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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR025774
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.435s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v3639870.1
n.a. gamma-tocopherol methyltransferase [Lotus japonicus] gi|66732623|gb|AAY52459.1| chr3 44290552 44293377 +
2 domain predictions
2 GO terms
Lj3g3v3639870.2
n.a. gamma-tocopherol methyltransferase [Lotus japonicus] gi|66732623|gb|AAY52459.1| chr3 44290884 44293377 +
2 domain predictions
2 GO terms
LotjaGi2g1v0263300_LC.1
n.a. Gamma-tocopherol methyltransferase; TAIR: AT1G64970.1 gamma-tocopherol methyltransferase; Swiss-Prot: sp|Q9ZSK1|GTOMC_ARATH Tocopherol O-methyltransferase, chloroplastic; TrEMBL-Plants: tr|Q4U3Z5|Q4U3Z5_LOTJA Gamma-tocopherol methyltransferase; Found in the gene: LotjaGi2g1v0263300_LC LjG1.1_chr2 73235907 73239739 +
2 domain predictions
2 GO terms
LotjaGi3g1v0543900.1
n.a. Methyltransferase; TAIR: AT1G64970.1 gamma-tocopherol methyltransferase; Swiss-Prot: sp|Q6ZIK0|GTOMC_ORYSJ Probable tocopherol O-methyltransferase, chloroplastic; TrEMBL-Plants: tr|Q4U3Z5|Q4U3Z5_LOTJA Gamma-tocopherol methyltransferase; Found in the gene: LotjaGi3g1v0543900 LjG1.1_chr3 96002227 96006394 +
2 domain predictions
2 GO terms
LotjaGi3g1v0543900.2
n.a. Methyltransferase; TAIR: AT1G64970.1 gamma-tocopherol methyltransferase; Swiss-Prot: sp|Q6ZIK0|GTOMC_ORYSJ Probable tocopherol O-methyltransferase, chloroplastic; TrEMBL-Plants: tr|Q4U3Z5|Q4U3Z5_LOTJA Gamma-tocopherol methyltransferase; Found in the gene: LotjaGi3g1v0543900 LjG1.1_chr3 96002227 96006394 +
2 domain predictions
2 GO terms