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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0047200 |
| Transcript ID | LotjaGi3g1v0047200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Proton pump interactor, putative; TAIR: AT4G27500.1 proton pump interactor 1; Swiss-Prot: sp|O23144|PPI1_ARATH Proton pump-interactor 1; TrEMBL-Plants: tr|A0A151S5G2|A0A151S5G2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0047200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5024946..5030006) extracted from Lotus japonicus Gifu genome v1.2.
CTCTCATTCATTTCCTTCCTTTACATCCCCACTTAATATTTCCCTAAACACAATTAAAAAATAAAGAAATAGAGGTAAAC ACACTACTTGCTTTTCCTAAGACAAAGAAAACATTAAAAGAACAACCTTTGCAAATCTATGTCAAGAGAAAAACGTTGGA CCACCGTTTTCACTGTCTGTAGAAGCATCGTTAATCACCTCGTATATATATAACGACCCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCCCTTCACTTTCTCTCTCTCTCTCTAGCACTGGTTTATATTGAGACACAGAGAGAAAGATCTGACCCA TTGTGCTCTCTATTCTCTCTCTCTCTCTCTCTCTTTTCAGGGATTTAACCTATTTTGGGCATTGGATTTTGGTGGCTTTT TGTCAAAAGGGGTCTTCTTCTTTTGTGGCAATCTCTCTCTCTTGCGGGTAATTATCCATTTGTGCTACACTGCTGTTTTT CTCTCTTCCCCTTTTTATTGCTTCTGCATTTCTCATTTCTCATTTTCTGAAGCTTCTCAGTTCAAAGTTTTGTTCTTTTT TGAATTATCAATCGTGGGGTGCCATTCAAGGTATTCAGATCATTCCCTTTTGATTTTGTTATCCTCTTGTATGTGTCTCA TTTTTCTCCAATTTTGGTTTGCATGCTTGGTTTGTTCATTGAACAAGGTGTGATCTTTGTTTACAATTCTGTTTTTCATG GGGGGTTTTGTTTTGCATGTTTGAGTCCATTGGTCCCTTTGCCCATTTGACATGCACGGTTGAAATTGCCTGATTGTGAT CAAATTGATATAGTTCATGTGTTTATTGACGAATAGAAGTGTTCATCATTAAGCCTTGGCCTGCATGGGTGTGTTTTCTT CCCCTAAATGATAATCATGTTTAACCATTCTAAAAAAATCTTTTTGATTCATGGGTTGGCATTTGTTTACCTGCTAGTTA GGCCTGTTTAATTATACATTCTCTTGAATGTTCCTTATATTCATATGAAGTATTTGGGAGTAGGTGTCGTTTAATTATGC ATTCATATGAAGTATCATGGGTTGACATTTGCTTACCTGCTTGTTAGGCCTGTGGATCAAACTGGTTAATTATACATGAT CTTGAATGTTCCTTTTGTTTAATTTTGCATTCATATGAAGTATTATGGGTTGGCATTTGTTTACCTGCTTGTTAGGCCTG TGGATCAAACTGTTTAATTATACATGCTCTTGAATGCTCCTTATGTTTATATGAATTGTTATGCTTTGGCATTAGGTTTT