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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0258700 |
| Transcript ID | LotjaGi6g1v0258700.4 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NADH-quinone oxidoreductase subunit I; TAIR: AT3G13640.1 RNAse l inhibitor protein 1; Swiss-Prot: sp|Q00388|VHUB_METVO Polyferredoxin protein VhuB; TrEMBL-Plants: tr|A0A151RCT3|A0A151RCT3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0258700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:57160688..57168188) extracted from Lotus japonicus Gifu genome v1.2.
CATCGGTGTAATTATCCACTCAGAACAGTCACTTGGAGTGTTTGATGCTGGGAATGGCTCTGAGATGTTTCTGCGCCCCA GATATTCCAACTCAGTACCAAAACCATGGTTCTTCCCTGCTAAAACCTTTTTTACTTGTCTCTTCTTTTTCTCTCTCTAA CATACTCATAAAATTTGAAAATTTCCAGTGAAATTGGAACAGAGAAGCAGCAATAAGAAGTGTCTTCAGAATGTGAAGAG TCTGGTCAACACTATTGAGCTTCCATCCATTTCATCTTCTCCACTTGAGTCTCTTCAGAGAGGCAACTGGGTCAAGCTCA TTTGTGGTGCAAGCTTTGAGGTAATGCAAATTTTCATAAACAAACCCAACCATGCTCTTCCTTTTTATTTGTTTTAACTT GTAAGTGATTTTAACCCCCTCTCTCTCTCTCTTTCTAGGATGTTGTTGATATCAGAAATCTCAGTTTGGTTTACACTCTT GCTGGAGGTAAGGTATTATATACTTATGATTTGTTTGAGAATAATGAAAATAAGCAGAAAATTGTATATGCATGATAATT AGAAAATTATCTATGTCTATTGGTGTTCTTGTTATTTTTTCAGCTATGCAAACTTGATATTTTGAGGAACTAATGAGTAA GGAATATCATGTGAGTTAAATTGGATTATATATGGATGCAGTTGACTGCATTGACTGCGCTGCTGATGCTTCGGTTGTCA GCGCTGTGAATGAAGGAATTGAAGCTGCAAGAGATATATTATGCATTCGAAGGCCGTGGGTGATGATCAGTGTCAATGAT GACAAAGACCTTCACTTTCGTAAGGCTGGTAGGGCAATCAGTTCTATGGAGCTTCATTGTTGTATTTGTGTTTTCTATGT ATTATATTTCAGCAACTCTATAGGTCAGAAATCTTGTGATATAGTTTGATATTCAAATATACTAGTTTAAGTGCAAAATT TAATGAACATAAAGCTCAGTCTATCACATATTGGCAATTCATGCTAATTGCTAGTAATGCCTTCTGAACAGAATTTGATC CAGAGGACTGTCCAGCAGACTGTTCACGGCCTTGTGAAAATGTGTGCCCTGCTAATGCAATATCATTCCAACGAAAACCT AATGTTGGAAATATGATGTTGGAAAACCTAAAGGTTTTAACTTGATTTTACTTAAATTTTTAAAGGTGATTTTGTCAAAC GTTCAAGCTTCATTTCCACAAAACAGAACTTGTAATATTCAATTGGCTTGAACGTGCAGGATGGAGTCATCACTGAACGC TGCTATGGCTGTGGTCGCTGTCTTCCAGTTTGCCCCTATGATAAAATTAGTGAGATACTTTCCAGTTCAATCTGAGAATA TCAGTTCTTAATATTCTCTTAATAATTTATTTCAAATATGTTAGTTAGTATCTCTGTGATATTTTTTAATTTTAGACAAT ATAAACTTTCCACAATTGTCCAGGAGAGGTAACATATGTTAGAGATGCTATCACAACTGCTGATCTCATCAAAAGAAATG