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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016295
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.556s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v4957560.1
n.a. PREDICTED: proteasome subunit beta type-4-like [Cicer arietinum] gi|502113510|ref|XP_004494673.1| chr1 60410106 60426137 -
3 domain predictions
1 GO term
Lj1g3v4957560.3
n.a. PREDICTED: proteasome subunit beta type-4-like [Cicer arietinum] gi|502113510|ref|XP_004494673.1| chr1 60421239 60426137 -
3 domain predictions
1 GO term
LotjaGi1g1v0778500.1
n.a. Proteasome subunit beta type; TAIR: AT1G56450.1 20S proteasome beta subunit G1; Swiss-Prot: sp|Q7DLR9|PSB4_ARATH Proteasome subunit beta type-4; TrEMBL-Plants: tr|A0A0S3S5A0|A0A0S3S5A0_PHAAN Proteasome subunit beta type; Found in the gene: LotjaGi1g1v0778500 LjG1.1_chr1 135051257 135056715 -
4 domain predictions
1 GO term
LotjaGi2g1v0362800.1
n.a. Proteasome subunit beta type; TAIR: AT1G56450.1 20S proteasome beta subunit G1; Swiss-Prot: sp|Q7DLR9|PSB4_ARATH Proteasome subunit beta type-4; TrEMBL-Plants: tr|I1NC65|I1NC65_SOYBN Proteasome subunit beta type; Found in the gene: LotjaGi2g1v0362800 LjG1.1_chr2 86023353 86028460 +
4 domain predictions
1 GO term
LotjaGi2g1v0362800.2
n.a. Proteasome subunit beta type; TAIR: AT1G56450.1 20S proteasome beta subunit G1; Swiss-Prot: sp|Q7DLR9|PSB4_ARATH Proteasome subunit beta type-4; TrEMBL-Plants: tr|I1NC66|I1NC66_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0362800 LjG1.1_chr2 86023474 86027881 +
3 domain predictions
1 GO term
LotjaGi2g1v0362800.3
n.a. Proteasome subunit beta type; TAIR: AT1G56450.1 20S proteasome beta subunit G1; Swiss-Prot: sp|Q7DLR9|PSB4_ARATH Proteasome subunit beta type-4; TrEMBL-Plants: tr|I1NC66|I1NC66_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0362800 LjG1.1_chr2 86024428 86027881 +
3 domain predictions
1 GO term