Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0481800 |
| Transcript ID | LotjaGi1g1v0481800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Late embryogenesis abundant protein Lea14; TAIR: AT1G01470.1 Late embryogenesis abundant protein; Swiss-Prot: sp|P46519|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr|I3STX2|I3STX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0481800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:99518005..99522464) extracted from Lotus japonicus Gifu genome v1.2.
AATTAAATGTGATATATTAATGCCATTAACTAAGAATAATTTTGAATCACAAATACAAATTGCCAACTGAACCAATGCCA ATGGAACGTACACTTGCAACTTGTAAACGAAGAGCCACTAGAAAATCTTTTTGTGGTTATTTTGGCTCCCTTAAATTGAG GGAAAAGTCAAAAGGTATTGTTTGACCTTTATTACAAGGATCAGCACGTTTAGCTTCATAATTCATTCACATTCTATCTT CATTTTCAAGTTTAACTTTCTCTTCTCTACTCATCAACGTTCATCAACAATAATGGAGGTCAGTTTTCTCAGCAAACTAT AATCATCTTTTTTTCATTAGTTTCTTCTACCTAGCTTATTCTTCTTCCATACATATTTCTCTGCTTTCAATCATTCATTC TCCAAATATTAATTCCGTTGCTAGTTCTTAATCTTTTATACCGGCCTCATCTCTAGCCCAATAGAAGCGGATTATAGCCC TAAGCTAATCTCACATGAAAAATGTCATTCAATCTTGAAATTGTCATTCTAATAACATGTTTAATTAGATTCGTGTTTAA TAATGTTAGAGTCACATCTTTCCTCACAAACGCTAAGTCTAATTTTTGATAGAATCACTTCTCCAAACTTATCAAATTTT CAAGCAAACATTAATATGATTTCCCAGATCCAAAACACAAAGTTAATCGGCATATCAAGTTTAAGAGAAATTTCTTAATG ATAAGAAAACATTACATAATTAGGATTTTGCCTCGGATGGAAATTTTTTTGTATTTAATTTTTATATTTGACCAATTAAA TTGCGCTGTGGAGGTATATATGAATAGTAGTAGTTTTAATTCAAATAACATAACACAACTCGATAGCTGAGTCGGCAAGG AATCATATATCAAATGGAGGCCTGATTGCCTCTAATCATCACTTAGGAATTATTTGGTATAGAGAAAAGAAAAGTGAGTA GACAATGAAATGATTTTTGAATTGTTTCGTTGACAAAAAAATTGAAAAGAAAAGTAAGAGATTGAAAAGAAAAGTAAGAG AAAAGAAAAAAAGAATGTATGTAAATGACACAAATATCTTTAATTAAAAATTAAATATGTTAATTAGATTTCTATCAAAA CAAACTATAATTTTAGAAATATTATAAAATAGTTATCATTATGTATTTTAAATACATTTTTATTTTATTTTTTTAAATCA CACAAAATACTCATCTCCTCACATGTTCTCTTCACATCACGGGAGAAAATACCCCACCATACATTTTCTCTTCTCTCCAT GTTTTCTATTGTATCAAAGAAGAGAAAAAAGCATCGAATTTTTTTTTTTTCAATTACATTTTCTTTTCTCTTTTCTTTAT CTCATGCACAAGCCCTTGTAGTCCACAATCAGTCTCACAAGTTGTTTACGGTAATTACAAATGAAATAATTAATATGTTC AGATGAACTTTTCTTTTACCACAATCAATTCTAAAATTCATAAACTACTTACAAACAATTTCCCCATAATTGATTCTAAT TTACCAATCATCAATTTTTCAAACATCTAATGTTCCTTCAACAATAATTTATAAACCACCAAATAGTATAAACACCTTAG