ATGTTGATGCTATGGAGATACACACAAGTGGGAGGTAATATTACAGATTAAATTGATCATGTCATATAATACTAGGATAT AACTGTAATCACTCTAGTAATATGTTTCGTGATTGCTATGTCCATAATTTTATCAATCAAGTAATGAAAGTATGATTCTC AATTCTCATATACATGTAATGCATTTAGTGTTCACCAAGCTTTCTATGCTTGAGGCACAGCACAACCATGTTCTCTTAGA TTGCTTGTCTCTTTTCTTCTATTTTATCAGAGGGAAATGATTTGGAATAATTCAACAGATTATATGCAAAGACCAAATCT TAGTTTTCAATAACTTGAAATCTTAATATGCTATTTCTACGATGTTTGATTGACATCTCTAATCCATTTCCTCATCTGAC ATATGATCCCTCTAAAGGCAGAGTACACTGTTCGAAGAACTCTGGTATGCTCTAGGAGACACAGTACAAAATTTGAAGCT AATAGCAGTAAGTGGTGCCTTCAGCCTGTTCTAATATTTAAGAGGGTATAAGTAATACCTTTCTACAATAACTTAGCCTC TACGCTTTTTCCATTTGATTCAACAATTTATTATTAAAATGGTCCAGGTTAGCTTACCTAATAATGGGGATTCAACAATA TCCTCCATGAACAAAATGTTCTCTATTATGAAACCCAGTCTTCGAGGCTTCAACTTATGGCAGGTGCACCCTTTCTCTTT ATTCAACTGTTTGAACAACTTCAAATGTTAGTGAGCCAAAATTTATTCTATAACAAATCCATCTTTGCCTTATATGAAGT TAGATGGCCGTCCCATGAGTGGAGATATTGGGAGAGGAGCCACTAAGGAATCAATTGTGTTTGCTGCTCATTTGACTAAA GCAAAAGATAGACCTCCAGGTCTGTATCAATAATAATTCGATCTATGCCCCCTTGAAAGCTATATCTATCCTAATTCTGC TAATGTTTCAGCACCTTAACATGGTAGGTTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATAGATGGGTTGAAA AAAGAGGGACTCTTTCAAACAACTATAACCGGTAATGTTGCCACTTTGTGACTTTGTACATTCTCTTGTTATCACTCCTT TCTCCATTGCATTAAAATGAACCTTCTTTTTTGGTTCCTAGAGTACCTAGATGATGAAATGTCAACAATCAGCTCATCTA ATTCATCACATGTTTTAATTAGTGGCATAGCTTACGGTGGCTACGCACGGAAGGTAACACATGATTGATGCCCTTCTTTC ATTAATTTTCCATGTTTTTACTATGACCGCGTGTGGAAGGGTTTATTAGAGTTTATCTTATGGCATAAGTGCTTATGCAA GTGTTTGGGTGAGCTTATGAAAATAGCTAGTGACCTACCTATAAGCTGTTTTGAGTTCATTATCATAAGCTGCGCAGATT AGCTTATGAATAAGCACTATACCTACCTATTTTGAGCTTATTTCAATTAACTTATCAAATTAGCTTATGAATAAGTATGT ATGTGATAAACACTTAATTAAGTTGTTTACCCAAACACATCCTATATGTAGTTACATAAAAGTATAGATGTGAGTCGCAT CATGGGACTCCGGCATGTCAATTTATCCAATCTTACTATGTACATCTTTGTTCAGATTGTTGGTAGAGTATTGCGATCCA TGCAGACCCAACATGGTGGAGCTGCTTCGATTGAGGATCATCCGGAGCATCTCTTGATGGCTCTTAGGGAAGCACTTGCA TTGGTTGGACCTGTTAAAAATGTCTGTGATCCATGACAACCTCACAGTTTAAGTACTTTCTTTCATGCAGCAATATGCAT AATAGTCTTTCGATAGTAGTCAATACTAATAGGTTCTGTAGCTTGATGCTTTCGTGCAATGCATGAGCAAGACATAGCAA GTTGAGGTTGGATCAATGTATATTTTGGTCTAAAATAAAGTTCAAGATAAGACCTTTTTAAATAGAACTTGAACTTACCT TTGAACCTTGCAGTTGTATCCTAACTTCCTATTTAAAAGCATTTGTCAATGTTAAGCAAAATCGAGGGTTTATTTCAGGT