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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR014101
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.046s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0245759.1
n.a. PREDICTED: prolycopene isomerase, chloroplastic-like [Cicer arietinum] gi|502122189|ref|XP_004497623.1| chr0 127422968 127430366 -
2 domain predictions
2 GO terms
LotjaGi5g1v0108300.1
n.a. Carotenoid isomerase; TAIR: AT1G06820.1 carotenoid isomerase; Swiss-Prot: sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic; TrEMBL-Plants: tr|A0A0B2PRP5|A0A0B2PRP5_GLYSO Prolycopene isomerase, chloroplastic; Found in the gene: LotjaGi5g1v0108300 LjG1.1_chr5 20633070 20655240 +
2 domain predictions
2 GO terms
LotjaGi5g1v0108300.3
n.a. Carotenoid isomerase; TAIR: AT1G06820.1 carotenoid isomerase; Swiss-Prot: sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic; TrEMBL-Plants: tr|A0A0R0L5D6|A0A0R0L5D6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0108300 LjG1.1_chr5 20633433 20640082 +
2 domain predictions
2 GO terms
LotjaGi5g1v0108300.6
n.a. Carotenoid isomerase; TAIR: AT1G06820.1 carotenoid isomerase; Swiss-Prot: sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic; TrEMBL-Plants: tr|A0A0B2PRP5|A0A0B2PRP5_GLYSO Prolycopene isomerase, chloroplastic; Found in the gene: LotjaGi5g1v0108300 LjG1.1_chr5 20633433 20640082 +
2 domain predictions
2 GO terms
LotjaGi5g1v0108300.7
n.a. Carotenoid isomerase; TAIR: AT1G06820.1 carotenoid isomerase; Swiss-Prot: sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic; TrEMBL-Plants: tr|I1JGC5|I1JGC5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0108300 LjG1.1_chr5 20634505 20640082 +
2 domain predictions
2 GO terms
LotjaGi5g1v0108300.8
n.a. Carotenoid isomerase; TAIR: AT1G06820.1 carotenoid isomerase; Swiss-Prot: sp|Q8S4R4|CRTSO_SOLLC Prolycopene isomerase, chloroplastic; TrEMBL-Plants: tr|A0A0B2PRP5|A0A0B2PRP5_GLYSO Prolycopene isomerase, chloroplastic; Found in the gene: LotjaGi5g1v0108300 LjG1.1_chr5 20634729 20640082 +
2 domain predictions
2 GO terms