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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR021841
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.246s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0006439.1
n.a. PREDICTED: protein VAC14 homolog [Cicer arietinum] gi|502123772|ref|XP_004498253.1| chr0 2476011 2487918 -
2 domain predictions
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Lj4g3v3113090.1
n.a. PREDICTED: protein VAC14 homolog [Glycine max] gi|356524533|ref|XP_003530883.1| chr4 41564051 41571400 -
2 domain predictions
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LotjaGi2g1v0071300.1
n.a. VAC14-like protein; TAIR: AT2G01690.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog; TrEMBL-Plants: tr|A0A072VR25|A0A072VR25_MEDTR VAC14-like protein; Found in the gene: LotjaGi2g1v0071300 LjG1.1_chr2 17548365 17560860 -
2 domain predictions
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LotjaGi2g1v0071300.2
n.a. VAC14-like protein; TAIR: AT2G01690.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog; TrEMBL-Plants: tr|A0A072VR25|A0A072VR25_MEDTR VAC14-like protein; Found in the gene: LotjaGi2g1v0071300 LjG1.1_chr2 17549215 17560438 -
2 domain predictions
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LotjaGi2g1v0071300.3
n.a. VAC14-like protein; TAIR: AT2G01690.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog; TrEMBL-Plants: tr|A0A072VR25|A0A072VR25_MEDTR VAC14-like protein; Found in the gene: LotjaGi2g1v0071300 LjG1.1_chr2 17549215 17560438 -
2 domain predictions
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LotjaGi2g1v0071300.4
n.a. VAC14-like protein; TAIR: AT2G01690.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog; TrEMBL-Plants: tr|A0A072VR25|A0A072VR25_MEDTR VAC14-like protein; Found in the gene: LotjaGi2g1v0071300 LjG1.1_chr2 17549471 17560438 -
2 domain predictions
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LotjaGi4g1v0457000.1
n.a. Protein VAC14 like; TAIR: AT2G01690.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog; TrEMBL-Plants: tr|A0A0B2Q990|A0A0B2Q990_GLYSO Protein VAC14 like; Found in the gene: LotjaGi4g1v0457000 LjG1.1_chr4 82832937 82841469 -
2 domain predictions
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LotjaGi4g1v0457000.2
n.a. Protein VAC14 like; TAIR: AT2G01690.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog; TrEMBL-Plants: tr|A0A0B2Q990|A0A0B2Q990_GLYSO Protein VAC14 like; Found in the gene: LotjaGi4g1v0457000 LjG1.1_chr4 82834338 82840963 -
2 domain predictions
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LotjaGi4g1v0457000.3
n.a. Protein VAC14 like; TAIR: AT2G01690.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog; TrEMBL-Plants: tr|A0A0B2Q990|A0A0B2Q990_GLYSO Protein VAC14 like; Found in the gene: LotjaGi4g1v0457000 LjG1.1_chr4 82834354 82840963 -
2 domain predictions
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