TCAAGAAATCATCTTAAGTTATCACCTTTTAAAGCTAATAAGATAATTAAAACTCAAACCAAGTTGTGTTATCACTTGTT TATTGCTTTGTTTGGAGATTTCAGGGCTCATTGAACAAGACAGATTCCCCATGTTATGGATATTTTACTTAAACATGGGT CATCAGTTTGCTGAATTTGACAATGCAAGCTTTTATCATTTTCATTCACCTTTAAGGAATATCAATTCTAATCATTGGAG AATATATAAAAATGTAAATACCATGTATATTTCTGTAAACAATTGTTGTATAAATTTTGTCTGCGAAAGCATCAGTCTCC CTAGTGTAACAGCTATTGGCTAATTCAATCATAAATTTGAAATATATGTACTTATTGATAGGGTATGAAAATGACTAAAT GAGATATAAATTTCTGTGTAAACAATAATTTTAATATTCTACATATATTAATCTTATCGTTTAAAGCAAGTTGAAGTTAA TTTTGTTTTTTGATAATATTCAATAATACATAACACAGATTGTCAAGAGGGTAAAGTGTCCTTTGGAGCTCACGCTGATT TACTCATCAAAATTTACCACGTGTCACATCACAGGTGGCTCTGGAAGTGATATTTTTCAAATCAAAATCTCTTAAGTGTT GTGTTATATGTCCCCACCATGTTTAAGGAATGCAAAACCTCCCTTTAAGGTTGTTGTTTCTCGAATAATATTTAAGGGTA GAGAGGAGAGTTAATGTCTCACACCCCAACAAAGAAAAAGCTCAAATCTAATATGGATGTGAATATGGAGAATTCAGGAG CTGAAAGTAATGGTTCTCATGCAAAGAATCAGGCATTAAGGGATGTTGCGGTTAAAGAAACATTTGACAAATTGGTCAGT TCAGTTCCATATCTTCAATGTATAATGGAGATTTCTACTTTTCTCTCCTCTCCCTTTGTGCACAATATTTGGCTCTATCT TTTGTTAGGTTGAAGAAGAAAGGAAGAAGATGGTCCCACTGAAGGAAACAACTCCTCCACCAATCCTTGAAGCTGCAATT AAGAATGGAAATGTCCGGGCACCAACTCATATTACTTCCACCATTTGTGATGAAAGAGGTACTATACTAATATACTAATG TTGTACATGTGATTTAGAAACTGTGTGTCTCTCTTTTTGATAAAGTTTTGTTTTTGGAAGGTGAGGTGCCATTATATGCT GGTGTACCCTTGTCTTCCATTATTGAAAAGGGTTATGGCATTGGTGATGTTATCTCTCTTCTCTGGTTCAAACGCAGCCT TCCCCGTTACTGTACTCAATTTATTGAGGTATGTGCAGTGCTTTCCGGCAATGTTTTTCCCCATTATTTCTGTTTATGTT TTTCACTGGAGTATTTGAAATTGTTATACACTCTATAAAGAAGTTTCTTCAAAATTTTCTACTCAGTTTTCCATTTAGTA TTTCTTTTCAAAACAAACAATTGATATATCATCTTCCAGTTTCTATGGTGCTAATGTATTATTACATTGGTCAGATGTGC ATCATGTTATGTGCCGACCATGGTCCTTGCGCCTCTGGTGCTCACAATACTATTGTGACAGCAAGGGCTGGGAAGGACCT GATTTCTAGTCTAGTATCAGGTAAACACTAAATACATGCCTCTCGGTGCGTCTACTTCTGAAGCAGACTTAGTGTGTTTG GATACCAGTTAAGTTTGATTGAGCGGGCTTTTATTATAATCCCATAAGAAAAGTTCTGTCCATTTTTTTTTTCTTGAAGT GTGCTAATATACATTGGCACAATGGCACTGATGTAAACATATATCCAAACATAGTCTTACTATATTGTGGGATGACCAAA ACTTTCTGAAACAGGTTTGCTTACAATTGGTCCTCGATTTGGCGGTGCCATTGATGATGCAGCTCGCTACTTCAAGGATG CTCATGACAGGGTATAATATGAGTAATTTTCCAACAAAGCTGGATGGAACTAGCCAACTAAAATATAATTGGGGAGAGGG GTTGTAAAGAAACTAATCCTAATGAGATATTACATTCTAAGTGAAAATCAGAAACTCCATACAAACATGTACTTTGTCTT TCATCTAGCATGTGGTGCTATTATTATGTACTTTGTCTTGTCTCAGGGGCTTACGCCTGATGAGTTTGTTGAAAGCATGA