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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR027109
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.878s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0226409.1
n.a. PREDICTED: SWR1-complex protein 4-like [Glycine max] gi|356572817|ref|XP_003554562.1| chr0 116952649 116955522 +
2 domain predictions
5 GO terms
Lj0g3v0226409.3
n.a. PREDICTED: SWR1-complex protein 4-like [Glycine max] gi|356572817|ref|XP_003554562.1| chr0 116952649 116957427 +
2 domain predictions
5 GO terms
Lj0g3v0226419.1
n.a. PREDICTED: SWR1-complex protein 4-like [Glycine max] gi|356572817|ref|XP_003554562.1| chr0 116953884 116957590 +
2 domain predictions
5 GO terms
Lj1g3v4831860.1
n.a. PREDICTED: SWR1-complex protein 4-like [Glycine max] gi|356572817|ref|XP_003554562.1| chr1 58562860 58566810 +
2 domain predictions
5 GO terms
Lj1g3v4836220.1
n.a. PREDICTED: SWR1-complex protein 4-like [Glycine max] gi|356505649|ref|XP_003521602.1| chr1 58638298 58640431 +
2 domain predictions
5 GO terms
Lj1g3v4836220.2
n.a. SWR1-complex protein [Medicago truncatula] gi|357511425|ref|XP_003626001.1| chr1 58638298 58640431 +
2 domain predictions
5 GO terms
Lj3g3v1603840.1
n.a. PREDICTED: SWR1-complex protein 4-like [Glycine max] gi|356572817|ref|XP_003554562.1| chr3 20290223 20297409 -
2 domain predictions
5 GO terms
LotjaGi1g1v0757000.1
n.a. SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1; TAIR: AT2G47210.1 myb-like transcription factor family protein; Swiss-Prot: sp|Q8VZL6|SWC4_ARATH SWR1-complex protein 4; TrEMBL-Plants: tr|G7KTN9|G7KTN9_MEDTR DNA methyltransferase 1-associated protein; Found in the gene: LotjaGi1g1v0757000 LjG1.1_chr1 133030761 133043764 +
2 domain predictions
5 GO terms
LotjaGi1g1v0757000.2
n.a. SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1; TAIR: AT2G47210.1 myb-like transcription factor family protein; Swiss-Prot: sp|Q8VZL6|SWC4_ARATH SWR1-complex protein 4; TrEMBL-Plants: tr|I1NBE9|I1NBE9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0757000 LjG1.1_chr1 133035637 133043706 +
2 domain predictions
5 GO terms
LotjaGi5g1v0242300.1
n.a. SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1; TAIR: AT2G47210.1 myb-like transcription factor family protein; Swiss-Prot: sp|Q8VZL6|SWC4_ARATH SWR1-complex protein 4; TrEMBL-Plants: tr|V4U6K6|V4U6K6_9ROSI Uncharacterized protein; Found in the gene: LotjaGi5g1v0242300 LjG1.1_chr5 55066502 55074263 +
2 domain predictions
5 GO terms