GGGGGATTTTTGAGGCTGTCCTGTAGCTGGAGCAATGACTGTTGAGGTTGTGGGATTTGAGATGGTTCCAGGACCAGTGG AAAACATTGCTGAAGGAGAGAAATCTGTTTCTCATGAAACTGAAAATGGGAAATTGGAACAGGAGCCGGGAGCTGCAGAG CCCGTAAAATCTGGTTCAGATGGAAATGAAGCTGCTAAGGCCGAAGTTGATGGTGTTCCAGATTCCAGTGGCCCGAAAGA TGCAACTGAAGAGTGGCCTGCACCTCAGCAGATACATTCTTTTTATTTTGTCAGGTTCCGGCCTTATGATGATCCCGACA TTAAGTCCAAAGTTGATAAGCTTGATAAGGAGATTTACCTGACAAATCAAGCACGGTTTCAGATCACTGAAGCTCTAAAG GCGAAGCGGGTGAGTTGATAATACTTTGGTCATGGTTGTTCCATAAAATTTGTGTTGTTCTTGGTGGAGTTGAAAATGCG AAGACAATGGAAGGAGGGAATTAAATATTCCTGTTCTCCTCGTCTTTATTTTCAACTTCGTCTGTTCAGTTTTGTCCTTA GTGTTTTAATTTGTTCTCTGTAGTCCCGGAATTTTCTATATAGAATAAATGCTGTCCTTGTGATGAACCTGCATTTGGAT GATTCAGTTTAACAGTAACTTGCGTCGGAATTTCTTCTAAGACTACCTCATTAATACCAGTTGACGTGTCACTATTGGAC GAAATAATTTGGATGGATGATCACCATAAGGACAACAAGGAATGTAATTGCTAAATTTCTTATTGACTAAAACAGTGGAA AAAAATTAATAACTTAGTAAGCACAAAAAACAAATATAAGGACCAAAAGCTTGTTTAGCCCTTTACCTTTCTTTTTTGTC AGAGCACCAATTCTCCTGACAGTTAGTGTATAATTTTTCTGTGACTCACTTATTTGAGATATAAATACATTGTTATTTTT TATGTATTTTTCTTTTAAGTTGAACATAGCAAAAATGGTAGCCTCTAATTGTTAGGATACAGTACCCTCATTGGAAAAGA TGATGATGGAATCTCCTTTATTACATTACCACATATCTTATCTGCTTACACCTTTTTAGTAAAAATGGAAAGACCAAGTT AATGATATAATTTGTAGACTTCATGATGATGTGTGGCGACAACATATTTGTTGCAGCAGCTGCCTCAATCCACAATGCGA GACTGCAACCGCGGTGCATCAATAACTCCAATTTAAAGCTTTTTTTTTAGAATAATTTGGGATTACTAGCTTGATTGCAT CTAATATTATGCCATATTTGGTTTTTACGCAGTCAGAGCGAGCAGAATTGATTTCTCAGATTAAGTCTCTCAGAGATGAC AATAGGCAATTTCAGAGTATTGTGGATGAAAAAATAAAAGAGATTGAACCTCTGCAGCAAGCATTGGGCAAGCTGCGTAA TGCGAACAGTTCAGGCCAGGGTGGACTATGCTCATCTGAGAAGGAACTTAATGACACTGTAAGTTTATGAGTCCAAGTTA TTTTTTATTGCAGACTTTGTTATTTTTTCTGCATCATAATTAATCCTAACATCTATTCTTGATTCACTCGCTATTCCAAT GTGTACTTTAATTGATGCAGATATATAGCTTGCAATACCGCATACAGCATGAGAGCATTCCATTGACTGAGGAAAAACAA ATCCTTCGTGAAATCAAACAGCTTGAGGGGACAAGGGATAAGGTTATTGCTAATGCTTCCTTGAGGGCCAAAGTGCAAGA CTCTGTTGGGCCGAGAGAAGACATTCATGACCAGGTTAAGGTGAGATAGTTTTATTTTTATTTTTCCTATGGAACTCTTT