3g3v0826110.2
n.a. PREDICTED: DNA topoisomerase 2-like [Glycine max] gi|356555329|ref|XP_003545986.1| chr3 10470010 10471344 +
2 domain predictions
2 GO terms
Lj4g3v0877830.1
n.a. PREDICTED: DNA topoisomerase 2-like [Cicer arietinum] gi|502128025|ref|XP_004499912.1| chr4 13306784 13316143 +
2 domain predictions
2 GO terms
Lj4g3v0877830.3
n.a. PREDICTED: DNA topoisomerase 2-like [Cicer arietinum] gi|502128025|ref|XP_004499912.1| chr4 13310019 13311481 +
2 domain predictions
2 GO terms
LotjaGi1g1v0663600.1
n.a. DNA gyrase subunit B; TAIR: AT5G04130.1 DNA GYRASE B2; Swiss-Prot: sp|Q5YLB4|GYRB_NICBE DNA gyrase subunit B, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151TTM7|A0A151TTM7_CAJCA DNA gyrase subunit B; Found in the gene: LotjaGi1g1v0663600 LjG1.1_chr1 122488334 122504884 -
2 domain predictions
2 GO terms
LotjaGi2g1v0064900.1
n.a. DNA gyrase subunit A; TAIR: AT3G10690.1 DNA GYRASE A; Swiss-Prot: sp|Q5YLB5|GYRA_NICBE DNA gyrase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7I9Z9|G7I9Z9_MEDTR DNA gyrase subunit A; Found in the gene: LotjaGi2g1v0064900 LjG1.1_chr2 15096564 15123910 -
2 domain predictions
2 GO terms
LotjaGi2g1v0064900.2
n.a. DNA gyrase subunit A; TAIR: AT3G10690.1 DNA GYRASE A; Swiss-Prot: sp|Q5YLB5|GYRA_NICBE DNA gyrase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|I1L2U5|I1L2U5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0064900 LjG1.1_chr2 15097616 15122397 -
2 domain predictions
2 GO terms
LotjaGi2g1v0064900.3
n.a. DNA gyrase subunit A; TAIR: AT3G10690.1 DNA GYRASE A; Swiss-Prot: sp|Q5YLB5|GYRA_NICBE DNA gyrase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7I9Z9|G7I9Z9_MEDTR DNA gyrase subunit A; Found in the gene: LotjaGi2g1v0064900 LjG1.1_chr2 15097616 15122397 -
2 domain predictions
2 GO terms
LotjaGi2g1v0064900.4
n.a. DNA gyrase subunit A; TAIR: AT3G10690.1 DNA GYRASE A; Swiss-Prot: sp|Q5YLB5|GYRA_NICBE DNA gyrase subunit A, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7I9Z9|G7I9Z9_MEDTR DNA gyrase subunit A; Found in the gene: LotjaGi2g1v0064900 LjG1.1_chr2 15097616 15122397 -
2 domain predictions
2 GO terms
LotjaGi3g1v0121000.1
n.a. DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp|O24308|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr|I1MJQ7|I1MJQ7_SOYBN DNA topoisomerase 2; Found in the gene: LotjaGi3g1v0121000 LjG1.1_chr3 14822816 14830581 +
2 domain predictions
2 GO terms
LotjaGi3g1v0121000.2
n.a. DNA topoisomerase 2; TAIR: AT3G23890.2 topoisomerase II; Swiss-Prot: sp|O24308|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr|I1MJQ7|I1MJQ7_SOYBN DNA topoisomerase 2; Found in the gene: LotjaGi3g1v0121000 LjG1.1_chr3 14823082 14830141 +
2 domain predictions
2 GO terms
LotjaGi4g1v0112400_LC.1
n.a. DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp|O24308|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr|A0A151TWJ6|A0A151TWJ6_CAJCA DNA topoisomerase 2; Found in the gene: LotjaGi4g1v0112400_LC LjG1.1_chr4 16071870 16081153 +
2 domain predictions
2 GO terms
LotjaGi4g1v0112400_LC.2
n.a. DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp|O24308|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr|A0A151TWJ6|A0A151TWJ6_CAJCA DNA topoisomerase 2; Found in the gene: LotjaGi4g1v0112400_LC LjG1.1_chr4 16072269 16081004 +
2 domain predictions
2 GO terms
LotjaGi4g1v0112400_LC.3
n.a. DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp|O24308|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr|A0A151TWJ6|A0A151TWJ6_CAJCA DNA topoisomerase 2; Found in the gene: LotjaGi4g1v0112400_LC LjG1.1_chr4 16073289 16081004 +
2 domain predictions
2 GO terms
LotjaGi4g1v0112600.1
n.a. DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp|O24308|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr|A0A151TWJ6|A0A151TWJ6_CAJCA DNA topoisomerase 2; Found in the gene: LotjaGi4g1v0112600 LjG1.1_chr4 16088708 16102613 +
2 domain predictions
2 GO terms