Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0457000 |
| Transcript ID | LotjaGi4g1v0457000.3 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein VAC14 like; TAIR: AT2G01690.1 ARM repeat superfamily protein; Swiss-Prot: sp|Q9ZU97|VAC14_ARATH Protein VAC14 homolog; TrEMBL-Plants: tr|A0A0B2Q990|A0A0B2Q990_GLYSO Protein VAC14 like; Found in the gene: LotjaGi4g1v0457000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82834354..82840963) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCCGACGCTCTCTCGTTGATTCCGGCAGCCGTGCTCCGCAACCTTGCTGACAAGCTCTATGAGAAGCGGAAGAATGC TGCTCTTGAGGTTTCTACTCTGCCCCGTTTCGTTTCTTGGTTTTCAATTTGCTCAATTTTGGATTTTTGTTTTGTTTTTG GTAATTTGGGACTGTTGTTGATGATGGGTCTGTGTGTGCTTGTGTGTAGATTGAGGGGATAGTGAAGCAGCTAGCTACTG GTGGTGATCATGATAAGATAGCGGCTGTGGTCAAATTGTTGACTACTGAATTCACATTCTCACCACAAGCCAATCAGAGA AAGGTAACTTTTTTCTTTCTTAAATGTTTGTTTTATTAATTTGGATTCAATATATTTGTCATGTTATATGCTGGGTGATT TTTGTTTTCTAAGAATAAAATAATTTTGAATGAAGGGAGGATTGATTGGATTAGCTGCTGCAACTGTTGGGTTGGCTTCT GAAGCAGCTCAGCATCTTGAGGTTAGGGCTTGTTCACTTGCTTTAAGTTTTTTGTAATTTTGTCCTAGTTTGCTTCTTTG ATCATCATGGCATACAATTGAGACTCTTTCCAGTAGTGAAATTATGCTAAACTTTTCCAGTAGTATATAAGAAGCTTATG AATGGTCAATGGGGGCTAAGTACTCCGTGCTTCTTATGTATGCGAAATAATAATATTGTAAACGAAAATGGTTATCCTTA AGGGAATGAACTGAAATATGTTGAATTCCTGGATGGTAAATCATATCTAATACTTGGTAGTGTTGTATTCTTTCGGAATG AACTAAATTATAAGCATGCATTGGTGTTATCCTTCACTTCATTATTGAGCTTATTTTGACATGCCTAAGGGTATATACAC CATTGCTTTGCACTAACCTTTCTTGCTGACGTATTATCCTTGTAATTTGAGTCTTGACAGCATATTGTGCCCCCGGTGTT AAATTCTTTCTCTGACCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCTCTATATAACATTGCTAAGGTGAGGATTT GATTACACTGACATATGTATACTGCTTCAATCTGATCATCTACTATCCTATAATGATATCTTTTATATTTTCTTTCAGGT TGTGAGAGGGGATTTTATTGTATTCTTCAACCAGATTTTTGATGCCTTATGCAAGCTTTCTGCAGACTCAGACGCCAATG TACAAAGTGCTGCGCACCTCTTAGATCGACTTGTGAAGGTATATGTTTTCCTGAACTCCAATAAGCTTTTGTGTGGCTTA ATAAGTTTACAAATAGAAATTATATGCTGATTAGGCATTGATCCAAAAAGAATTTGAGTTGTTGTTCCTTTAGCTCAACT GATGATTGAACATTGCTCTATTGGAACAGGATATCGTGACTGAAAGTGATCAATTCAGGTGCACCATCCTCTGTTTATAT TTTCTTGTTTATCTGTATGTGGAGTTTTAAATTTTCAGAAGACTCGTACATACAGAGATCTTTTAAATGTAATTTTTGAA ATAGTTGAAATGTGTTACACCATGAGGTGTGAGATGTTCTCGTACTCAAGGAAGCAACTTTTTAATTTTCATAACCATAA TAAGAAAATGAAAACCAACCTATTCCTCCCTATATGAATTTGCGCTGCCTCATTCCCCTCCTTTTTCCTTTTCTGATCTT TAGTATTGAGGAATTTATACCGCTGCTAAGGGAGCGCATGAATGTATTGAATCCATATGTCCGCCAGTTTTTGGTGGGAT