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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1154490 |
| Transcript ID | Lj4g3v1154490.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: two-component response regulator-like APRR2-like isoform X1 [Cicer arietinum] gi|502152594|ref|XP_004508999.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 532 | 531 | 0 | – | |
| PANTHER | 2 | 532 | 531 | 0 | – | |
| SUPERFAMILY | 16 | 134 | 119 | 9.39E-14 | ||
| Gene3D | 16 | 163 | 148 | 4.50E-14 | – | |
| ProSiteProfiles | 19 | 132 | 114 | 18.219 | ||
| Pfam | 20 | 126 | 107 | 5.80E-07 | ||
| CDD | 21 | 131 | 111 | 2.34E-06 | – | |
| ProSitePatterns | 22 | 30 | 9 | – | ||
| MobiDBLite | 183 | 202 | 20 | – | – | |
| MobiDBLite | 207 | 229 | 23 | – | – | |
| MobiDBLite | 266 | 298 | 33 | – | – | |
| ProSiteProfiles | 306 | 365 | 60 | 14.692 | ||
| Gene3D | 307 | 366 | 60 | 3.30E-26 | ||
| SUPERFAMILY | 308 | 366 | 59 | 3.23E-17 | ||
| TIGRFAM | 309 | 364 | 56 | 1.20E-23 | ||
| Pfam | 312 | 361 | 50 | 3.40E-07 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA topoisomerase type II (ATP-hydrolyzing) activity | Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA topological change | The process in which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number. |
Expression pattern of Lj4g3v1154490.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1154490.2, powered by CORGI.
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