AACACCTTTCACCTATTAGTCTCTCTCATCCCTTCATATATCCTCTAATTAATATTCTACACCACCTGAGTATACACTAT TCTTTATTCATATTCCTTCTTTCCTAAGCTAATAAATTATTTTTTTTCCCCGACATATACTTCTCAATGAAATAAAGAAT AGTAATAGAAGAATAGAGAATCATATGTCAAACTCACTGGGACGGTGCTTCATCTACACGTCACCAAACCGAAGAAAACG ACACCGACAGCGACCATAATGATGAGTGTCTTATTATCATTTATCATCATCGGATCTAATCTCATCTCATTCTCCGAACC AAAACGACACCAGACCAGACAATTCTCCGAACGCGGAGGCGGCGCCACGTGTCATTCACGTGTCCTCACCGCTTTCCCTG CGCGTGCGCGTCTTTTCGATTTCCTGATTTCTAACTATAAATAAATATGAGACTGGGTTTGGTGTCATTAAGCGTTATCA GTGGAGTGAGTCTGATATTTGCAGTGTTGAAAATGTCGCAGTTGTTGGATAAAGCCAAAGCCTTTGTTGCTGAGAAAGTG GCCAACATGCCTATGCCTGAGGCCAGTGTTACAGACGTTGACTTCAAGAAGGTGAGTCGCGAGTGTGTTGAGTACCTGGC TAAGATCTCTGTTTCCAACCCTTATTCAACACCGATTCCTATCTGTGAGATCAACTACACCCTCAAAAGTGCTGGCAGGT TGCTTCCTTTTCTCGATCTCTTCTTTCTTCTTGTTATTTTTAACGTTGATCATCTATTTATATGTGTTGGTTTTGATTTC AGATTCTTGTGTTTGATTTTGATATATTGTTTTGGTGAATTGTCTCGATGATCATGCATTGCTGATTGATTGGGTTCATT TTTTAATTGCAATTTGCAACTCATGGATCATGGATTATAGTTGTTGGGTTAACTATGCAGGATCTGTTTTTACTAATTTG TTTATTTGGTTGTTTTTTTTTCTTCTTCTTTGACGGTGCACCTATCAGTGCCGATGGCAAGACTAATTTAGTTCAAAGAC CAATGATTCATAAACCAACCATCAAATAGTGCACACATTTTGGAATAGTTTTTTTTTTCCTCTATATCTCATTCTTCTTA TTACATCACATCATATATCACATTTATTATTTATCTCTTCACTCTTCCTATATTTCTCTAATGGTCTATACCGTTTGAGA TAAGTGATAAGAAGATAAAAAGAGATAAGTGATAAATGTGATATATGATGTGATGTGATAAGAAAAAAAAAATTAGAAAA AAAAAAGTGTTCTGATGTATGCACTATTTGGTCTGGTGGTCTATGAATCAATGTTGTAGTTGGAAATAGTGTAACATTTA CTCTTAACTAGTGTTAGAAGAATTGAACCAAATTGATTGGCCCGACCAGGAGTCAAGATCCTGATTGGTTCAATTCACTC TCTCGTAACCGATATGGCAAATAATTTATCATAATCGGTCCAAAATCAGTAAAACCAATTAGAACCGAATAAAAATCGAT ATAAATGGGTTCAGTCATTTTCTTGTACTTTTCCGAGTTTCATTTATGCACACACATTCCTAAAATAAAAGGTTAAAAAT TTATGTATTGAAGATTAAAAATTTGATTTCTTTTACTATTGAAGGTTAAAAAGTTATATATCCTGTGTTATTTTCATCGT ATGTAATTATAAATGTATTTTTAAAAAATATTATTCGATCAATTATCGTTTTGGTTTAATTACGGTTAAATCTTTGATAC TTGATATTACCCAAAATATCATTGAATCTTGAATCAGTGTCTCAAGTGTTTGATAATCAAGTTCGAGTTCCATGAACACT CTATATCTTAATTTATTACTTTCGTGGGATTTGAATTTGTTAGCTTGCCTACTCCTTAACAAAACCTTGTTGGTGATTTG GTTATCTTTACTCATGTCTTAAAGAATTTCAATTTCAATAAATAATACTTTTGAATTTGATTTTCATATGCCTAATCATA TTTTTTGTTTGGACCTGGTAATTAATCAGGGAGATAGCATCAGGCACCATACCAGACCCAGGTTCACTGAAGGCAAGTGA