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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0284300 |
| Transcript ID | LotjaGi5g1v0284300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA-binding protein; TAIR: AT1G71800.1 cleavage stimulating factor 64; Swiss-Prot: sp|Q9M9G6|CTF64_ARATH Cleavage stimulating factor 64; TrEMBL-Plants: tr|I1NH73|I1NH73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0284300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:60100674..60109880) extracted from Lotus japonicus Gifu genome v1.2.
CATAAATAAAAAAAAAGTGCATCTGAAATCAAATCAAATCAAATCAAATATATTACAAAAAAAAAAAAAAAAAACCCTCG CACTCATAGAAGATCGAAACGCAGAGCTCTGGTGAACAAGTAATGGTGGTGAGGAGGAAGAAGATGGAGCAGCAGAGCTT CACCTTCTTCTTCTGCTGTTGATTTCATGGCTTCCTCTCAGTCCCAGCATCGTTGCGTTTTCGGTATCTCTCTCTCCCTC TCCCTCTTTTCTTCTCGCTCGTGATTTATTCATAGCTTTTGGGTCATTGGGTATCAATAGGAATCGAAAATTCCGATGAA AAAACACAAAAACGAAGTCTTTATTGCCCTCACTTCCTTTTTTCAATAAAAAGATTTGATATTTCCATCTTGAATGATGT TCTTGATATTGAAATTTGTGAAATTTATGACCTTTGGTTGATGGGGTTGTGGCAATTTTGGTGATTCTGCTGTAGTTGGG AATATACCGTATGATGCCACAGAGGAACAGCTTATTGAAATCTGCCAGGAGGTTGGTCCTGTAGTATCATTCAGGTAACA AATTTAAGCTCTTGTTTACTAGATTTTAATAACTTTTTTGCAGCAATTTATGATTTAGTCTACTCTGCAATTAGTGGAAC TGGTTCTAGAGACAATATATCAAACTAGAAGTAGCTTGATCCAAGAGGGGTAGCTCAGTTGGCAACACAGGCTGAGTGTG TGGGAATTGCTCTCGGGTTCAATCCCCACACAATACACTCTGGGGGGAGGGATGATGATGAATCTTAACTGTGACTAAAT CCTGAATCTGGTGGCATCCAAGGGGTGACCGAGTACTGGATGTTTATACCAAAAAAAAAAACTAGAAGTAGCTTTATACT CACTGAAACTTGCATGATTTGTTTTTGATGTACTAGTGGATAAGTTTCATTGTGACTTTGTGAGGATTTTTACTGAAATT TCTTGGAATTCTCTTTTGCCTGTCTGCCTGTGGTTTATTTGGTTGAAGTATGTCGATTTGTTTTTATTCACAGATTAGTT ATTGACCGAGAAACCGGGAAACCGAAAGGCTATGGGTTCTGTGAGTATAAGGATGAAGAGACAGCTTTAAGTGCTCGTCG AAATCTTCAGGGTTATGAAATTAATGGGCGGCAGTTGCGTGTTGATTTTGCTGAAAATGATAAAGGGAATGATAGAAATA GAGAACAGGTAAACTGTTGGAATTTCTTGAACTAGCGATACTTTTCCTAAATGTTGTCTATATTTTCTTTAAAAAAAGTT CTGGGCATCACCCGAAAATTAGCTCAGTTCCTAACTATTCATAGAACCATATGTGCCTGAAGGTCATATATATTGGGACA TGTGTTGTTTCATTTGTGCTTATTATTTTCAGTTAGAGTTGTTTTTATAAGCCATCATATTTGATCAATGTTGGACTAAA AGGGCAAACCTGGTGCTATAGCCTATAAAGCTCCCGCTATGTGCGAGGTCCAGGAAGGGGCCAAACTCACTTTGTGGATC TAATGCAGTCTTACCTTGCATTTGATCAATGCAGTCTTACCTTGCATTTTTGCAAGAGACTGATTTCATGGCTTGAACTT