GGATTACGGTATTGGACAGTGTCCCAGATATCGATATGCTGGGCTTTCTTCCTGATTTTCTTGATGGTAAGTACATGGTT TGAAGAAGGGTCCTTGTCTTTCTTGACTTTTGATACAACTGAATTTCAACCACCTAATCATACATAAATATCTCAGGCTT GTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCAGAGTTCCTTCAAGAGATTA AGAACTCCCCAGTAAGTCTCCTGCTAATGCTTTTTCCGTTTTTGTTAGACTTGTAAGGATTCTGGCACTTTAAGAGTCCA ATTCTTTTATGCCATTATCCCCCCTTTTTTGTTCATTTGTCATTTTCTGACTCGAGCAGTGCTACTCTTGAAGTCTGTAG ATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCAGGCTCTCCAGATGAATTTACTAGGCTAACAGCTATCACATGG GTAAGTGGTATTATAATTCTGACTTAATAGCCCAGTATTTACTGATATAATACCCCTATACTTTAGTTTTGGCATTTTCT CAAAGCTATACTTGTTTTTTTTATATCAAAGAAATATTATTGGTTACTGATTTGTGATTCACTTACATTTTATATAATTT ATGTATGCGCTTTCTTATTTGTACAGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCTGAC ATTCTTGGAGCCATTTTGCCTTGTATATCAGATAAAGAAGAGAAAATTAGAGTTGTAGGTTCACTTGAGCTTTCCTTGTT TTCCTTCCTCTTTCTTCAACCTTTTTTTGTTCTCTGTTTTGCCCCTTTTTCAATTACATTGCTCCCTGCCATGTATACCA ACAAGTTTAAAGTTATCTTTGGCATATGTTCAAGGTTGCTCGTGAAACAAATGAAGAGCTACGCACCATCAAGGCTGATC CAGCTGAAGGGTTTGATGTAGGAGCAATTCTCTCCATTGCTAGGAGGTGTGGTTTTTATAGCCTGATTAAAGAGGCTAGG AGTAGGTTTTAATTTTGTAAGACATGCAATTGAAATATTATGGATTTGTGTAGTGGCTACTTCACCACTTTAGAAACTTT TGGTAAATGATTGTCAAGGTCTTTTTTGTTTAGCCAAATCTATTTTGCACTGATTATTCTGTGAAATGATTTTGAGTGGT TTTCACTGATCAGGCAATTATCTAGTGACTGGGAGGCTACTCGAATTGAAGCTCTGCACTGGATATCAACCCTTTTAAAC AAACATCGTACTGAGGTGAATTGGTTTCAGCTATTATTTTGTCATTTTTTGAGACCCCTGTAGATCTGTAGAGTTTAGTC TATCTGCTTTCTTAGTATAGCCAATGGAGTTACTTGTGGAAACTAGCTGTTGTTCATGCTCGGAATCATACTAGGTTTTT GGTTAAGGTACGCTAGGAGTTGGAGCTGTAGTTCTACTGGTGATTGATGAATGCTACTTGACTGCAACCAGCAAACAATG TCATTCCGCAGCATTTTTGTTTGTACCTGCTGTAGCTCTGCCTAAGTATTAAATGAGATGAGGCAGCATGCTTTCCTTTC ACATGATTCAGGAATTAGGAATCCAATAAAATTATTATTTGTCCTGGTTTAATTATAGTGTTATCAGTCTTGGCTGATCA ACTTGGAAATAATTATGGGATTTCTTGGCTATTTAAAAATTCAGTTCACTCACCTACCAATAATAGTAATACTTTATTTG GCATTTTTCTCTTTTTTGTGCAATAATTTATTTTTGTATATTAATGTCCTCCTCTCTTCTTTAAGTAATTATTTTTTCTA TTTACCTGAAATTCTCTGCAAAAGCTTGTGTATCTCCTTTATTATGTCATTGAGATTTTGGTGCCCATACTCATTTATTG ACTTTTCTTGTCTGAAATAGGTTTTGCAGTATCTAAATGACATATTTGACTCCCTGCTGAAGGCACTTTCAGATCCATCT GATGAGGTAGCTTTGTTATCCTGAAATCATTTTATTTTTTACTACACCTGTTCCATCAAATCATTCATTTCTAAAATCTT TGTTTGATCAAACCATGCTATTCTCATTATGTTCAACTTAGGATGTTCAGGATCAATACCTCCCCTCAGCCCCCCCCCCC CCCCAAATGCCTTGTTAACTTGACTAGAGCTTAATAAAAATGTTTTGTTTTTAAATATCTCCTATCTGTATTTATTTGCA GTATGTTGCACTTCTGGAAATTAATAATTCCTCACAATTTTTAATTGAATAGGTTGTTCTTCTAGTTCTTGATGTTCATG