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Field | Value |
---|---|
Gene ID | LotjaGi1g1v0481800 |
Transcript ID | LotjaGi1g1v0481800.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Late embryogenesis abundant protein Lea14; TAIR: AT1G01470.1 Late embryogenesis abundant protein; Swiss-Prot: sp|P46519|LEA14_SOYBN Desiccation protectant protein Lea14 homolog; TrEMBL-Plants: tr|I3STX2|I3STX2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0481800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:99518005..99522464) extracted from Lotus japonicus Gifu genome v1.2.
AATTAAATGTGATATATTAATGCCATTAACTAAGAATAATTTTGAATCACAAATACAAATTGCCAACTGAACCAATGCCA ATGGAACGTACACTTGCAACTTGTAAACGAAGAGCCACTAGAAAATCTTTTTGTGGTTATTTTGGCTCCCTTAAATTGAG GGAAAAGTCAAAAGGTATTGTTTGACCTTTATTACAAGGATCAGCACGTTTAGCTTCATAATTCATTCACATTCTATCTT CATTTTCAAGTTTAACTTTCTCTTCTCTACTCATCAACGTTCATCAACAATAATGGAGGTCAGTTTTCTCAGCAAACTAT AATCATCTTTTTTTCATTAGTTTCTTCTACCTAGCTTATTCTTCTTCCATACATATTTCTCTGCTTTCAATCATTCATTC TCCAAATATTAATTCCGTTGCTAGTTCTTAATCTTTTATACCGGCCTCATCTCTAGCCCAATAGAAGCGGATTATAGCCC TAAGCTAATCTCACATGAAAAATGTCATTCAATCTTGAAATTGTCATTCTAATAACATGTTTAATTAGATTCGTGTTTAA TAATGTTAGAGTCACATCTTTCCTCACAAACGCTAAGTCTAATTTTTGATAGAATCACTTCTCCAAACTTATCAAATTTT CAAGCAAACATTAATATGATTTCCCAGATCCAAAACACAAAGTTAATCGGCATATCAAGTTTAAGAGAAATTTCTTAATG ATAAGAAAACATTACATAATTAGGATTTTGCCTCGGATGGAAATTTTTTTGTATTTAATTTTTATATTTGACCAATTAAA TTGCGCTGTGGAGGTATATATGAATAGTAGTAGTTTTAATTCAAATAACATAACACAACTCGATAGCTGAGTCGGCAAGG AATCATATATCAAATGGAGGCCTGATTGCCTCTAATCATCACTTAGGAATTATTTGGTATAGAGAAAAGAAAAGTGAGTA GACAATGAAATGATTTTTGAATTGTTTCGTTGACAAAAAAATTGAAAAGAAAAGTAAGAGATTGAAAAGAAAAGTAAGAG AAAAGAAAAAAAGAATGTATGTAAATGACACAAATATCTTTAATTAAAAATTAAATATGTTAATTAGATTTCTATCAAAA CAAACTATAATTTTAGAAATATTATAAAATAGTTATCATTATGTATTTTAAATACATTTTTATTTTATTTTTTTAAATCA CACAAAATACTCATCTCCTCACATGTTCTCTTCACATCACGGGAGAAAATACCCCACCATACATTTTCTCTTCTCTCCAT GTTTTCTATTGTATCAAAGAAGAGAAAAAAGCATCGAATTTTTTTTTTTTCAATTACATTTTCTTTTCTCTTTTCTTTAT CTCATGCACAAGCCCTTGTAGTCCACAATCAGTCTCACAAGTTGTTTACGGTAATTACAAATGAAATAATTAATATGTTC AGATGAACTTTTCTTTTACCACAATCAATTCTAAAATTCATAAACTACTTACAAACAATTTCCCCATAATTGATTCTAAT