GTGACTGCAAAGTCACATGACAACAACCTTACCATTGCGCCGAGGTTCGCCCTCTAATGTGGGGCTAAAAGGGAAATAAT TATCAACGTATTCAAATATTACACTTTTTACCAAATAAATTAAGCTACCCACAATTACTCAAATTTGCGAAGCATTAAAG CCTTTAATCTTATGGAAACACTAAAGTAAGTGAATACTTTAAAAGTCATTATTAATTCCAAAATTAATGTCAAAGGCATT CAGGACAACGTAGACATTTGTCGTTGCTGTTCCCTTCTCCAACCCATTTTTTTCTCATTTGTGTGGGTCATATTAGAAGT GATGTGTTAAGTGTCATTTTAGTCTTGGATTAAAATGTTTTTTTTCCCCTTTTACTGCAGGGTCGTGGTGGGCCTGGAAT GACAGCAAATGTTGGTTGGTTCTTTGTGATCTCTATTATTATATGTTATTACAAATTATTTCATGGATATAATCTCTGCA TGATTTATAGTTCTTGTGTTTTCATTTTCTCCTTTATGTATTGAAGACACTCAGAAACAAGCAGGCATTCCAGTTGTTCA TGGGGAAGCTGTTCAGCATCAACCTATTGGTCTTCATATTGCCATATCAGCAGCAACTGCCATGACAGCAGCTCTAGGTG GTCCTCAGTCTGGCATCCATTCTAACCAAAATAGTTTGCAGAGTCAGTCAGCATTGGCACATGATCCTTTAACTTTGCAT CTGGCCAAAATGTCCAGGTTTCAATTGATTGAGGTTATCTCTGAGCTCAAGGTAACTATTGGGTAAGCTAATTTCAACTT CATAGATAAATTTCTCCTTTCTTGACTTATATGTTCTTGTTATGATGGCAGGGAATGGCTACACAAAACAATGATCTGGC TCGCCAGCTGTTGCTTTCGAGGCCACAGTTGCCCAAGGCACTTTTTCAGGTATGAAATTTTCTCCCATATAATTCCTTTC TTCATTTATGCAAGCACAACATTCTTTAATGACCAACTTGTCTCGATTTACTTGAGCTATGAGTCTATGACATAGATGTC CTTTATGGTAGCTGTTCATTGATAGAACCCTGATTTTATTGATAGAACTGTTTCTGTAAAAGAACCCTAATTCCCAATTT GGGAATCAGAGAAGATACATGAGAGAGATGCCAAACACCCTCCCTAACCCTAGAAAGAGAACCACTTCTCTCTCTAAACC CAAATTCCAAATGAATACCAAGATACCACTAACTCTCTAATGTCTGTTATTTATAGGCTACATGCCTCAATAACATTCTA ACTAACTCACTAAGTATAACTAACTAACTAACTAACCTTGAGTTCCTATCAATACTCCCCCCCCTGAAAATTCACCTTGT CCTCAAGGTGAAGGACCAAATGCAACTACAAAAAAGAAAAAATATTCCACAGTTCCAATGTTGTCTATTACAGCTGCCAC CAAGATCCCATTGCTCCTCTTCAATGCTCTCATTTGTAGTCAACTCCAAAGATTCAACTGAAGCCTGGAAGTCTCCCAAA TCTCCATAGCAGAACATTTGCAAAATTCACTTTGACCCTTTGAAATGGGTGTTGTTCCCGGCTGCATCATGTAATTGGCT AAATGGAAAATACCACTTCCACCTGGATCCCATAGTATGAAGAAAATAGCCTCTGACATGTATGAGTGGTTGAACACCTT CCTTGGTTGCCCAAAACACATTCTGCTAAGAGGCATAATGCAGAAATTCCAGCAGATTCCCACTGGATCCCACTGCTCTT CTTCATTGCCAACATCAGTAGTTAACTCCACAATCTCAACTAAAACTTGAAAATCACCTGAGTCACTTTCCCACAGCACT TGGAAAATTACTTGTGACTCTTGTTTGCTGGCTTCTTGTTGTCTCATATCAATGGGTAAATTGGGTTTTAGCCCAAAGTA TGATAAGTTGACCCAACCCATACGAACAACCTTGTTTTCCATAAAAACTCTGCTTCTCTTGATCAGACCAGCTCTATCCT TCTCTAGGGCCCAATTTTTTCCATTAGTGAAATGGGTATGGCCCATTCTGTGAAGAAAAAGTTCCAGCTGGTACCCAATT ACTGCTGGCCTTGTCACCTTGTTCCAAGTATCCCTGAAGCAGTCCCTCACATGCATGCTTCTTCTTACTGGAACAGCTTG