Domain Predictions — View

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PS51581

Source: ProSiteProfiles

Description

SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0008168 View details of GO:0008168 AmiGO InterPro QuickGO	Molecular function	Methyltransferase activity	Catalysis of the transfer of a methyl group to an acceptor molecule.	Subterm of GO:0016741
GO:0032259 View details of GO:0032259 AmiGO InterPro QuickGO	Biological process	Methylation	The process in which a methyl group is covalently attached to a molecule.	Subterm of GO:0008152

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj3g3v3639870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-tocopherol methyltransferase [Lotus japonicus] gi\|66732623\|gb\|AAY52459.1\|	Domains G3DSA:3.40.50.150 IPR013216 IPR025774 IPR029063 PF08241 PS51581 PTHR10108 PTHR10108:SF708 SSF53335 cd02440	10
Lj3g3v3639870.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-tocopherol methyltransferase [Lotus japonicus] gi\|66732623\|gb\|AAY52459.1\|	Domains G3DSA:3.40.50.150 IPR013216 IPR025774 IPR029063 NON_CYTOPLASMIC_DOMAIN PF08241 PS51581 PTHR10108 PTHR10108:SF708 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53335 SignalP-TM_GRAM_POSITIVE cd02440	16
LotjaGi2g1v0263300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gamma-tocopherol methyltransferase; TAIR: AT1G64970.1 gamma-tocopherol methyltransferase; Swiss-Prot: sp\|Q9ZSK1\|GTOMC_ARATH Tocopherol O-methyltransferase, chloroplastic; TrEMBL-Plants: tr\|Q4U3Z5\|Q4U3Z5_LOTJA Gamma-tocopherol methyltransferase; Found in the gene: LotjaGi2g1v0263300_LC	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.150 IPR025774 IPR029063 NON_CYTOPLASMIC_DOMAIN PS51581 PTHR43591 PTHR43591:SF5 SSF53335 TRANSMEMBRANE	10
LotjaGi3g1v0543900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Methyltransferase; TAIR: AT1G64970.1 gamma-tocopherol methyltransferase; Swiss-Prot: sp\|Q6ZIK0\|GTOMC_ORYSJ Probable tocopherol O-methyltransferase, chloroplastic; TrEMBL-Plants: tr\|Q4U3Z5\|Q4U3Z5_LOTJA Gamma-tocopherol methyltransferase; Found in the gene: LotjaGi3g1v0543900	Domains G3DSA:3.40.50.150 IPR013216 IPR025774 IPR029063 NON_CYTOPLASMIC_DOMAIN PF08241 PS51581 PTHR43591 PTHR43591:SF5 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53335 SignalP-TM cd02440	16
LotjaGi3g1v0543900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Methyltransferase; TAIR: AT1G64970.1 gamma-tocopherol methyltransferase; Swiss-Prot: sp\|Q6ZIK0\|GTOMC_ORYSJ Probable tocopherol O-methyltransferase, chloroplastic; TrEMBL-Plants: tr\|Q4U3Z5\|Q4U3Z5_LOTJA Gamma-tocopherol methyltransferase; Found in the gene: LotjaGi3g1v0543900	Domains G3DSA:3.40.50.150 IPR013216 IPR025774 IPR029063 PF08241 PS51581 PTHR43591 PTHR43591:SF5 SSF53335 cd02440	10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02440	CDD	1	20.00