CTTTTGGTTAAGGATTTATAATTATGTACTGTTTAAAATGTTCTTTAACAATTATTTTCCATTGCAGCTCATAGGTGGAG ATTTGGATGGTGTGAAAAAAGAGAGGCAAGTCATCCGGTCCAAAATCAAGCAGCTCGATGATGCGCTGAAAGTCATAGAC AGGGATCTCCAGTCTTTACAGGAAGAACTGGCAGCTGTAACTCAGAAGAGGGAAAAAGCTTTTGGGAGCATTCAGCAGCT AAGAAAACAACGTGATGAGGGAGTATGTCTTGTTTTTTTGTGACACACACACCATAGTTTTATGTTTCTCATTCTTGGCA CGTGGTACCGAGCTATACTCTTAATTCTGATCCAAATTTATGGACATGCTATCAGAAAGTTTTACTCATTTGTTGTTTCA CAAGTCAGTGCTGAATAATTTCTGAATTTGAATTGATCTTCATTTATTCAGAACACTCATTTCTTCCAAAGTCGTACAAT TTTGAGCAAAGCACGAGAGGTTGCTGCAAAGAAAGATATTGATGCTCTCGGGGAACTGTCACAGACAGAGGTTTGTCTAC AGGCCTCACATTGCATTGTACATTAGTCATATTACTACTTTTTTTGCTGTTTTTCTTACCTAAGTTGTGTAGTAGTTGCA ATTTTATTTATATTTTTTGTGGGTTCTAGGTTGAGAAATTTATGTCACTCTGGAACAGCGACAAATCCTTTAGGAATGAC TATGAGAAAAGAATTTTGCCATCGCTGGATATGCGGCAGTTGAGTAGGGATGGTCGAATGAGGAATCCCGATGAAAGGCC ATTGCTGGAAGAACCAAAACCTGCTGCAGAAACTGAAAAGTTACCGAAAAGCAGTGTGAAACAGCAGCCAAAGGAGGAGC CTAAAGCGCCTCCCCAAGAAACTCTGCCTGCCCCGAAGGTTCAGAAAGAAACCAAAAACAAAGGAAAAAATTTGAAACCC AGTCTGGCTATCAATGATGTAGAAGATGCTGATGAATATGAATATGAAAACCCGCACAAGGACGCTCCTGTCAAAGAGCC GGAAATTGATCCGGCGAAGTTGAAACAGATGAAAAGAGAAGAGGAACTAGCAAAAGCAAAGCTGGCCTTGGAAAGGAAGA AGAAGCTTGCAGAGAAAGCAGCAGCCAAAGCAGCAGCTAAAGCACAGAAGGAGGCTGAGAAGAAGCTTAAGGTGATTGTT GGTGCAATTCTCTTTTCTGAACATGCTTTGTGAATGCAAGATTAAGTACTGAAATATGAATTCGGGTCTTGATTTGTGTT AGGAACGTGAGAAGAAAGCAAAGAAATCGGGTCCCGGCTCTGCAGCTGCTCCGAACCCTGAGGAACCGGCAAATGAAGCG GTTGAGGTGGCAGAACAGGAGAAAGCTGATGATAAAGTCCAACCCTCAGCTCCGGTGAAGGAGAAGGCCGTGAAGGAGCA CGTTGTTAGATCGAGGAGCCGAGCAAAAGCCCCTGAGGCCATTCCGAAAGCAATTCTCAAGAGGAGAAGGTCTAACGATT ACTGGATATGGGTGGCATCTGGAGCCTTCTTCGCTGTGTTCATGTTGATGCTGGGATACATCCTTCTTTTCTGAACAGCT TAGATGTAGAAGGAGCTGAAAATCCATTTTCAGTTTTTTCGGGTGTCTAGATTTGCTGCCAGTGTCAGTAAGTTTTCTTT TCTTCTGTTCTACACAACCTCTTGGAGGGAATGTGGATCAAACACACCATGTTATGGTTGAGCTCCTTTCTGTGAAGCTT CATACATGTAGTATGACTATTTAATTTTACATTTTGTTTTACCAGAAACATAGATTTTGGTTTTCATTTTTCTTTTTTTA TAGTTAATTGGTCAAAGGAATGGTACTGTGAGATACTGAAACTTAATGTTGATATCTCTTTATGTTGGTTATAGACTTGA TAATATATACAAAAAAAAAAC