CATGCATTGCAAAAGATCCTCAGCACTTTCGGCAGCTTGTTGTTTTCCTGGTGCACAATTTCCGGATAGACAACTCTCTT TTGGAAAAGTAAGTTGTTTTTCTTCATCCAATATATTTAAGTTATTTGGTTTTGCTAAAATATATTTTTAACTGCTAATT TCCTGTTTTTATTAATCTTAATATATATAATATTCTAGGCGTGGTGCTTTAATAATTCGTCGACTTTGTGTGCTTTTAAA TGCTGAGAGAGTCTACCGTGAACTTTCTACAATACTAGAAGGGGAATCCGACTTGGATTTTGCATCAATTATGGTTCAGG TAGGTTGTGACTTTACTGAGTGCGTAATTAAAAAGTTGCAATACACTTCTGCTCTATAGTCTTCACAGGTCTATGCCTCA CTTCATCCCCAATTTTTGTCAATGAAACAGCTACCTTATATTTTTTTGCTTGCATACATTGGCAGGATTAAGTGATTTTA GTTTTAACTGTTACTCCATAGCTAGCTAACTTGTTTCACTTCAACTTATGCGCGGCCCTATAAAAACACTTCTGTTGGAT AATTTGCTCATTCCCAACTTACACATTGGTTTTTAATGTTTTTATGCTCGACTATAATGAATTTTCCAGGCATTGAATTT GATCTTACTTACATCATCGGAACTATCTGAGATTAGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCCGGGAAGGATT TATATGTTTCTTTGTATGCCTCATGGTGCCATTCTCCAATGGCAATTATAAGTCTTTGCTTATTAGCTCAGGTAGTTATC CATTACTTGGTTTTAATTTTTTGTTTGAATTTGCACACTCACACATCTGAACAATGTGTATTTGTGGACAATAGCTTAGA TTTATCTGAATCATGTGGCCCCGTTTTTGTAATATTCAATTATCTTCCTTGACAGACTTACCAACATGCAAGTACTGTGA TTCAATCTCTGGTAGAGGAGGATATTAATGTCAAACTCTTAGTCCAGCTGGACAAATTGATTCGCTTGCTGGAAACTCCA GTCTTCACTTATCTTAGATTGCAGGTACTTGATTGAAACATCTACTCTTCCAATGCAGTTCAAATTTAATCTCTTGATAA ACAAATTTTTGATGCAGTCATTTCCCTAAAACTGATTCTAATAAAATTAAAGATTTGAACCATTAATGCGATTAAACATA TCCTAGGCATGACTTGTATATCATCACTCATTTTGCATCTATTGTCAAGATGAGTCCAGGTAGGCTAGTTAAATAGGAGG GAACATTGTAAAGAGAGTTATCCTCATATAGCTCTATTGTTATAATAATACTCCATTTCTTGCGTTGTTCATCAATGGTT ATTTAATTTTGCAGCTTCTCGAACCTGGAAGATATCCATGGTTGTTTAAAGCCTTGTATGGTCTTCTCATGTTGCTTCCT CAGGTATGTGCAACTTAAAATATTTGTTGTTTTAACTTAAAAAAGAAGTCAAGGCGTTCGTATTCTGTTCCTGTTGGCTG TGTTCAAACATCCTTTGGTGGTAGGCTAATTCTTAGGCGTTTTAACATTACTAACTTTATTTTAACTCTTTTTTCAAGAT TTAAAATGACATTTTTCCTTGTATCACCGTGTGTAGTATACATCATGCTATGTACCGTTGTGTACTGCTATCACCATATT TATCATATAATTCATATTCCTATCCACTTAATCTGGCTATGTCCTGGTTGTGCCAAAAGAAAGGATATACATCTGTAGAT TATGTAATTTAATGCATGTGATTATTTCTTGAAGGAATTTTTCTCCTCTAAATTGCAGAAGGATAGAGTAAGTCATCACA ATTATTGATTGAGAAATCAATAGTTGAAATTGTGATCATATATTTGTGCATGCATAATAAACTATAATGTTCTTTACATC TTAACCATTGAATTCTCAATCAATTGTTGTGATTATTTGCTTTACTTTAGTTATTCTCTCACTTCAGAGGAGCTAAATTA AACTTGAATATATCAATTCTCAGAAATCTTGATATACCGATGGTTTTCTGTTTTGTATTGACACTTCATTTTATACCATT ATGCAGCAAAGTGCTGCCTTCAAGATACTAAAAACTCGTTTAAAAGCTGTGCCATCGTTTTCTTTCAATGGTGAGCAATT GAAGAAAACATCCTCAGGGAATCCCTATCAATTTCTACACCACATGTCTGGTGGATCTCATACTTCTGAGGATGGTGACA TAACTGCTGATAGTGGGAACTCACACAACGGGATAAATTTTGCTGCAAGGCTACAACAGTTTCAACAAATGCAGCGCCAG CATCGTGTGCATATGAAAGTACAGACACTGTCTCGCAAAAATTCCCCTTCCTTGTCCAAGGTTGCTGACTTCTTCATTTT GCATCTTACTTCTGTTTACGCTCAAACTTCAGAGATTAAGCAACATTGCCTGCTTCGTCGTTACTTCAGAAGACAAACTA TTTTTTAAAACCTGCTTTTCAAAAGAAGAAAAGAAAAGAAGCCTGTTTGA
