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Lj4g3v2882030.1

Overview

Field Value
Gene ID Lj4g3v2882030
Transcript ID Lj4g3v2882030.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dual specificity protein phosphatase PHS1-like [Cicer arietinum] gi|502139515|ref|XP_004503799.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF56112
55 432 378 3.57E-68
IPR011009
Pfam
PF09192
103 418 316 5.10E-47
IPR015275
Gene3D
G3DSA:3.30.1010.10
177 234 58 1.20E-04 –
Gene3D
G3DSA:1.10.1070.11
265 326 62 3.20E-36
IPR000403
MobiDBLite
mobidb-lite
362 405 44 – –
Gene3D
G3DSA:1.10.1070.11
408 522 115 3.20E-36
IPR000403
MobiDBLite
mobidb-lite
564 602 39 – –
PANTHER
PTHR10159:SF346
589 896 308 3.00E-182 –
PANTHER
PTHR10159
589 896 308 3.00E-182
IPR024950
SMART
SM00195
697 839 143 8.30E-25
IPR020422
ProSiteProfiles
PS50054
697 841 145 32.17
IPR020422
SUPERFAMILY
SSF52799
697 842 146 3.41E-32
IPR029021
CDD
cd00127
698 837 140 2.63E-42
IPR020422
Gene3D
G3DSA:3.90.190.10
698 848 151 4.90E-40
IPR029021
Pfam
PF00782
716 838 123 2.90E-22
IPR000340
ProSiteProfiles
PS50056
762 818 57 10.871
IPR000387

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0008138
Molecular function Protein tyrosine/serine/threonine phosphatase activity Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0016311
Biological process Dephosphorylation The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
Subterm of
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

Genome browser

LORE1 insertions 16

Expression data

Expression pattern

Expression pattern of Lj4g3v2882030.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2882030.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.