CTTTGCTTGCCCCCAATTGGCTACTATCTCTGTTTCCACCTCATCCAGAGTTGAATCAAATGGTTTTCGCTGTAACTTTA CCTGAACGCTTGCTGTCTTCGTTTCCATGGCTTGCGGGGTTACTCTCATCATCACCTCTGTGGTCATTACTAAATCTGCA AACTTTGCATGAGCAACCGATAAATCCGGCGGTTCCGGCGGTGGTTGTTTCTCCTCCGGCGACCTACAAGGATATGGACC CAACAACCCTGACACGAGTCTTCTGCTCCACTCTGATGACCCTCCCTCATGCAGCAATCGGACTGCGTTATCAGATGGTG TCGGTGGCAGCCATTGGAACGAGCCCATCACCATCAACGAAAAACCAAGATTTGATGATTCACTAATGAAATCCCAACCA CCCTGGTGCGACAGCTTCGGCGAAAATCGCTCAATCGCCACCGTCGACGATACTCGTTCTACGCTCAACGCACGTTCTTG CTCTGTCTCTGCCGCAACTCGTTCTTTCTCCTCCGCCTCAGGCTCTGGTTTCTGCGGTGCTTCAACCTTTGATTCCCCCT GAATCGCCCTCACCGCCGTGGTCTCAAGATTCTCCGGCGACGCCCCTGCTTCAAAGGTGCGGGTTTTCTCTGCCATTGAT GTAGACCCTGAATTCTTTTGCCACTCCTCCTCTGTTACTCGATTGTCCTCCACTAGTTCAAGATTGAGTTGCTTCATCTC AGAAATGAAAACCCCCTCTGTTTCAGACGCTTGCTCATCCACCGTAGCGTCTCTCTCTTCTTCCACCGTTGTCTCCGATT CACCCTCTGTTCCAAGATTGGCTTTCTGAATCGCAGAGGTTGAGTCTTCTCCTGCTTCAGAAGCTTGCCCAGCCACCGCT GCGGTCTCACTTCCCCTCAACAACGCCGCTGCTGCCGCCGTTTGCTCAGCCTCGATTGCCGCCTCTGATTCTTGCCTTTC TTGTTCCATCTTTTGCCTTCGCTCATTCAGATCTCTCAACTGCTCTTTAAGTGACTCGTGTTCCTTTCTGCTCTCTGCGA ATTCTTTCTGCAACTCTCGCAACAGGCCAATGATTTCCTTCTTTTCCCTTGATGAGAGAAAATTCCCGAAATCTGCAGCC ATCTCCTTCTTGATGTTGTTTTGCTGTGGGATCTTCTTGGCCAGGCACCTGAATCGGTGCTCTGATACCAATGATAGAAT CCTGATTTTATTGATAGAACTGTTTCTGTAAAAGAACCCTAATTCCCAATTTGGGAATTAGAGAAGATACATGAGAGAGA TGCCAAACACCCTCCCTAACCCTAGAAAAAGAACCACTTCTCTCTCTAAACCCAAATTCCAAATGAATACCAAGATTCCA CTAACTCTCTAATGTCTGTTATTTATAGGCTACATGCCTCAATAACATTCTAACTAACTCACTAAGTATAACTAACTAAC TAACTAACCTTGAGTTCCTATCATTCATGCTGACGAAATGCTTGATATCAAATTGTGTGATGAGGAATGAACAAATTTGA TAAGAATGATAGAATTAAGATATTTATATGGTGGAGAACAATTTAAAATCTTACAGAGGTTTGGGACATTTTCATATGCA AATGAAAAATGAATAATTGTACGATCTTTTCCTCACTCTCGTAATTCTCTTTCCATAAAATAGACGTTTATTGTTTGGGA TGCCATTTTCAATCGTTCAAATTGGTGCTGTTCTATGTCTCTTCATTTTGATAAATCAAAACATTTCTGGTTTCTCTTTC ATTCAAAGTTAAATTTTGTTGGCATGTTCTATTTGACAAACAATATATGTTACTTTTTTGAAATATAGCCTCTAGGTGTT TTGTGCTTGTCTCATCCAAATTTATGATTTAGTTTCATTGGACCAATGTCTAGAGAAATTCATGGTCTGTGGATAATTTT TTTTTTGAGCACTATGTTCATAATTTGTTGTATTTGCAGGCTCAGATAATGCTACAAATGGTGACCCCCCAAGTGGTTTG TTTCACTACCTTTTTGCTCGATGTCCATTCCATTTATTTTTTATACCAAATCTTTTTTACGAGGACTTAATATTTGCTTT AAGATGCTGTTCCAAAACCTGAGGCTCAGGTTTAATAACAACCCAGTAATAAAGTAAATAAAGTTCAAATAACTGAAACA