CDS sequence (LotjaGi4g1v0457000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGACGCTCTCTCGTTGATTCCGGCAGCCGTGCTCCGCAACCTTGCTGACAAGCTCTATGAGAAGCGGAAGAATGC TGCTCTTGAGATTGAGGGGATAGTGAAGCAGCTAGCTACTGGTGGTGATCATGATAAGATAGCGGCTGTGGTCAAATTGT TGACTACTGAATTCACATTCTCACCACAAGCCAATCAGAGAAAGGGAGGATTGATTGGATTAGCTGCTGCAACTGTTGGG TTGGCTTCTGAAGCAGCTCAGCATCTTGAGCATATTGTGCCCCCGGTGTTAAATTCTTTCTCTGACCAAGATAGCAGAGT TCGTTATTATGCTTGTGAAGCTCTATATAACATTGCTAAGGTTGTGAGAGGGGATTTTATTGTATTCTTCAACCAGATTT TTGATGCCTTATGCAAGCTTTCTGCAGACTCAGACGCCAATGTACAAAGTGCTGCGCACCTCTTAGATCGACTTGTGAAG GATATCGTGACTGAAAGTGATCAATTCAGTATTGAGGAATTTATACCGCTGCTAAGGGAGCGCATGAATGTATTGAATCC ATATGTCCGCCAGTTTTTGGTGGGATGGATTACGGTATTGGACAGTGTCCCAGATATCGATATGCTGGGCTTTCTTCCTG ATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCAGAG TTCCTTCAAGAGATTAAGAACTCCCCATCTGTAGATTATGGTCGAATGGCTGAAATACTGGTACAGAGGGCAGGCTCTCC AGATGAATTTACTAGGCTAACAGCTATCACATGGATAAATGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATT ATGCTGACATTCTTGGAGCCATTTTGCCTTGTATATCAGATAAAGAAGAGAAAATTAGAGTTGTTGCTCGTGAAACAAAT GAAGAGCTACGCACCATCAAGGCTGATCCAGCTGAAGGGTTTGATGTAGGAGCAATTCTCTCCATTGCTAGGAGGCAATT ATCTAGTGACTGGGAGGCTACTCGAATTGAAGCTCTGCACTGGATATCAACCCTTTTAAACAAACATCGTACTGAGGTTT TGCAGTATCTAAATGACATATTTGACTCCCTGCTGAAGGCACTTTCAGATCCATCTGATGAGGTTGTTCTTCTAGTTCTT GATGTTCATGCATGCATTGCAAAAGATCCTCAGCACTTTCGGCAGCTTGTTGTTTTCCTGGTGCACAATTTCCGGATAGA CAACTCTCTTTTGGAAAAGCGTGGTGCTTTAATAATTCGTCGACTTTGTGTGCTTTTAAATGCTGAGAGAGTCTACCGTG AACTTTCTACAATACTAGAAGGGGAATCCGACTTGGATTTTGCATCAATTATGGTTCAGGCATTGAATTTGATCTTACTT ACATCATCGGAACTATCTGAGATTAGAGATCTTTTGAAGCAATCACTGGTAAATCCTGCCGGGAAGGATTTATATGTTTC TTTGTATGCCTCATGGTGCCATTCTCCAATGGCAATTATAAGTCTTTGCTTATTAGCTCAGACTTACCAACATGCAAGTA CTGTGATTCAATCTCTGGTAGAGGAGGATATTAATGTCAAACTCTTAGTCCAGCTGGACAAATTGATTCGCTTGCTGGAA ACTCCAGTCTTCACTTATCTTAGATTGCAGCTTCTCGAACCTGGAAGATATCCATGGTTGTTTAAAGCCTTGTATGGTCT TCTCATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATACTAAAAACTCGTTTAAAAGCTGTGCCATCGTTTTCTTTCA ATGGTGAGCAATTGAAGAAAACATCCTCAGGGAATCCCTATCAATTTCTACACCACATGTCTGGTGGATCTCATACTTCT GAGGATGGTGACATAACTGCTGATAGTGGGAACTCACACAACGGGATAAATTTTGCTGCAAGGCTACAACAGTTTCAACA AATGCAGCGCCAGCATCGTGTGCATATGAAAGTACAGACACTGTCTCGCAAAAATTCCCCTTCCTTGTCCAAGGTTGCTG ACTTCTTCATTTTGCATCTTACTTCTGTTTACGCTCAAACTTCAGAGATTAAGCAACATTGCCTGCTTCGTCGTTACTTC AGAAGACAAACTATTTTTTAA