AGAAGAAAGGAATTCGCGTGCCAGGAATAGGGCACAGGTAATGAATGTAATTTTGATCATTCACTAAGTAGTAGTTCTGT TTCTGTTGCTATGAAAAATGAAAATTTATGAGACTTGGTTTTGCTTTGTTAACAGGGTCAAGAATAAGGACAAGAAAGAT AAGAGAGTTGAGATGCTACAGAAGTTTGCACGGGCGCATTTTCCTTGTGTGAAATACATGGAATATGCTGTTCAAGTTGA AGATTACACCCTCTCAAAGTCAAATAAATTAATTCTCAATATTGATGGTGCCATTGCATCTCTTTTCTTGGATCTTCTGG CTGGTTGTGGAATGTTCACAGAGCAAGAGATCAGTGAAATTGTGGAGATTGGCTATCTGAATGGGCTCTTTGTGCTGGCA CGCTCCATTGGTCTGATTGGGTGAGTTTAAATTAGTCAATAGGTACATATTTCATGTGAATTGGACATTATTGAAGTTTT GGAATTTTGTCCCTTTTTTATCCACAATTCTCTTGTGGTCCATGGAGTTACACTTTCATTTAGGCGGTCCTCACAGTCAT TAATATTGGTTGTTGAGTGGTTACCAACACTAGATATTGAAATTCAGATTTCCTGCTGTCTAGAAAGTCAGTGTAAACCC TAAACTCTGTTTTGAGGGCATAGTAGACCTTTTTAAATTGAGTCGTCCGATCCCTAATTCCTAGCACCTGGGAGTGCATA GTAGACCTTTTTAAATCGGAGTCGTCCGATCCTTGATTCCCAGTACCTGGATAAGTGAAATGAGGAATCTGACGACTCTG ATTTAAAGAAATATGCGGTAAACTTAAAATCAAAGTTGAGGGTTTACACTGACTTCATTGAATTCAAAACTCTCTTAGTG CGGGAGTGAGTAGATATTACATGTCTTATATATGATGGGACTCACATAAATTTCAACTGATAAAATAGAATGCTGGAAAT AGAACGTAAAAGTGAGTGTTAAGGTACCGCTCCTTAAAAAACCAATTATACATGGTTTGGTCTAGTTGATTGATCCTTGT TTAAAATTTCAGCCATGCCTTTGACCAAAAGAGATTGAAGCAACCCCTCTACCGCCACCCATGGGAGGATGTTCTCTACA CAAATTGAGAAGGTTCTGTGTTATGGCTGGCTGGAAAACTTCGCTTCGTTTCAGATTAGGAATCTGTTGAGAAATCATGC ATCTCAAGTATCCTGGAATAAATTTTTTAGATGTTAGAGTAGTGTTGCCATCAGTAAGTTGAAACGAACAAATTCACTGT CAAATTTGAAATTACTACTGTAATTCTCTTGGTGAAGATGTTGAAGTAAATGATTGCCAAGTTCAAGAGCTTTTAATTCT GCTAAATAACGTTGTTAATTAATCTGACTGCATCAGCATGTATTGCGTTTATTACTTCTTTATTCATAGAGTATATAGCC GACAGAACACGAGGGGATTTTATGGAACACGAGAGGCCCTCGTTTCCCATGCTGGGCATATAAAATAGGTCTACATGGAC ATTTGTATCAATTTCACACACATGTCACTAGATCACATCACATATGCACGTAGGTATTCACAAATTACTGAATTGACGGT CAAGGCATATACTAATCAATTCCAATCATTACATGAAAATGTGAGGTACCATGTATCATATATTTGTCAATTCATCATTG CTTTCCACGAGTGCCTTTCAATGCCCGTGACCTCAACTACTGGCTCTTTCTTAAATCAAAG
CDS sequence (LotjaGi6g1v0258700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGGGAATGGCTCTGAGATGTTTCTGCGCCCCAGATATTCCAACTCAGTACCAAAACCATGTGAAATTGGAACAGAG AAGCAGCAATAAGAAGTGTCTTCAGAATGTGAAGAGTCTGGTCAACACTATTGAGCTTCCATCCATTTCATCTTCTCCAC TTGAGTCTCTTCAGAGAGGCAACTGGGTCAAGCTCATTTGTGGTGCAAGCTTTGAGGATGTTGTTGATATCAGAAATCTC