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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018522
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.918s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v0826110.1
n.a. PREDICTED: DNA topoisomerase 2-like [Glycine max] gi|356555329|ref|XP_003545986.1| chr3 10464707 10471344 +
2 domain predictions
4 GO terms
Lj4g3v1154490.2
n.a. PREDICTED: two-component response regulator-like APRR2-like isoform X1 [Cicer arietinum] gi|502152594|ref|XP_004508999.1| chr4 17428155 17436114 -
2 domain predictions
4 GO terms
LotjaGi1g1v0663600.1
n.a. DNA gyrase subunit B; TAIR: AT5G04130.1 DNA GYRASE B2; Swiss-Prot: sp|Q5YLB4|GYRB_NICBE DNA gyrase subunit B, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A151TTM7|A0A151TTM7_CAJCA DNA gyrase subunit B; Found in the gene: LotjaGi1g1v0663600 LjG1.1_chr1 122488334 122504884 -
2 domain predictions
4 GO terms
LotjaGi3g1v0121000.1
n.a. DNA topoisomerase 2; TAIR: AT3G23890.1 topoisomerase II; Swiss-Prot: sp|O24308|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr|I1MJQ7|I1MJQ7_SOYBN DNA topoisomerase 2; Found in the gene: LotjaGi3g1v0121000 LjG1.1_chr3 14822816 14830581 +
2 domain predictions
4 GO terms
LotjaGi3g1v0121000.2
n.a. DNA topoisomerase 2; TAIR: AT3G23890.2 topoisomerase II; Swiss-Prot: sp|O24308|TOP2_PEA DNA topoisomerase 2; TrEMBL-Plants: tr|I1MJQ7|I1MJQ7_SOYBN DNA topoisomerase 2; Found in the gene: LotjaGi3g1v0121000 LjG1.1_chr3 14823082 14830141 +
2 domain predictions
4 GO terms
LotjaGi4g1v0190400.1
n.a. Two-component response regulator-like protein; TAIR: AT4G18020.1 CheY-like two-component responsive regulator family protein; Swiss-Prot: sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2; TrEMBL-Plants: tr|A0A072V0B2|A0A072V0B2_MEDTR Two-component response regulator-APRR2-like protein; Found in the gene: LotjaGi4g1v0190400 LjG1.1_chr4 43626049 43634172 -
2 domain predictions
4 GO terms
LotjaGi4g1v0190400.2
n.a. Two-component response regulator-like protein; TAIR: AT4G18020.1 CheY-like two-component responsive regulator family protein; Swiss-Prot: sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2; TrEMBL-Plants: tr|A0A072UR72|A0A072UR72_MEDTR Two-component response regulator-APRR2-like protein; Found in the gene: LotjaGi4g1v0190400 LjG1.1_chr4 43626049 43634172 -
2 domain predictions
4 GO terms
LotjaGi4g1v0190400.3
n.a. Two-component response regulator-like protein; TAIR: AT4G18020.1 CheY-like two-component responsive regulator family protein; Swiss-Prot: sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2; TrEMBL-Plants: tr|A0A072UR72|A0A072UR72_MEDTR Two-component response regulator-APRR2-like protein; Found in the gene: LotjaGi4g1v0190400 LjG1.1_chr4 43626358 43634097 -
2 domain predictions
4 GO terms