Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0258700 |
| Transcript ID | LotjaGi6g1v0258700.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57160703..57167889) extracted from Lotus japonicus Gifu genome v1.2.
CCACTCAGAACAGTCACTTGGAGTGTTTGATGCTGGGAATGGCTCTGAGATGTTTCTGCGCCCCAGATATTCCAACTCAG TACCAAAACCATGGTTCTTCCCTGCTAAAACCTTTTTTACTTGTCTCTTCTTTTTCTCTCTCTAACATACTCATAAAATT TGAAAATTTCCAGTGAAATTGGAACAGAGAAGCAGCAATAAGAAGTGTCTTCAGAATGTGAAGAGTCTGGTCAACACTAT TGAGCTTCCATCCATTTCATCTTCTCCACTTGAGTCTCTTCAGAGAGGCAACTGGGTCAAGCTCATTTGTGGTGCAAGCT TTGAGGTAATGCAAATTTTCATAAACAAACCCAACCATGCTCTTCCTTTTTATTTGTTTTAACTTGTAAGTGATTTTAAC CCCCTCTCTCTCTCTCTTTCTAGGATGTTGTTGATATCAGAAATCTCAGTTTGGTTTACACTCTTGCTGGAGGTAAGGTA TTATATACTTATGATTTGTTTGAGAATAATGAAAATAAGCAGAAAATTGTATATGCATGATAATTAGAAAATTATCTATG TCTATTGGTGTTCTTGTTATTTTTTCAGCTATGCAAACTTGATATTTTGAGGAACTAATGAGTAAGGAATATCATGTGAG TTAAATTGGATTATATATGGATGCAGTTGACTGCATTGACTGCGCTGCTGATGCTTCGGTTGTCAGCGCTGTGAATGAAG GAATTGAAGCTGCAAGAGATATATTATGCATTCGAAGGCCGTGGGTGATGATCAGTGTCAATGATGACAAAGACCTTCAC TTTCGTAAGGCTGGTAGGGCAATCAGTTCTATGGAGCTTCATTGTTGTATTTGTGTTTTCTATGTATTATATTTCAGCAA CTCTATAGGTCAGAAATCTTGTGATATAGTTTGATATTCAAATATACTAGTTTAAGTGCAAAATTTAATGAACATAAAGC TCAGTCTATCACATATTGGCAATTCATGCTAATTGCTAGTAATGCCTTCTGAACAGAATTTGATCCAGAGGACTGTCCAG CAGACTGTTCACGGCCTTGTGAAAATGTGTGCCCTGCTAATGCAATATCATTCCAACGAAAACCTAATGTTGGAAATATG ATGTTGGAAAACCTAAAGGTTTTAACTTGATTTTACTTAAATTTTTAAAGGTGATTTTGTCAAACGTTCAAGCTTCATTT CCACAAAACAGAACTTGTAATATTCAATTGGCTTGAACGTGCAGGATGGAGTCATCACTGAACGCTGCTATGGCTGTGGT CGCTGTCTTCCAGTTTGCCCCTATGATAAAATTAGTGAGATACTTTCCAGTTCAATCTGAGAATATCAGTTCTTAATATT CTCTTAATAATTTATTTCAAATATGTTAGTTAGTATCTCTGTGATATTTTTTAATTTTAGACAATATAAACTTTCCACAA TTGTCCAGGAGAGGTAACATATGTTAGAGATGCTATCACAACTGCTGATCTCATCAAAAGAAATGATGTTGATGCTATGG AGATACACACAAGTGGGAGGTAATATTACAGATTAAATTGATCATGTCATATAATACTAGGATATAACTGTAATCACTCT AGTAATATGTTTCGTGATTGCTATGTCCATAATTTTATCAATCAAGTAATGAAAGTATGATTCTCAATTCTCATATACAT GTAATGCATTTAGTGTTCACCAAGCTTTCTATGCTTGAGGCACAGCACAACCATGTTCTCTTAGATTGCTTGTCTCTTTT