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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR026896
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.648s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0080949.1
n.a. proline-rich protein precursor [Glycine max] gi|351722127|ref|NP_001237489.1| chr0 31508594 31513436 -
2 domain predictions
1 GO term
Lj0g3v0316139.1
n.a. proline-rich protein precursor [Glycine max] gi|351722127|ref|NP_001237489.1| chr0 165065408 165068708 +
2 domain predictions
1 GO term
Lj4g3v3099310.1
n.a. PREDICTED: cleavage stimulation factor subunit 2-like isoform X2 [Cicer arietinum] gi|502163524|ref|XP_004512866.1| chr4 41232657 41236100 +
2 domain predictions
1 GO term
Lj5g3v1888380.1
n.a. PREDICTED: cleavage stimulation factor subunit 2 tau variant-like [Cicer arietinum] gi|502118796|ref|XP_004496403.1| chr5 26916591 26924966 -
2 domain predictions
1 GO term
LotjaGi4g1v0448400.1
n.a. Cleavage stimulation factor subunit 2; TAIR: AT1G73840.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9M9G6|CTF64_ARATH Cleavage stimulating factor 64; TrEMBL-Plants: tr|C6T790|C6T790_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0448400 LjG1.1_chr4 82078517 82083655 -
2 domain predictions
1 GO term
LotjaGi4g1v0453000.1
n.a. Cleavage stimulation factor subunit 2; TAIR: AT1G73840.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9M9G6|CTF64_ARATH Cleavage stimulating factor 64; TrEMBL-Plants: tr|C6T790|C6T790_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0453000 LjG1.1_chr4 82508750 82517947 +
2 domain predictions
1 GO term
LotjaGi4g1v0453000.2
n.a. Cleavage stimulation factor subunit 2; TAIR: AT1G73840.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9M9G6|CTF64_ARATH Cleavage stimulating factor 64; TrEMBL-Plants: tr|C6T790|C6T790_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0453000 LjG1.1_chr4 82508762 82512316 +
2 domain predictions
1 GO term
LotjaGi5g1v0284300.1
n.a. RNA-binding protein; TAIR: AT1G71800.1 cleavage stimulating factor 64; Swiss-Prot: sp|Q9M9G6|CTF64_ARATH Cleavage stimulating factor 64; TrEMBL-Plants: tr|I1NH73|I1NH73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0284300 LjG1.1_chr5 60100674 60109880 -
2 domain predictions
1 GO term