TTACCAATCATCAATTTTTCAAACATCTAATGTTCCTTCAACAATAATTTATAAACCACCAAATAGTATAAACACCTTAG AACACCTTTCACCTATTAGTCTCTCTCATCCCTTCATATATCCTCTAATTAATATTCTACACCACCTGAGTATACACTAT TCTTTATTCATATTCCTTCTTTCCTAAGCTAATAAATTATTTTTTTTCCCCGACATATACTTCTCAATGAAATAAAGAAT AGTAATAGAAGAATAGAGAATCATATGTCAAACTCACTGGGACGGTGCTTCATCTACACGTCACCAAACCGAAGAAAACG ACACCGACAGCGACCATAATGATGAGTGTCTTATTATCATTTATCATCATCGGATCTAATCTCATCTCATTCTCCGAACC AAAACGACACCAGACCAGACAATTCTCCGAACGCGGAGGCGGCGCCACGTGTCATTCACGTGTCCTCACCGCTTTCCCTG CGCGTGCGCGTCTTTTCGATTTCCTGATTTCTAACTATAAATAAATATGAGACTGGGTTTGGTGTCATTAAGCGTTATCA GTGGAGTGAGTCTGATATTTGCAGTGTTGAAAATGTCGCAGTTGTTGGATAAAGCCAAAGCCTTTGTTGCTGAGAAAGTG GCCAACATGCCTATGCCTGAGGCCAGTGTTACAGACGTTGACTTCAAGAAGGTGAGTCGCGAGTGTGTTGAGTACCTGGC TAAGATCTCTGTTTCCAACCCTTATTCAACACCGATTCCTATCTGTGAGATCAACTACACCCTCAAAAGTGCTGGCAGGT TGCTTCCTTTTCTCGATCTCTTCTTTCTTCTTGTTATTTTTAACGTTGATCATCTATTTATATGTGTTGGTTTTGATTTC AGATTCTTGTGTTTGATTTTGATATATTGTTTTGGTGAATTGTCTCGATGATCATGCATTGCTGATTGATTGGGTTCATT TTTTAATTGCAATTTGCAACTCATGGATCATGGATTATAGTTGTTGGGTTAACTATGCAGGATCTGTTTTTACTAATTTG TTTATTTGGTTGTTTTTTTTTCTTCTTCTTTGACGGTGCACCTATCAGTGCCGATGGCAAGACTAATTTAGTTCAAAGAC CAATGATTCATAAACCAACCATCAAATAGTGCACACATTTTGGAATAGTTTTTTTTTTCCTCTATATCTCATTCTTCTTA TTACATCACATCATATATCACATTTATTATTTATCTCTTCACTCTTCCTATATTTCTCTAATGGTCTATACCGTTTGAGA TAAGTGATAAGAAGATAAAAAGAGATAAGTGATAAATGTGATATATGATGTGATGTGATAAGAAAAAAAAAATTAGAAAA AAAAAAGTGTTCTGATGTATGCACTATTTGGTCTGGTGGTCTATGAATCAATGTTGTAGTTGGAAATAGTGTAACATTTA CTCTTAACTAGTGTTAGAAGAATTGAACCAAATTGATTGGCCCGACCAGGAGTCAAGATCCTGATTGGTTCAATTCACTC TCTCGTAACCGATATGGCAAATAATTTATCATAATCGGTCCAAAATCAGTAAAACCAATTAGAACCGAATAAAAATCGAT ATAAATGGGTTCAGTCATTTTCTTGTACTTTTCCGAGTTTCATTTATGCACACACATTCCTAAAATAAAAGGTTAAAAAT TTATGTATTGAAGATTAAAAATTTGATTTCTTTTACTATTGAAGGTTAAAAAGTTATATATCCTGTGTTATTTTCATCGT ATGTAATTATAAATGTATTTTTAAAAAATATTATTCGATCAATTATCGTTTTGGTTTAATTACGGTTAAATCTTTGATAC TTGATATTACCCAAAATATCATTGAATCTTGAATCAGTGTCTCAAGTGTTTGATAATCAAGTTCGAGTTCCATGAACACT CTATATCTTAATTTATTACTTTCGTGGGATTTGAATTTGTTAGCTTGCCTACTCCTTAACAAAACCTTGTTGGTGATTTG GTTATCTTTACTCATGTCTTAAAGAATTTCAATTTCAATAAATAATACTTTTGAATTTGATTTTCATATGCCTAATCATA TTTTTTGTTTGGACCTGGTAATTAATCAGGGAGATAGCATCAGGCACCATACCAGACCCAGGTTCACTGAAGGCAAGTGA