ACTTCCGTAAAAATGCCTATTATAAAAATACTAAGATACCTTGGGACTGAAAATATTAAACTGATTAAAGTAGCAGCTTT CTGAGATAATAACCTTAAACAATTTTGATCTATTAAGGTCTATGTAATATCAAATAAAAATTAAATTTATACCAGGCTAC TGATATCTTTTTTCCTTTAAACGTATCCTTCTAGATACTACAACCGCCTCCATCAGTTTTATCTTTTGAACTTTCTTTTC ATGATAATTTTTGCAGTTACAAATGCCAAACCTTAGAATGGTTTCAGATCAAACCTCACCGTCTTTAGCGAATGAAGGTC CTGGGGGTCAGCCAGCATTGCTCCAAACTCTGTCTGGCCTACCTCTTTATGGACAGAATAAGATGCAATCTGGTTTGACA CCTTATGTTGAAGAAGGCCAAGTCAGCATCATGCCTCATAATCCTTTGGCCCCTAATCAATTAACTGCTCATTCGAAGCC TCCTGTGCAGCCTAGAATACCCTTACAACATTATCCAACCAACCAAGTTGTACAGATTGGAACAATGTCAGGGCAATCTA ATTTGGTACTTCCTTCTGTGCGTCCCCCATCTGGGGTCGGTTTGCCTATTAGGCCTCCAATTCAACCGACAAGTTCAACT GCTTTGAACCAGCAAATGCAAGGCTCTTTGCCACATTCAGTACATGTTGGACGCTCAACTGGGGCACATAATATTCAAAT GGTTCGTCCAGATACAAGCTTTCAGGTACCACACATTTCTTGTATTTTTGTGTTTGAATGTTGCATTGATGTGAGTATCT TTACAAAATTGTCATGATAATTCCTATATGGTGCAGCTGTCCATGAACTTATAAAGTACACTATCCAAACTGTCATGATA ATTCCTAAAATTTTTATAGGCTGTTTGTTAAACACTCTCTTCGTTAGAAAGGTGAAAACAGAAATAAGGAGCAAAGAGCT CCTTCCTATAAACTGAATATTTTCAGTTTTTAACAATCCCTAAGGTGTTGTTGGGTGTAGGTGGAATGATTTTGGATTCA AAAGTGAAAAATCTGAAAGTGTCTCTGTTCCCCCATCGTTTTTTATATTCTAGGATTGTAAAAAGATAGTTGTTTTATGA AGGAGAGAACCATGGAGCACCTTTGATGTCTCTACATCTTCTACATTATTTACCTTAAATTGAAATTTCAAGAAAATTTT GCTCGAGTATAATTTGCTATGTGTAGAAGCTGATTTTCTCTTCAAGTTTTGCCAGTGCTGAGCTGGACACAATTTCTATT TCTTTAACATATATATCTTTTTCTACCAAAAACATGTATATCTTTAAAATAAAGTATCTAACATCATTTATTAAAACAGC CTGGCCCTTCCACGAGTAGCAGTGCATATTCAAATACTGGAGTAGAGAAAACAAACATGGTTCAGGATTTTTCAGAATCT TTCACTCACCCATCAAAATTCATGAGATCAGATAAGGGAAGGATCCCTTCTCTTCCTGCGGGGATTAAAGACTTGCCTGT CACCATTGGATCTTCCCATGTTCTTGGAAGTAGCTCATTACCTGCACCTACAGCCTCTAAAGCAGAAGTGCGGTACCCTG AGCCGCAATCTTCTCAGGTATGTTTAACTTGGCGATTCATAGGTGACAAGTGACAGCGAGCAATTTTCTGAATGAGTTTA TTCGATGATTTATCATTGGTTTGTTTGTTTGAATTTAGAAGTCGAAATTATGGCAGCGTCATCCATTTTTAGGTTCTTAT ACTGAATAGCGTTTCATTTGGTTGCTAAAAAGCTATTCTAACTTTATAGAAAGGATGTCAGGAATACACCTCAGCATTGC CTAATGTTGCATGTTTCTTAAATAAATACTGAAATTGACCTTAGATTGTGTGCATGCTGTAGTTGTTTAAACTGTAAAGC GTGAAATAATTGACATATGTAGCTTACAATTATGCTAGATAGATTTTTTATCTCCTTATAAGATATCACTGCCAAGTGAA TACATTAATGCTTTGCACACATGGCCAATGAGCCAGGACTCTTCATTCAGTATTTTCGAGCATTTTCTGACATAGTTGAT TACTTGATTGACACCATTCAGAACCATCTTTAGATCGCTCGTATATACCTTGGGGGTCAAGACCATCTAGTTGGTGTGGA