CTTCTATTTTATCAGAGGGAAATGATTTGGAATAATTCAACAGATTATATGCAAAGACCAAATCTTAGTTTTCAATAACT TGAAATCTTAATATGCTATTTCTACGATGTTTGATTGACATCTCTAATCCATTTCCTCATCTGACATATGATCCCTCTAA AGGCAGAGTACACTGTTCGAAGAACTCTGGTATGCTCTAGGAGACACAGTACAAAATTTGAAGCTAATAGCAGTAAGTGG TGCCTTCAGCCTGTTCTAATATTTAAGAGGGTATAAGTAATACCTTTCTACAATAACTTAGCCTCTACGCTTTTTCCATT TGATTCAACAATTTATTATTAAAATGGTCCAGGTTAGCTTACCTAATAATGGGGATTCAACAATATCCTCCATGAACAAA ATGTTCTCTATTATGAAACCCAGTCTTCGAGGCTTCAACTTATGGCAGGTGCACCCTTTCTCTTTATTCAACTGTTTGAA CAACTTCAAATGTTAGTGAGCCAAAATTTATTCTATAACAAATCCATCTTTGCCTTATATGAAGTTAGATGGCCGTCCCA TGAGTGGAGATATTGGGAGAGGAGCCACTAAGGAATCAATTGTGTTTGCTGCTCATTTGACTAAAGCAAAAGATAGACCT CCAGGTCTGTATCAATAATAATTCGATCTATGCCCCCTTGAAAGCTATATCTATCCTAATTCTGCTAATGTTTCAGCACC TTAACATGGTAGGTTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATAGATGGGTTGAAAAAAGAGGGACTCTTT CAAACAACTATAACCGGTAATGTTGCCACTTTGTGACTTTGTACATTCTCTTGTTATCACTCCTTTCTCCATTGCATTAA AATGAACCTTCTTTTTTGGTTCCTAGAGTACCTAGATGATGAAATGTCAACAATCAGCTCATCTAATTCATCACATGTTT TAATTAGTGGCATAGCTTACGGTGGCTACGCACGGAAGGTAACACATGATTGATGCCCTTCTTTCATTAATTTTCCATGT TTTTACTATGACCGCGTGTGGAAGGGTTTATTAGAGTTTATCTTATGGCATAAGTGCTTATGCAAGTGTTTGGGTGAGCT TATGAAAATAGCTAGTGACCTACCTATAAGCTGTTTTGAGTTCATTATCATAAGCTGCGCAGATTAGCTTATGAATAAGC ACTATACCTACCTATTTTGAGCTTATTTCAATTAACTTATCAAATTAGCTTATGAATAAGTATGTATGTGATAAACACTT AATTAAGTTGTTTACCCAAACACATCCTATATGTAGTTACATAAAAGTATAGATGTGAGTCGCATCATGGGACTCCGGCA TGTCAATTTATCCAATCTTACTATGTACATCTTTGTTCAGATTGTTGGTAGAGTATTGCGATCCATGCAGACCCAACATG GTGGAGCTGCTTCGATTGAGGATCATCCGGAGCATCTCTTGATGGCTCTTAGGGAAGCACTTGCATTGGTTGGACCTGTT AAAAATGTCTGTGATCCATGACAACCTCACAGTTTAAGTACTTTCTTTCATGCAGCAATATGCATAATAGTCTTTCGATA GTAGTCAATACTAATAGGTTCTGTAGCTTGATGCTTTCGTGCAATGCATGAGCAAGACATAGCAAGTTGAGGTTGGATCA ATGTATATTTTGGTCTAAAATAAAGTTCAAGATAAGACCTTTTTAAATAGAACTTGAACTTACCTTTGAACCTTGCAGTT GTATCCTAACTTCCTATTTAAAAGCATTTGTCAATGTTAAGCAAAATCGAGGGTTTATTTCAGGTTCAAGAAATCATCTT AAGTTATCACCTTTTAAAGCTAATAAGATAATTAAAACTCAAACCAAGTTGTGTTATCACTTGTTTATTGCTTTGTTTGG