Protein sequence (LotjaGi4g1v0457000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADALSLIPAAVLRNLADKLYEKRKNAALEIEGIVKQLATGGDHDKIAAVVKLLTTEFTFSPQANQRKGGLIGLAAATVG LASEAAQHLEHIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVK DIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSE FLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETN EELRTIKADPAEGFDVGAILSIARRQLSSDWEATRIEALHWISTLLNKHRTEVLQYLNDIFDSLLKALSDPSDEVVLLVL DVHACIAKDPQHFRQLVVFLVHNFRIDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILL TSSELSEIRDLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASTVIQSLVEEDINVKLLVQLDKLIRLLE TPVFTYLRLQLLEPGRYPWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSFSFNGEQLKKTSSGNPYQFLHHMSGGSHTS EDGDITADSGNSHNGINFAARLQQFQQMQRQHRVHMKVQTLSRKNSPSLSKVADFFILHLTSVYAQTSEIKQHCLLRRYF RRQTIF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 692 | 692 | 0.0 | – | |
| PANTHER | 1 | 692 | 692 | 0.0 | ||
| SUPERFAMILY | 3 | 547 | 545 | 7.12E-66 | ||
| Gene3D | 33 | 191 | 159 | 3.2E-11 | ||
| Pfam | 65 | 161 | 97 | 3.1E-40 | ||
| ProSiteProfiles | 92 | 127 | 36 | 10.321 | ||
| Gene3D | 204 | 334 | 131 | 5.5E-12 | ||
| Gene3D | 336 | 485 | 150 | 1.9E-6 | ||
| Pfam | 429 | 608 | 180 | 1.6E-72 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphatidylinositol biosynthetic process | The chemical reactions and pathways resulting in the formation of phosphatidylinositol, any glycophospholipid in which the sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol. | ||
| Cellular component | PAS complex | A class III phosphatidylinositol 3-kinase complex that contains a phosphatidylinositol-3-phosphate 5-kinase subunit (Fab1p in yeast; PIKfyve in mammals), a kinase activator, and a phosphatase, and may also contain additional proteins; it is involved in regulating the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate. In mammals the complex is composed of PIKFYVE, FIG4 and VAC14. In yeast it is composed of Atg18p, Fig4p, Fab1p, Vac14p and Vac7p. |
Expression pattern of LotjaGi4g1v0457000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…