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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR021039
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.614s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj6g3v1915840.1
n.a. 4Fe-4S ferredoxin, iron-sulfur binding [Medicago truncatula] gi|124359951|gb|ABN07967.1| chr6 21514216 21520000 -
2 domain predictions
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Lj6g3v1915840.2
n.a. 4Fe-4S ferredoxin, iron-sulfur binding [Medicago truncatula] gi|124359951|gb|ABN07967.1| chr6 21516422 21520000 -
2 domain predictions
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Lj6g3v1915840.3
n.a. 4Fe-4S ferredoxin, iron-sulfur binding [Medicago truncatula] gi|124359951|gb|ABN07967.1| chr6 21516422 21520000 -
2 domain predictions
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LotjaGi6g1v0258700.1
n.a. NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700 LjG1.1_chr6 57160513 57168017 +
2 domain predictions
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LotjaGi6g1v0258700.2
n.a. NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700 LjG1.1_chr6 57160513 57168017 +
2 domain predictions
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LotjaGi6g1v0258700.3
n.a. NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700 LjG1.1_chr6 57160513 57168017 +
2 domain predictions
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LotjaGi6g1v0258700.4
n.a. NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700 LjG1.1_chr6 57160688 57168188 +
2 domain predictions
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LotjaGi6g1v0258700.5
n.a. NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700 LjG1.1_chr6 57160703 57167889 +
2 domain predictions
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LotjaGi6g1v0258700.6
n.a. NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700 LjG1.1_chr6 57160703 57167889 +
2 domain predictions
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LotjaGi6g1v0258700.7
n.a. NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700 LjG1.1_chr6 57160741 57167842 +
2 domain predictions
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