ACTAGAGATTGGGAAAATTACCTTCCTGTACTTAAGGAATCAGGCCAACTGCCTTAGTTATTACTGTCTGTTATAACTTA TAACCTAAAGTCTAAATTAGGAGAGGGGTTTTATGCATTGGTAGTGTACAACGCTTATTTTGGTTAAAATACAACTTTTT CTTTTGCCTGAAAACACCTTTAATGTCTGATTTCCAACATTCCTGCTTTTAATGTTTCACATGATATTGTTTTGATTAGT TTTACCACAACGAACTCTATCTTTTTTTATCAATGTAGCCAGTGATTCCAGATTTGTAAAATCATTATTCTTGTTTTATT TGCTCAGCCCCAGCTTCCACCTGATGTGGAGTCTGTTTTACTGCAACAAGTGTTGAATCTAACACCAGAGCAATTGAGTT CCTTGCCACCAGAGCAGCAACAACAGGTCATTCAGCTCCAGAAGTCTCTTCGACAAGATCATATGCAGCCTTCATAACTG ACAGGAACACATCAGAACAGTTAAAAAAAATAATGCAGCTACTTATTTTTTAGGCAAGGTAGTCCATTTTCCCAACTCAG CTTCCAGAAGATGGTTTGACCGAAACCAAGCCTGTCAGCTCAGCTTGTATATTAGCATTTGCTGTAGATTAGGTTCAGAA TATCGAAATTCTTTTGAGCACTAGCACTTTGTAATTTATTTTCTTATTACTTTCCAAACATTTGATGCTGAGGTGAGGAG CTCCACATGAGCGTGTATAACCCTTTAGAAGGGAGATTTTGTACAACAATAATTTTGGTGATGAAAATTTTGTTGTTAAC TTGACTTTCCTGGTGTGTGCTGAGCATCTTTTCCTTGTTATTTGAGCTATATCCATATACATGAAGCTGCGTTCTGTTGT TAAGGCCACGCCTGTGTTTGGATAAACGTTGGGAGTTTCGATTCTGATTCTACTAAATTGGTAGGGTAAAAGTGAGTTAA AATGATGTGATTTATGTATGGTAATGTTATGAAGTTCAGTTGTAAAATTTCAGAATTGATTATGTTTAATTGAAGCAACT GTTTGTTGTGACAAGTGGAATTGATTATATAAAATTGATCCCGCTTTAGTGTTACACCCAATTCCCAAACATCATTTCAA CTGGTAG
CDS sequence (LotjaGi5g1v0284300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCTCTCAGTCCCAGCATCGTTGCGTTTTCGTTGGGAATATACCGTATGATGCCACAGAGGAACAGCTTATTGA AATCTGCCAGGAGGTTGGTCCTGTAGTATCATTCAGATTAGTTATTGACCGAGAAACCGGGAAACCGAAAGGCTATGGGT TCTGTGAGTATAAGGATGAAGAGACAGCTTTAAGTGCTCGTCGAAATCTTCAGGGTTATGAAATTAATGGGCGGCAGTTG CGTGTTGATTTTGCTGAAAATGATAAAGGGAATGATAGAAATAGAGAACAGGGTCGTGGTGGGCCTGGAATGACAGCAAA TGTTGACACTCAGAAACAAGCAGGCATTCCAGTTGTTCATGGGGAAGCTGTTCAGCATCAACCTATTGGTCTTCATATTG CCATATCAGCAGCAACTGCCATGACAGCAGCTCTAGGTGGTCCTCAGTCTGGCATCCATTCTAACCAAAATAGTTTGCAG AGTCAGTCAGCATTGGCACATGATCCTTTAACTTTGCATCTGGCCAAAATGTCCAGGTTTCAATTGATTGAGGTTATCTC TGAGCTCAAGGGAATGGCTACACAAAACAATGATCTGGCTCGCCAGCTGTTGCTTTCGAGGCCACAGTTGCCCAAGGCAC TTTTTCAGGCTCAGATAATGCTACAAATGGTGACCCCCCAAGTGTTACAAATGCCAAACCTTAGAATGGTTTCAGATCAA ACCTCACCGTCTTTAGCGAATGAAGGTCCTGGGGGTCAGCCAGCATTGCTCCAAACTCTGTCTGGCCTACCTCTTTATGG ACAGAATAAGATGCAATCTGGTTTGACACCTTATGTTGAAGAAGGCCAAGTCAGCATCATGCCTCATAATCCTTTGGCCC CTAATCAATTAACTGCTCATTCGAAGCCTCCTGTGCAGCCTAGAATACCCTTACAACATTATCCAACCAACCAAGTTGTA