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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2240850 |
| Transcript ID | Lj5g3v2240850.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Phosphotyrosine protein phosphatases superfamily protein [Theobroma cacao] gi|508721723|gb|EOY13620.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| Phobius | 12 | 32 | 21 | – | – | |
| TMHMM | 17 | 34 | 18 | – | – | |
| Phobius | 33 | 37 | 5 | – | – | |
| TMHMM | 38 | 60 | 23 | – | – | |
| PANTHER | 38 | 275 | 238 | 4.00E-90 | – | |
| Phobius | 38 | 60 | 23 | – | – | |
| PANTHER | 38 | 275 | 238 | 4.00E-90 | ||
| Phobius | 61 | 71 | 11 | – | – | |
| TMHMM | 65 | 87 | 23 | – | – | |
| Phobius | 72 | 90 | 19 | – | – | |
| Phobius | 91 | 101 | 11 | – | – | |
| TMHMM | 102 | 119 | 18 | – | – | |
| Phobius | 102 | 119 | 18 | – | – | |
| Phobius | 120 | 275 | 156 | – | – | |
| SUPERFAMILY | 133 | 271 | 139 | 3.68E-18 | ||
| SMART | 134 | 271 | 138 | 0.0021 | ||
| Gene3D | 135 | 271 | 137 | 4.30E-16 | ||
| ProSiteProfiles | 194 | 263 | 70 | 10.341 | ||
| Pfam | 195 | 270 | 76 | 1.20E-07 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein dephosphorylation | The process of removing one or more phosphoric residues from a protein. | ||
| Molecular function | Protein tyrosine/serine/threonine phosphatase activity | Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate. | ||
| Biological process | Dephosphorylation | The process of removing one or more phosphoric (ester or anhydride) residues from a molecule. | ||
| Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. |
Expression pattern of Lj5g3v2240850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2240850.1, powered by CORGI.
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