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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019815
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.721s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0325919.1
n.a. PREDICTED: translation initiation factor IF-3-like [Glycine max] gi|356574143|ref|XP_003555211.1| chr0 170330631 170335685 -
4 domain predictions
1 GO term
Lj4g3v2000890.1
n.a. PREDICTED: translation initiation factor IF-3-like [Fragaria vesca subsp]. vesca] gi|470101371|ref|XP_004287146.1| chr4 27802978 27808238 +
4 domain predictions
1 GO term
LotjaGi4g1v0289600.1
n.a. Translation initiation factor IF-3; TAIR: AT2G24060.1 Translation initiation factor 3 protein; Swiss-Prot: sp|Q3MBH6|IF3_ANAVT Translation initiation factor IF-3; TrEMBL-Plants: tr|A0A0L9TQN7|A0A0L9TQN7_PHAAN Translation initiation factor IF-3; Found in the gene: LotjaGi4g1v0289600 LjG1.1_chr4 66200075 66210557 +
2 domain predictions
1 GO term
LotjaGi5g1v0349600.1
n.a. Translation initiation factor IF-3; TAIR: AT1G34360.1 translation initiation factor 3 (IF-3) family protein; Swiss-Prot: sp|Q9K867|IF3_BACHD Translation initiation factor IF-3; TrEMBL-Plants: tr|A0A1J7HIQ2|A0A1J7HIQ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0349600 LjG1.1_chr5 66524154 66530782 -
2 domain predictions
1 GO term
LotjaGi5g1v0349600.2
n.a. Translation initiation factor IF-3; TAIR: AT1G34360.1 translation initiation factor 3 (IF-3) family protein; Swiss-Prot: sp|Q9K867|IF3_BACHD Translation initiation factor IF-3; TrEMBL-Plants: tr|A0A1J7HIQ2|A0A1J7HIQ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0349600 LjG1.1_chr5 66524558 66530791 -
2 domain predictions
1 GO term
LotjaGi5g1v0349600.3
n.a. Translation initiation factor IF-3; TAIR: AT1G34360.1 translation initiation factor 3 (IF-3) family protein; Swiss-Prot: sp|Q9K867|IF3_BACHD Translation initiation factor IF-3; TrEMBL-Plants: tr|A0A1J7HIQ2|A0A1J7HIQ2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0349600 LjG1.1_chr5 66524561 66530798 -
2 domain predictions
1 GO term