CAGATTGGAACAATGTCAGGGCAATCTAATTTGGTACTTCCTTCTGTGCGTCCCCCATCTGGGGTCGGTTTGCCTATTAG GCCTCCAATTCAACCGACAAGTTCAACTGCTTTGAACCAGCAAATGCAAGGCTCTTTGCCACATTCAGTACATGTTGGAC GCTCAACTGGGGCACATAATATTCAAATGGTTCGTCCAGATACAAGCTTTCAGCCTGGCCCTTCCACGAGTAGCAGTGCA TATTCAAATACTGGAGTAGAGAAAACAAACATGGTTCAGGATTTTTCAGAATCTTTCACTCACCCATCAAAATTCATGAG ATCAGATAAGGGAAGGATCCCTTCTCTTCCTGCGGGGATTAAAGACTTGCCTGTCACCATTGGATCTTCCCATGTTCTTG GAAGTAGCTCATTACCTGCACCTACAGCCTCTAAAGCAGAAGTGCGGTACCCTGAGCCGCAATCTTCTCAGCCCCAGCTT CCACCTGATGTGGAGTCTGTTTTACTGCAACAAGTGTTGAATCTAACACCAGAGCAATTGAGTTCCTTGCCACCAGAGCA GCAACAACAGGTCATTCAGCTCCAGAAGTCTCTTCGACAAGATCATATGCAGCCTTCATAA
Protein sequence (LotjaGi5g1v0284300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSQSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQL RVDFAENDKGNDRNREQGRGGPGMTANVDTQKQAGIPVVHGEAVQHQPIGLHIAISAATAMTAALGGPQSGIHSNQNSLQ SQSALAHDPLTLHLAKMSRFQLIEVISELKGMATQNNDLARQLLLSRPQLPKALFQAQIMLQMVTPQVLQMPNLRMVSDQ TSPSLANEGPGGQPALLQTLSGLPLYGQNKMQSGLTPYVEEGQVSIMPHNPLAPNQLTAHSKPPVQPRIPLQHYPTNQVV QIGTMSGQSNLVLPSVRPPSGVGLPIRPPIQPTSSTALNQQMQGSLPHSVHVGRSTGAHNIQMVRPDTSFQPGPSTSSSA YSNTGVEKTNMVQDFSESFTHPSKFMRSDKGRIPSLPAGIKDLPVTIGSSHVLGSSSLPAPTASKAEVRYPEPQSSQPQL PPDVESVLLQQVLNLTPEQLSSLPPEQQQQVIQLQKSLRQDHMQPS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 519 | 519 | 2.5E-177 | – | |
| Gene3D | 1 | 115 | 115 | 2.4E-30 | ||
| PANTHER | 1 | 519 | 519 | 2.5E-177 | – | |
| SUPERFAMILY | 5 | 104 | 100 | 1.61E-31 | ||
| ProSiteProfiles | 9 | 87 | 79 | 19.229 | ||
| SMART | 10 | 83 | 74 | 5.8E-28 | ||
| Pfam | 11 | 81 | 71 | 1.1E-22 | ||
| CDD | 11 | 85 | 75 | 1.48887E-51 | – | |
| MobiDBLite | 85 | 108 | 24 | - | – | |
| Pfam | 158 | 230 | 73 | 4.4E-16 | ||
| MobiDBLite | 384 | 403 | 20 | - | – | |
| MobiDBLite | 451 | 485 | 35 | - | – | |
| MobiDBLite | 469 | 485 | 17 | - | – | |
| Gene3D | 483 | 524 | 42 | 6.8E-6 | ||
| Pfam | 488 | 520 | 33 | 4.8E-9 | ||
| MobiDBLite | 498 | 526 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Biological process | MRNA 3'-end processing | Any process involved in forming the mature 3' end of an mRNA molecule. |
Expression pattern of LotjaGi5g1v0284300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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