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Lj2g3v2856060.1

Overview

Field Value
Gene ID Lj2g3v2856060
Transcript ID Lj2g3v2856060.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein-tyrosine-phosphatase IBR5-like [Glycine max] gi|356501245|ref|XP_003519436.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10159:SF329
1 173 173 1.70E-105 –
PANTHER
PTHR10159
1 173 173 1.70E-105
IPR024950
SMART
SM00195
46 173 128 2.30E-18
IPR020422
SUPERFAMILY
SSF52799
47 173 127 2.99E-28
IPR029021
ProSiteProfiles
PS50054
47 173 127 25.921
IPR020422
CDD
cd00127
47 173 127 2.15E-42
IPR020422
Gene3D
G3DSA:3.90.190.10
47 173 127 1.40E-34
IPR029021
Pfam
PF00782
55 173 119 1.60E-22
IPR000340
ProSiteProfiles
PS50056
103 163 61 11.75
IPR000387
ProSitePatterns
PS00383
124 134 11 –
IPR016130

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004725
Molecular function Protein tyrosine phosphatase activity Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0008138
Molecular function Protein tyrosine/serine/threonine phosphatase activity Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0016311
Biological process Dephosphorylation The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
Subterm of
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj2g3v2856060.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj2g3v2856060.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.