AGATTTCAGGGCTCATTGAACAAGACAGATTCCCCATGTTATGGATATTTTACTTAAACATGGGTCATCAGTTTGCTGAA TTTGACAATGCAAGCTTTTATCATTTTCATTCACCTTTAAGGAATATCAATTCTAATCATTGGAGAATATATAAAAATGT AAATACCATGTATATTTCTGTAAACAATTGTTGTATAAATTTTGTCTGCGAAAGCATCAGTCTCCCTAGTGTAACAGCTA TTGGCTAATTCAATCATAAATTTGAAATATATGTACTTATTGATAGGGTATGAAAATGACTAAATGAGATATAAATTTCT GTGTAAACAATAATTTTAATATTCTACATATATTAATCTTATCGTTTAAAGCAAGTTGAAGTTAATTTTGTTTTTTGATA ATATTCAATAATACATAACACAGATTGTCAAGAGGGTAAAGTGTCCTTTGGAGCTCACGCTGATTTACTCATCAAAATTT ACCACGTGTCACATCACAGGTGGCTCTGGAAGTGATATTTTTCAAATCAAAATCTCTTAAGTGTTGTGTTATATGTCCCC ACCATGTTTAAGGAATGCAAAACCTCCCTTTAAGGTTGTTGTTTCTCGAATAATATTTAAGGGTAGAGAGGAGAGTTAAT GTCTCACACCCCAACAAAGAAAAAGCTCAAATCTAATATGGATGTGAATATGGAGAATTCAGGAGCTGAAAGTAATGGTT CTCATGCAAAGAATCAGGCATTAAGGGATGTTGCGGTTAAAGAAACATTTGACAAATTGGTCAGTTCAGTTCCATATCTT CAATGTATAATGGAGATTTCTACTTTTCTCTCCTCTCCCTTTGTGCACAATATTTGGCTCTATCTTTTGTTAGGTTGAAG AAGAAAGGAAGAAGATGGTCCCACTGAAGGAAACAACTCCTCCACCAATCCTTGAAGCTGCAATTAAGAATGGAAATGTC CGGGCACCAACTCATATTACTTCCACCATTTGTGATGAAAGAGGTACTATACTAATATACTAATGTTGTACATGTGATTT AGAAACTGTGTGTCTCTCTTTTTGATAAAGTTTTGTTTTTGGAAGGTGAGGTGCCATTATATGCTGGTGTACCCTTGTCT TCCATTATTGAAAAGGGTTATGGCATTGGTGATGTTATCTCTCTTCTCTGGTTCAAACGCAGCCTTCCCCGTTACTGTAC TCAATTTATTGAGGTATGTGCAGTGCTTTCCGGCAATGTTTTTCCCCATTATTTCTGTTTATGTTTTTCACTGGAGTATT TGAAATTGTTATACACTCTATAAAGAAGTTTCTTCAAAATTTTCTACTCAGTTTTCCATTTAGTATTTCTTTTCAAAACA AACAATTGATATATCATCTTCCAGTTTCTATGGTGCTAATGTATTATTACATTGGTCAGATGTGCATCATGTTATGTGCC GACCATGGTCCTTGCGCCTCTGGTGCTCACAATACTATTGTGACAGCAAGGGCTGGGAAGGACCTGATTTCTAGTCTAGT ATCAGGTAAACACTAAATACATGCCTCTCGGTGCGTCTACTTCTGAAGCAGACTTAGTGTGTTTGGATACCAGTTAAGTT TGATTGAGCGGGCTTTTATTATAATCCCATAAGAAAAGTTCTGTCCATTTTTTTTTTCTTGAAGTGTGCTAATATACATT GGCACAATGGCACTGATGTAAACATATATCCAAACATAGTCTTACTATATTGTGGGATGACCAAAACTTTCTGAAACAGG TTTGCTTACAATTGGTCCTCGATTTGGCGGTGCCATTGATGATGCAGCTCGCTACTTCAAGGATGCTCATGACAGGGTAT AATATGAGTAATTTTCCAACAAAGCTGGATGGAACTAGCCAACTAAAATATAATTGGGGAGAGGGGTTGTAAAGAAACTA ATCCTAATGAGATATTACATTCTAAGTGAAAATCAGAAACTCCATACAAACATGTACTTTGTCTTTCATCTAGCATGTGG