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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023231
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.135s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0114629.1
n.a. PREDICTED: clustered mitochondria protein-like isoform X1 [Cicer arietinum] gi|502170858|ref|XP_004514933.1| chr0 50267301 50282465 +
2 domain predictions
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Lj3g3v0477990.1
n.a. PREDICTED: protein KIAA0664 homolog [Glycine max] gi|356555293|ref|XP_003545968.1| chr3 5436608 5452495 +
2 domain predictions
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Lj3g3v0477990.2
n.a. PREDICTED: protein KIAA0664 homolog [Glycine max] gi|356555293|ref|XP_003545968.1| chr3 5436608 5452495 +
2 domain predictions
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Lj3g3v2441940.2
n.a. PREDICTED: clustered mitochondria protein-like [Cicer arietinum] gi|502156861|ref|XP_004510673.1| chr3 30151071 30164582 +
2 domain predictions
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Lj3g3v2441940.4
n.a. PREDICTED: clustered mitochondria protein-like [Cicer arietinum] gi|502156861|ref|XP_004510673.1| chr3 30151071 30164582 +
2 domain predictions
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LotjaGi3g1v0058500.1
n.a. Clustered mitochondria protein homolog; TAIR: AT3G52140.2 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|F4J5S1|CLU_ARATH Clustered mitochondria protein; TrEMBL-Plants: tr|V7BVK6|V7BVK6_PHAVU Clustered mitochondria protein homolog; Found in the gene: LotjaGi3g1v0058500 LjG1.1_chr3 6148523 6164527 +
2 domain predictions
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LotjaGi3g1v0124300.1
n.a. Clustered mitochondria protein homolog; TAIR: AT3G52140.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|F4J5S1|CLU_ARATH Clustered mitochondria protein; TrEMBL-Plants: tr|I1MJM1|I1MJM1_SOYBN Clustered mitochondria protein homolog; Found in the gene: LotjaGi3g1v0124300 LjG1.1_chr3 15200583 15219796 -
2 domain predictions
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LotjaGi3g1v0124300.2
n.a. Clustered mitochondria protein homolog; TAIR: AT3G52140.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|F4J5S1|CLU_ARATH Clustered mitochondria protein; TrEMBL-Plants: tr|I1MJM1|I1MJM1_SOYBN Clustered mitochondria protein homolog; Found in the gene: LotjaGi3g1v0124300 LjG1.1_chr3 15201214 15217059 -
2 domain predictions
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LotjaGi3g1v0124300.3
n.a. Clustered mitochondria protein homolog; TAIR: AT3G52140.1 tetratricopeptide repeat (TPR)-containing protein; Swiss-Prot: sp|F4J5S1|CLU_ARATH Clustered mitochondria protein; TrEMBL-Plants: tr|I1MJM1|I1MJM1_SOYBN Clustered mitochondria protein homolog; Found in the gene: LotjaGi3g1v0124300 LjG1.1_chr3 15201214 15217061 -
2 domain predictions
 –