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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR015944
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.895s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0101519.1
n.a. PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like isoform X2 [Cicer arietinum] gi|502173505|ref|XP_004515345.1| chr0 43071373 43080702 -
3 domain predictions
5 GO terms
Lj0g3v0101519.2
n.a. PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like isoform X2 [Cicer arietinum] gi|502173505|ref|XP_004515345.1| chr0 43073007 43080702 -
3 domain predictions
5 GO terms
Lj1g3v0052050.1
n.a. PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like isoform X2 [Cicer arietinum] gi|502173505|ref|XP_004515345.1| chr1 312310 315785 -
3 domain predictions
5 GO terms
LotjaGi3g1v0067600.1
n.a. Glycine-tRNA ligase, alpha subunit; TAIR: AT3G48110.1 glycine-tRNA ligase; Swiss-Prot: sp|Q8L785|SYGM2_ARATH Glycine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|K7KEC9|K7KEC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0067600 LjG1.1_chr3 7354732 7390138 +
5 domain predictions
5 GO terms
LotjaGi3g1v0067600.2
n.a. glycine-tRNA ligase; TAIR: AT3G48110.1 glycine-tRNA ligase; Swiss-Prot: sp|Q8L785|SYGM2_ARATH Glycine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|K7KEC9|K7KEC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0067600 LjG1.1_chr3 7355025 7389209 +
5 domain predictions
5 GO terms
LotjaGi3g1v0067600.3
n.a. Glycine-tRNA ligase, beta subunit; TAIR: AT3G48110.1 glycine-tRNA ligase; Swiss-Prot: sp|Q8L785|SYGM2_ARATH Glycine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|K7KEC9|K7KEC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0067600 LjG1.1_chr3 7356601 7389209 +
6 domain predictions
5 GO terms