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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR024950
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 15 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.085s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v1182240.1
n.a. PREDICTED: laforin-like [Glycine max] gi|356516265|ref|XP_003526816.1| chr1 14478421 14481745 -
2 domain predictions
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Lj1g3v1454030.1
n.a. PREDICTED: dual specificity protein phosphatase PHS1-like [Cicer arietinum] gi|502133383|ref|XP_004501744.1| chr1 17440626 17448475 -
2 domain predictions
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Lj1g3v3183530.1
n.a. PREDICTED: protein-tyrosine-phosphatase MKP1-like [Cicer arietinum] gi|502102464|ref|XP_004492084.1| chr1 36267168 36269313 +
2 domain predictions
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Lj1g3v3558160.1
n.a. PREDICTED: dual specificity protein phosphatase 12-like [Cicer arietinum] gi|502171298|ref|XP_004515029.1| chr1 40911886 40913710 +
2 domain predictions
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Lj1g3v4107140.1
n.a. PREDICTED: dual specificity protein phosphatase 12-like isoform X2 [Cicer arietinum] gi|502108122|ref|XP_004493392.1| chr1 48870142 48873448 +
2 domain predictions
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Lj2g3v2856060.1
n.a. PREDICTED: protein-tyrosine-phosphatase IBR5-like [Glycine max] gi|356501245|ref|XP_003519436.1| chr2 37286685 37291316 +
2 domain predictions
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Lj4g3v1217120.1
n.a. PREDICTED: protein-tyrosine phosphatase mitochondrial 1-like protein-like [Glycine max] gi|356510670|ref|XP_003524059.1| chr4 18103304 18107179 -
2 domain predictions
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Lj4g3v2400750.1
n.a. PREDICTED: dual specificity protein phosphatase 1-like isoform X1 [Cicer arietinum] gi|502151309|ref|XP_004508377.1| chr4 33142302 33145580 -
2 domain predictions
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Lj4g3v2400750.2
n.a. PREDICTED: dual specificity protein phosphatase 1-like isoform X2 [Cicer arietinum] gi|502151311|ref|XP_004508378.1| chr4 33142302 33145580 -
2 domain predictions
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Lj4g3v2728260.1
n.a. PREDICTED: protein-tyrosine-phosphatase MKP1-like [Cicer arietinum] gi|502140262|ref|XP_004504136.1| chr4 36653535 36655521 +
2 domain predictions
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Lj4g3v2882030.1
n.a. PREDICTED: dual specificity protein phosphatase PHS1-like [Cicer arietinum] gi|502139515|ref|XP_004503799.1| chr4 38497942 38503834 -
2 domain predictions
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Lj4g3v3032690.1
n.a. PREDICTED: protein-tyrosine phosphatase mitochondrial 1-like [Glycine max] gi|356523809|ref|XP_003530527.1| chr4 40607657 40610010 -
2 domain predictions
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Lj5g3v2240850.1
n.a. Phosphotyrosine protein phosphatases superfamily protein [Theobroma cacao] gi|508721723|gb|EOY13620.1| chr5 32196349 32198915 -
2 domain predictions
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Lj6g3v0574850.1
n.a. PREDICTED: protein-tyrosine-phosphatase MKP1-like isoform X1 [Cicer arietinum] gi|502135593|ref|XP_004502386.1| chr6 5731146 5735480 -
2 domain predictions
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Lj6g3v0574860.1
n.a. PREDICTED: protein-tyrosine-phosphatase MKP1-like isoform X2 [Cicer arietinum] gi|502135596|ref|XP_004502387.1| chr6 5731394 5735480 -
2 domain predictions
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