CACAACACTGCTGGAAGTGCCGGTGAAGGTAGCTCACAGCATATTGCTGAGCATAGCAAAGGACATTGGTGCTGATTGGG ACATAGACTATCATTTGGATATTGGTCTTGTCATTGACCTCCCAGTCATTGGCAACTTCACCATTCCTCTTTCTCAGAAG GGAGAGATCAAGCTCCCAACCATCACTGACATGTTTGCCTAGCTAGCTCAACCACCACAACATGGGCTTAATTAGAGAAC AATAAAACAGATACACCCTGCATCTCATTTTCAGCTTTGTATCTTGAGTCACTAGCTATTTATTTTTCCCTTTGATTGTA CTTTGTTTGCCCTACACAAAAAGTTATATAGTACTAAATACATACTTCACAATAATACTAGTGTTTTTATCCGTGCGCTG CACGGCGAAAGATTTTTCTAAATTTTTTACGTTAATTTATTTTATATGAAATTGAACCGATTAACTGCTACAAAACCATA GATAACAATTGAAATTAAATTTGATTTGTTTGCACAACAATGAAATCCCAATTTAATCTAACAATGGGGGGAGGTTACAT AAATTTATAGAAGCACTAAAAAGAAAAATAGGATCCTTATGCATTCCACTTGTTGCTCGTTGACCCATCCTCATTCTTAG TTTATTGAATCTGCAAACAATTGGAAAATAGTTTAAATAAGACATTCAAATATACATCTCTCTACTTACAATGTGCATGA TACAAAGAAGTATGAAATCAAAGAAAAAACCAAATCAAGAAACACCACATAAAAATATTG
CDS sequence (LotjaGi1g1v0481800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTGTTGGATAAAGCCAAAGCCTTTGTTGCTGAGAAAGTGGCCAACATGCCTATGCCTGAGGCCAGTGTTACAGA CGTTGACTTCAAGAAGGTGAGTCGCGAGTGTGTTGAGTACCTGGCTAAGATCTCTGTTTCCAACCCTTATTCAACACCGA TTCCTATCTGTGAGATCAACTACACCCTCAAAAGTGCTGGCAGGGAGATAGCATCAGGCACCATACCAGACCCAGGTTCA CTGAAGGCAAGTGACACAACACTGCTGGAAGTGCCGGTGAAGGTAGCTCACAGCATATTGCTGAGCATAGCAAAGGACAT TGGTGCTGATTGGGACATAGACTATCATTTGGATATTGGTCTTGTCATTGACCTCCCAGTCATTGGCAACTTCACCATTC CTCTTTCTCAGAAGGGAGAGATCAAGCTCCCAACCATCACTGACATGTTTGCCTAG
Protein sequence (LotjaGi1g1v0481800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELLDKAKAFVAEKVANMPMPEASVTDVDFKKVSRECVEYLAKISVSNPYSTPIPICEINYTLKSAGREIASGTIPDPGS LKASDTTLLEVPVKVAHSILLSIAKDIGADWDIDYHLDIGLVIDLPVIGNFTIPLSQKGEIKLPTITDMFA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 150 | 150 | 2.5E-61 | – | |
PANTHER | 2 | 151 | 150 | 1.6E-82 | – | |
PANTHER | 2 | 151 | 150 | 1.6E-82 | – | |
SUPERFAMILY | 3 | 149 | 147 | 1.44E-50 | – | |
SMART | 23 | 140 | 118 | 1.1E-39 | ||
Pfam | 43 | 139 | 97 | 7.3E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Response to desiccation | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water. |
Expression pattern of LotjaGi1g1v0481800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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