CACAACACTGCTGGAAGTGCCGGTGAAGGTAGCTCACAGCATATTGCTGAGCATAGCAAAGGACATTGGTGCTGATTGGG ACATAGACTATCATTTGGATATTGGTCTTGTCATTGACCTCCCAGTCATTGGCAACTTCACCATTCCTCTTTCTCAGAAG GGAGAGATCAAGCTCCCAACCATCACTGACATGTTTGCCTAGCTAGCTCAACCACCACAACATGGGCTTAATTAGAGAAC AATAAAACAGATACACCCTGCATCTCATTTTCAGCTTTGTATCTTGAGTCACTAGCTATTTATTTTTCCCTTTGATTGTA CTTTGTTTGCCCTACACAAAAAGTTATATAGTACTAAATACATACTTCACAATAATACTAGTGTTTTTATCCGTGCGCTG CACGGCGAAAGATTTTTCTAAATTTTTTACGTTAATTTATTTTATATGAAATTGAACCGATTAACTGCTACAAAACCATA GATAACAATTGAAATTAAATTTGATTTGTTTGCACAACAATGAAATCCCAATTTAATCTAACAATGGGGGGAGGTTACAT AAATTTATAGAAGCACTAAAAAGAAAAATAGGATCCTTATGCATTCCACTTGTTGCTCGTTGACCCATCCTCATTCTTAG TTTATTGAATCTGCAAACAATTGGAAAATAGTTTAAATAAGACATTCAAATATACATCTCTCTACTTACAATGTGCATGA TACAAAGAAGTATGAAATCAAAGAAAAAACCAAATCAAGAAACACCACATAAAAATATTG
CDS sequence (LotjaGi1g1v0481800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTGTTGGATAAAGCCAAAGCCTTTGTTGCTGAGAAAGTGGCCAACATGCCTATGCCTGAGGCCAGTGTTACAGA CGTTGACTTCAAGAAGGTGAGTCGCGAGTGTGTTGAGTACCTGGCTAAGATCTCTGTTTCCAACCCTTATTCAACACCGA TTCCTATCTGTGAGATCAACTACACCCTCAAAAGTGCTGGCAGGGAGATAGCATCAGGCACCATACCAGACCCAGGTTCA CTGAAGGCAAGTGACACAACACTGCTGGAAGTGCCGGTGAAGGTAGCTCACAGCATATTGCTGAGCATAGCAAAGGACAT TGGTGCTGATTGGGACATAGACTATCATTTGGATATTGGTCTTGTCATTGACCTCCCAGTCATTGGCAACTTCACCATTC CTCTTTCTCAGAAGGGAGAGATCAAGCTCCCAACCATCACTGACATGTTTGCCTAG
Protein sequence (LotjaGi1g1v0481800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELLDKAKAFVAEKVANMPMPEASVTDVDFKKVSRECVEYLAKISVSNPYSTPIPICEINYTLKSAGREIASGTIPDPGS LKASDTTLLEVPVKVAHSILLSIAKDIGADWDIDYHLDIGLVIDLPVIGNFTIPLSQKGEIKLPTITDMFA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 150 | 150 | 2.5E-61 | – | |
| PANTHER | 2 | 151 | 150 | 1.6E-82 | – | |
| PANTHER | 2 | 151 | 150 | 1.6E-82 | – | |
| SUPERFAMILY | 3 | 149 | 147 | 1.44E-50 | – | |
| SMART | 23 | 140 | 118 | 1.1E-39 | ||
| Pfam | 43 | 139 | 97 | 7.3E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to desiccation | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water. |
Expression pattern of LotjaGi1g1v0481800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…