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Lj1g3v4107140.1

Overview

Field Value
Gene ID Lj1g3v4107140
Transcript ID Lj1g3v4107140.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: dual specificity protein phosphatase 12-like isoform X2 [Cicer arietinum] gi|502108122|ref|XP_004493392.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM00195
1 188 188 6.90E-36
IPR020422
ProSiteProfiles
PS50054
1 190 190 29.764
IPR020422
Gene3D
G3DSA:3.90.190.10
4 50 47 4.40E-39
IPR029021
PANTHER
PTHR10159:SF293
5 42 38 2.80E-106 –
PANTHER
PTHR10159
5 42 38 2.80E-106
IPR024950
SUPERFAMILY
SSF52799
5 54 50 2.18E-29
IPR029021
PANTHER
PTHR10159
93 189 97 2.80E-106
IPR024950
PANTHER
PTHR10159:SF293
93 189 97 2.80E-106 –
Pfam
PF00782
95 187 93 1.10E-28
IPR000340
SUPERFAMILY
SSF52799
95 191 97 2.18E-29
IPR029021
Gene3D
G3DSA:3.90.190.10
97 197 101 4.40E-39
IPR029021
CDD
cd00127
100 186 87 9.33E-38
IPR020422
ProSiteProfiles
PS50056
111 168 58 14.517
IPR000387
ProSitePatterns
PS00383
133 143 11 –
IPR016130
PANTHER
PTHR10159
277 360 84 2.80E-106
IPR024950
PANTHER
PTHR10159:SF293
277 360 84 2.80E-106 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004725
Molecular function Protein tyrosine phosphatase activity Catalysis of the reaction: protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of
GO:0008138
Molecular function Protein tyrosine/serine/threonine phosphatase activity Catalysis of the reactions: protein serine + H2O = protein serine + phosphate; protein threonine phosphate + H2O = protein threonine + phosphate; and protein tyrosine phosphate + H2O = protein tyrosine + phosphate.
Subterm of
GO:0016311
Biological process Dephosphorylation The process of removing one or more phosphoric (ester or anhydride) residues from a molecule.
Subterm of
GO:0016791
Molecular function Phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj1g3v4107140.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v4107140.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.