TGCTATTATTATGTACTTTGTCTTGTCTCAGGGGCTTACGCCTGATGAGTTTGTTGAAAGCATGAAGAAGAAAGGAATTC GCGTGCCAGGAATAGGGCACAGGTAATGAATGTAATTTTGATCATTCACTAAGTAGTAGTTCTGTTTCTGTTGCTATGAA AAATGAAAATTTATGAGACTTGGTTTTGCTTTGTTAACAGGGTCAAGAATAAGGACAAGAAAGATAAGAGAGTTGAGATG CTACAGAAGTTTGCACGGGCGCATTTTCCTTGTGTGAAATACATGGAATATGCTGTTCAAGTTGAAGATTACACCCTCTC AAAGTCAAATAAATTAATTCTCAATATTGATGGTGCCATTGCATCTCTTTTCTTGGATCTTCTGGCTGGTTGTGGAATGT TCACAGAGCAAGAGATCAGTGAAATTGTGGAGATTGGCTATCTGAATGGGCTCTTTGTGCTGGCACGCTCCATTGGTCTG ATTGGGTGAGTTTAAATTAGTCAATAGGTACATATTTCATGTGAATTGGACATTATTGAAGTTTTGGAATTTTGTCCCTT TTTTATCCACAATTCTCTTGTGGTCCATGGAGTTACACTTTCATTTAGGCGGTCCTCACAGTCATTAATATTGGTTGTTG AGTGGTTACCAACACTAGATATTGAAATTCAGATTTCCTGCTGTCTAGAAAGTCAGTGTAAACCCTAAACTCTGTTTTGA GGGCATAGTAGACCTTTTTAAATTGAGTCGTCCGATCCCTAATTCCTAGCACCTGGGAGTGCATAGTAGACCTTTTTAAA TCGGAGTCGTCCGATCCTTGATTCCCAGTACCTGGATAAGTGAAATGAGGAATCTGACGACTCTGATTTAAAGAAATATG CGGTAAACTTAAAATCAAAGTTGAGGGTTTACACTGACTTCATTGAATTCAAAACTCTCTTAGTGCGGGAGTGAGTAGAT ATTACATGTCTTATATATGATGGGACTCACATAAATTTCAACTGATAAAATAGAATGCTGGAAATAGAACGTAAAAGTGA GTGTTAAGGTACCGCTCCTTAAAAAACCAATTATACATGGTTTGGTCTAGTTGATTGATCCTTGTTTAAAATTTCAGCCA TGCCTTTGACCAAAAGAGATTGAAGCAACCCCTCTACCGCCACCCATGGGAGGATGTTCTCTACACAAATTGAGAAGGTT CTGTGTTATGGCTGGCTGGAAAACTTCGCTTCGTTTCAGATTAGGAATCTGTTGAGAAATCATGCATCTCAAGTATCCTG GAATAAATTTTTTAGATGTTAGAGTAGTGTTGCCATCAGTAAGTTGAAACGAACAAATTCACTGTCAAATTTGAAATTAC TACTGTAATTCTCTTGGTGAAGATGTTGAAGTAAATGATTGCCAAGTTCAAGAGCTTTTAATTCTGCTAAATAACGTTGT TAATTAATCTGACTGCATCAGCATGTATTGCGTTTATTACTTCTTTATTCATAGAGTATATAGCCGA
CDS sequence (LotjaGi6g1v0258700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGGGAATGGCTCTGAGATGTTTCTGCGCCCCAGATATTCCAACTCAGTACCAAAACCATGTGAAATTGGAACAGAG AAGCAGCAATAAGAAGTGTCTTCAGAATGTGAAGAGTCTGGTCAACACTATTGAGCTTCCATCCATTTCATCTTCTCCAC TTGAGTCTCTTCAGAGAGGCAACTGGGTCAAGCTCATTTGTGGTGCAAGCTTTGAGGATGTTGTTGATATCAGAAATCTC AGTTTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGCGCTGCTGATGCTTCGGTTGTCAGCGCTGTGAATGAAGG AATTGAAGCTGCAAGAGATATATTATGCATTCGAAGGCCGTGGGTGATGATCAGTGTCAATGATGACAAAGACCTTCACT