AGTTTGGTTTACACTCTTGCTGGAGTTGACTGCATTGACTGCGCTGCTGATGCTTCGGTTGTCAGCGCTGTGAATGAAGG AATTGAAGCTGCAAGAGATATATTATGCATTCGAAGGCCGTGGGTGATGATCAGTGTCAATGATGACAAAGACCTTCACT TTCGTAAGGCTGAATTTGATCCAGAGGACTGTCCAGCAGACTGTTCACGGCCTTGTGAAAATGTGTGCCCTGCTAATGCA ATATCATTCCAACGAAAACCTAATGTTGGAAATATGATGTTGGAAAACCTAAAGGATGGAGTCATCACTGAACGCTGCTA TGGCTGTGGTCGCTGTCTTCCAGTTTGCCCCTATGATAAAATTAGAGAGGTAACATATGTTAGAGATGCTATCACAACTG CTGATCTCATCAAAAGAAATGATGTTGATGCTATGGAGATACACACAAGTGGGAGGCAGAGTACACTGTTCGAAGAACTC TGGTATGCTCTAGGAGACACAGTACAAAATTTGAAGCTAATAGCAGTTAGCTTACCTAATAATGGGGATTCAACAATATC CTCCATGAACAAAATGTTCTCTATTATGAAACCCAGTCTTCGAGGCTTCAACTTATGGCAGTTAGATGGCCGTCCCATGA GTGGAGATATTGGGAGAGGAGCCACTAAGGAATCAATTGTGTTTGCTGCTCATTTGACTAAAGCAAAAGATAGACCTCCA GGTTTTCTTCAACTTGCTGGTGGAACTAATGCTCACACAATAGATGGGTTGAAAAAAGAGGGACTCTTTCAAACAACTAT AACCGAGTACCTAGATGATGAAATGTCAACAATCAGCTCATCTAATTCATCACATGTTTTAATTAGTGGCATAGCTTACG GTGGCTACGCACGGAAGATTGTTGGTAGAGTATTGCGATCCATGCAGACCCAACATGGTGGAGCTGCTTCGATTGAGGAT CATCCGGAGCATCTCTTGATGGCTCTTAGGGAAGCACTTGCATTGGTTGGACCTGTTAAAAATGTCTGTGATCCATGA
Protein sequence (LotjaGi6g1v0258700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLGMALRCFCAPDIPTQYQNHVKLEQRSSNKKCLQNVKSLVNTIELPSISSSPLESLQRGNWVKLICGASFEDVVDIRNL SLVYTLAGVDCIDCAADASVVSAVNEGIEAARDILCIRRPWVMISVNDDKDLHFRKAEFDPEDCPADCSRPCENVCPANA ISFQRKPNVGNMMLENLKDGVITERCYGCGRCLPVCPYDKIREVTYVRDAITTADLIKRNDVDAMEIHTSGRQSTLFEEL WYALGDTVQNLKLIAVSLPNNGDSTISSMNKMFSIMKPSLRGFNLWQLDGRPMSGDIGRGATKESIVFAAHLTKAKDRPP GFLQLAGGTNAHTIDGLKKEGLFQTTITEYLDDEMSTISSSNSSHVLISGIAYGGYARKIVGRVLRSMQTQHGGAASIED HPEHLLMALREALALVGPVKNVCDP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 27 | 421 | 395 | 1.4E-197 | – | |
| PANTHER | 27 | 421 | 395 | 1.4E-197 | ||
| SUPERFAMILY | 125 | 211 | 87 | 2.2E-14 | – | |
| ProSiteProfiles | 135 | 166 | 32 | 9.365 | ||
| Gene3D | 139 | 240 | 102 | 1.7E-8 | – | |
| ProSiteProfiles | 177 | 206 | 30 | 9.264 | ||
| ProSitePatterns | 186 | 197 | 12 | - | ||
| Pfam | 216 | 417 | 202 | 5.5E-62 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0258700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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