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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016089
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We have found 13 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.635s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj5g3v2288900.1
n.a. chalcone isomerase [Lotus japonicus] gi|28804193|emb|CAD69022.1| chr5 33406046 33407230 +
2 domain predictions
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LotjaGi1g1v0307100.1
n.a. Chalcone-flavonone isomerase family protein; TAIR: AT5G05270.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q8VZW3|CFI3_ARATH Probable chalcone--flavonone isomerase 3; TrEMBL-Plants: tr|I3STD3|I3STD3_LOTJA Chalcone-flavonone isomerase family protein; Found in the gene: LotjaGi1g1v0307100 LjG1.1_chr1 74817333 74820984 +
2 domain predictions
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LotjaGi1g1v0307100.2
n.a. Chalcone-flavonone isomerase family protein; TAIR: AT5G05270.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q8VZW3|CFI3_ARATH Probable chalcone--flavonone isomerase 3; TrEMBL-Plants: tr|I3STD3|I3STD3_LOTJA Chalcone-flavonone isomerase family protein; Found in the gene: LotjaGi1g1v0307100 LjG1.1_chr1 74817959 74819892 +
2 domain predictions
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LotjaGi1g1v0718400.1
n.a. Chalcone--flavonone isomerase; TAIR: AT3G63170.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q9M1X2|FAP1_ARATH Fatty-acid-binding protein 1; TrEMBL-Plants: tr|A0A072U3N8|A0A072U3N8_MEDTR Chalcone-flavanone isomerase family protein; Found in the gene: LotjaGi1g1v0718400 LjG1.1_chr1 128697539 128700729 +
2 domain predictions
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LotjaGi3g1v0255900.1
n.a. Chalcone-flavonone isomerase family protein; TAIR: AT1G53520.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q9C8L2|FAP3_ARATH Fatty-acid-binding protein 3, chloroplastic; TrEMBL-Plants: tr|Q53B73|Q53B73_SOYBN Chalcone-flavonone isomerase family protein; Found in the gene: LotjaGi3g1v0255900 LjG1.1_chr3 43911158 43915923 +
2 domain predictions
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LotjaGi5g1v0045100.1
n.a. Chalcone--flavonone isomerase; TAIR: AT2G26310.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q84RK2|FAP2_ARATH Fatty-acid-binding protein 2; TrEMBL-Plants: tr|A0A1J7HHH4|A0A1J7HHH4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0045100 LjG1.1_chr5 7613748 7619708 +
2 domain predictions
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LotjaGi5g1v0359200.1
n.a. Chalcone-flavonone isomerase family protein; TAIR: AT3G55120.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q8H0F6|CFI3_LOTJA Chalcone--flavonone isomerase 3; TrEMBL-Plants: tr|I3SKD9|I3SKD9_LOTJA Chalcone-flavonone isomerase family protein; Found in the gene: LotjaGi5g1v0359200 LjG1.1_chr5 67390181 67395249 +
2 domain predictions
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LotjaGi5g1v0359200.2
n.a. Chalcone-flavonone isomerase family protein; TAIR: AT3G55120.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q8H0F6|CFI3_LOTJA Chalcone--flavonone isomerase 3; TrEMBL-Plants: tr|I3SKD9|I3SKD9_LOTJA Chalcone-flavonone isomerase family protein; Found in the gene: LotjaGi5g1v0359200 LjG1.1_chr5 67390181 67395249 +
2 domain predictions
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LotjaGi5g1v0359200.3
n.a. Chalcone-flavonone isomerase family protein; TAIR: AT3G55120.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q8H0G2|CFI1_LOTJA Chalcone--flavonone isomerase 1; TrEMBL-Plants: tr|I3SU15|I3SU15_LOTJA Chalcone-flavonone isomerase family protein; Found in the gene: LotjaGi5g1v0359200 LjG1.1_chr5 67390181 67395249 +
2 domain predictions
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LotjaGi5g1v0359230.1
n.a. Chalcone-flavonone isomerase family protein; TAIR: AT3G55120.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q8H0F6|CFI3_LOTJA Chalcone--flavonone isomerase 3; TrEMBL-Plants: tr|I3SKD9|I3SKD9_LOTJA Chalcone-flavonone isomerase family protein; Found in the gene: LotjaGi5g1v0359230 LjG1.1_chr5 67390287 67391829 +
2 domain predictions
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LotjaGi5g1v0359260.1
n.a. Chalcone-flavonone isomerase family protein; TAIR: AT3G55120.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q8H0G2|CFI1_LOTJA Chalcone--flavonone isomerase 1; TrEMBL-Plants: tr|I3SU15|I3SU15_LOTJA Chalcone-flavonone isomerase family protein; Found in the gene: LotjaGi5g1v0359260 LjG1.1_chr5 67393483 67394919 +
2 domain predictions
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LotjaGi5g1v0359300.1
n.a. Chalcone-flavonone isomerase family protein; TAIR: AT3G55120.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q8H0G2|CFI1_LOTJA Chalcone--flavonone isomerase 1; TrEMBL-Plants: tr|I3SU15|I3SU15_LOTJA Chalcone-flavonone isomerase family protein; Found in the gene: LotjaGi5g1v0359300 LjG1.1_chr5 67400904 67402147 +
2 domain predictions
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LotjaGi5g1v0359350.1
n.a. Chalcone-flavonone isomerase family protein; TAIR: AT3G55120.1 Chalcone-flavanone isomerase family protein; Swiss-Prot: sp|Q8H0G1|CFI2_LOTJA Chalcone--flavonone isomerase 2; TrEMBL-Plants: tr|I3T2D9|I3T2D9_LOTJA Chalcone-flavonone isomerase family protein; Found in the gene: LotjaGi5g1v0359350 LjG1.1_chr5 67402703 67404660 -
2 domain predictions
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