Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013990
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.655s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0284239.1
n.a. seed maturation protein PM22 [Glycine max] gi|351727629|ref|NP_001237935.1| chr0 147462599 147463681 -
2 domain predictions
1 GO term
Lj2g3v0777280.1
n.a. Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family isoform 1 [Theobroma cacao] gi|508783562|gb|EOY30818.1| chr2 12377314 12379524 -
2 domain predictions
1 GO term
Lj2g3v3007530.1
n.a. Desiccation protectant protein Lea14-like protein [Medicago truncatula] gi|357493805|ref|XP_003617191.1| chr2 38869029 38871760 -
2 domain predictions
1 GO term
LotjaGi1g1v0052900.1
n.a. Late embryogenesis abundant protein Lea14; TAIR: AT2G44060.1 Late embryogenesis abundant protein, group 2; Swiss-Prot: sp|P46518|LEA14_GOSHI Late embryogenesis abundant protein Lea14-A; TrEMBL-Plants: tr|I3T4F6|I3T4F6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0052900 LjG1.1_chr1 7456395 7459603 +
2 domain predictions
1 GO term
LotjaGi1g1v0481800.1
n.a. Late embryogenesis abundant protein Lea14; TAIR: AT1G01470.1 Late embryogenesis abundant protein; Swiss-Prot: sp|P46519|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr|I3STX2|I3STX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0481800 LjG1.1_chr1 99518005 99522464 +
2 domain predictions
1 GO term
LotjaGi1g1v0481800.2
n.a. Late embryogenesis abundant protein Lea14; TAIR: AT1G01470.1 Late embryogenesis abundant protein; Swiss-Prot: sp|P46519|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr|I3STX2|I3STX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0481800 LjG1.1_chr1 99520051 99521886 +
2 domain predictions
1 GO term
LotjaGi1g1v0481800.3
n.a. Late embryogenesis abundant protein Lea14; TAIR: AT1G01470.1 Late embryogenesis abundant protein; Swiss-Prot: sp|P46519|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr|I3STX2|I3STX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0481800 LjG1.1_chr1 99520117 99521890 +
2 domain predictions
1 GO term
LotjaGi2g1v0214900.1
n.a. Late embryogenesis abundant hydroxyproline-rich glycoprotein; TAIR: AT4G13270.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; Swiss-Prot: sp|Q9SRN0|NHL1_ARATH NDR1/HIN1-like protein 1; TrEMBL-Plants: tr|A0A0S3TD54|A0A0S3TD54_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0214900 LjG1.1_chr2 66566531 66569312 -
2 domain predictions
1 GO term
LotjaGi3g1v0388200.1
n.a. Late embryogenesis abundant protein Lea14; TAIR: AT1G01470.1 Late embryogenesis abundant protein; Swiss-Prot: sp|P46519|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr|Q9XER5|Q9XER5_SOYBN Seed maturation protein PM22; Found in the gene: LotjaGi3g1v0388200 LjG1.1_chr3 78507825 78509511 +
2 domain predictions
1 GO term
LotjaGi3g1v0476200.1
n.a. Late embryogenesis abundant hydroxyproline-rich glycoprotein; TAIR: AT3G44380.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; Swiss-Prot: sp|P38219|OLA1_YEAST Obg-like ATPase 1; TrEMBL-Plants: tr|A0A072UVF9|A0A072UVF9_MEDTR Late embryogenesis abundant hydroxyproline-rich glycoprotein; Found in the gene: LotjaGi3g1v0476200 LjG1.1_chr3 89301577 89302801 +
2 domain predictions
1 GO term
LotjaGi3g1v0476200.2
n.a. Late embryogenesis abundant hydroxyproline-rich glycoprotein; TAIR: AT3G44380.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family; Swiss-Prot: sp|P38219|OLA1_YEAST Obg-like ATPase 1; TrEMBL-Plants: tr|A0A072UVF9|A0A072UVF9_MEDTR Late embryogenesis abundant hydroxyproline-rich glycoprotein; Found in the gene: LotjaGi3g1v0476200 LjG1.1_chr3 89301957 89302683 +
2 domain predictions
1 GO term
LotjaGi6g1v0186500.1
n.a. Late embryogenesis abundant protein Lea14; TAIR: AT2G44060.1 Late embryogenesis abundant protein, group 2; Swiss-Prot: sp|P46519|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr|C6T750|C6T750_SOYBN Late-embryogenesis abundant protein 2; Found in the gene: LotjaGi6g1v0186500 LjG1.1_chr6 48043350 48046875 +
2 domain predictions
1 GO term
LotjaGi6g1v0186500.2
n.a. Late embryogenesis abundant protein Lea14; TAIR: AT2G44060.1 Late embryogenesis abundant protein, group 2; Swiss-Prot: sp|P46519|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr|C6T750|C6T750_SOYBN Late-embryogenesis abundant protein 2; Found in the gene: LotjaGi6g1v0186500 LjG1.1_chr6 48044089 48045257 +
2 domain predictions
1 GO term