TTCGTAAGGCTGAATTTGATCCAGAGGACTGTCCAGCAGACTGTTCACGGCCTTGTGAAAATGTGTGCCCTGCTAATGCA ATATCATTCCAACGAAAACCTAATGTTGGAAATATGATGTTGGAAAACCTAAAGGATGGAGTCATCACTGAACGCTGCTA TGGCTGTGGTCGCTGTCTTCCAGTTTGCCCCTATGATAAAATTAGAGAGGTAACATATGTTAGAGATGCTATCACAACTG CTGATCTCATCAAAAGAAATGATGTTGATGCTATGGAGATACACACAAGTGGGAGGCAGAGTACACTGTTCGAAGAACTC TGGTATGCTCTAGGAGACACAGTACAAAATTTGAAGCTAATAGCAGTTAGCTTACCTAATAATGGGGATTCAACAATATC CTCCATGAACAAAATGTTCTCTATTATGAAACCCAGTCTTCGAGGCTTCAACTTATGGCAGTTAGATGGCCGTCCCATGA GTGGAGATATTGGGAGAGGAGCCACTAAGGAATCAATTGTGTTTGCTGCTCATTTGACTAAAGCAAAAGATAGACCTCCA GGTTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATAGATGGGTTGAAAAAAGAGGGACTCTTTCAAACAACTAT AACCGAGTACCTAGATGATGAAATGTCAACAATCAGCTCATCTAATTCATCACATGTTTTAATTAGTGGCATAGCTTACG GTGGCTACGCACGGAAGATTGTTGGTAGAGTATTGCGATCCATGCAGACCCAACATGGTGGAGCTGCTTCGATTGAGGAT CATCCGGAGCATCTCTTGATGGCTCTTAGGGAAGCACTTGCATTGGTTGGACCTGTTAAAAATGTCTGTGATCCATGA
Protein sequence (LotjaGi6g1v0258700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGMALRCFCAPDIPTQYQNHVKLEQRSSNKKCLQNVKSLVNTIELPSISSSPLESLQRGNWVKLICGASFEDVVDIRNL SLVYTLAGVDCIDCAADASVVSAVNEGIEAARDILCIRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPANA ISFQRKPNVGNMMLENLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAITTADLIKRNDVDAMEIHTSGRQSTLFEEL WYALGDTVQNLKLIAVSLPNNGDSTISSMNKMFSIMKPSLRGFNLWQLDGRPMSGDIGRGATKESIVFAAHLTKAKDRPP GFLQLAGGTNAHTIDGLKKEGLFQTTITEYLDDEMSTISSSNSSHVLISGIAYGGYARKIVGRVLRSMQTQHGGAASIED HPEHLLMALREALALVGPVKNVCDP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 27 | 421 | 395 | 1.4E-197 | – | |
| PANTHER | 27 | 421 | 395 | 1.4E-197 | ||
| SUPERFAMILY | 125 | 211 | 87 | 2.2E-14 | – | |
| ProSiteProfiles | 135 | 166 | 32 | 9.365 | ||
| Gene3D | 139 | 240 | 102 | 1.7E-8 | – | |
| ProSiteProfiles | 177 | 206 | 30 | 9.264 | ||
| ProSitePatterns | 186 | 197 | 12 | - | ||
| Pfam | 216 | 417 | 202 | 5.5E-62 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0258700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…