CDS sequence (LotjaGi3g1v0047200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGTTGAGGTTGTGGGATTTGAGATGGTTCCAGGACCAGTGGAAAACATTGCTGAAGGAGAGAAATCTGTTTCTCA TGAAACTGAAAATGGGAAATTGGAACAGGAGCCGGGAGCTGCAGAGCCCGTAAAATCTGGTTCAGATGGAAATGAAGCTG CTAAGGCCGAAGTTGATGGTGTTCCAGATTCCAGTGGCCCGAAAGATGCAACTGAAGAGTGGCCTGCACCTCAGCAGATA CATTCTTTTTATTTTGTCAGGTTCCGGCCTTATGATGATCCCGACATTAAGTCCAAAGTTGATAAGCTTGATAAGGAGAT TTACCTGACAAATCAAGCACGGTTTCAGATCACTGAAGCTCTAAAGGCGAAGCGGTCAGAGCGAGCAGAATTGATTTCTC AGATTAAGTCTCTCAGAGATGACAATAGGCAATTTCAGAGTATTGTGGATGAAAAAATAAAAGAGATTGAACCTCTGCAG CAAGCATTGGGCAAGCTGCGTAATGCGAACAGTTCAGGCCAGGGTGGACTATGCTCATCTGAGAAGGAACTTAATGACAC TATATATAGCTTGCAATACCGCATACAGCATGAGAGCATTCCATTGACTGAGGAAAAACAAATCCTTCGTGAAATCAAAC AGCTTGAGGGGACAAGGGATAAGGTTATTGCTAATGCTTCCTTGAGGGCCAAAGTGCAAGACTCTGTTGGGCCGAGAGAA GACATTCATGACCAGGTTAAGCTCATAGGTGGAGATTTGGATGGTGTGAAAAAAGAGAGGCAAGTCATCCGGTCCAAAAT CAAGCAGCTCGATGATGCGCTGAAAGTCATAGACAGGGATCTCCAGTCTTTACAGGAAGAACTGGCAGCTGTAACTCAGA AGAGGGAAAAAGCTTTTGGGAGCATTCAGCAGCTAAGAAAACAACGTGATGAGGGAAACACTCATTTCTTCCAAAGTCGT ACAATTTTGAGCAAAGCACGAGAGGTTGCTGCAAAGAAAGATATTGATGCTCTCGGGGAACTGTCACAGACAGAGGTTGA GAAATTTATGTCACTCTGGAACAGCGACAAATCCTTTAGGAATGACTATGAGAAAAGAATTTTGCCATCGCTGGATATGC GGCAGTTGAGTAGGGATGGTCGAATGAGGAATCCCGATGAAAGGCCATTGCTGGAAGAACCAAAACCTGCTGCAGAAACT GAAAAGTTACCGAAAAGCAGTGTGAAACAGCAGCCAAAGGAGGAGCCTAAAGCGCCTCCCCAAGAAACTCTGCCTGCCCC GAAGGTTCAGAAAGAAACCAAAAACAAAGGAAAAAATTTGAAACCCAGTCTGGCTATCAATGATGTAGAAGATGCTGATG AATATGAATATGAAAACCCGCACAAGGACGCTCCTGTCAAAGAGCCGGAAATTGATCCGGCGAAGTTGAAACAGATGAAA AGAGAAGAGGAACTAGCAAAAGCAAAGCTGGCCTTGGAAAGGAAGAAGAAGCTTGCAGAGAAAGCAGCAGCCAAAGCAGC AGCTAAAGCACAGAAGGAGGCTGAGAAGAAGCTTAAGGAACGTGAGAAGAAAGCAAAGAAATCGGGTCCCGGCTCTGCAG CTGCTCCGAACCCTGAGGAACCGGCAAATGAAGCGGTTGAGGTGGCAGAACAGGAGAAAGCTGATGATAAAGTCCAACCC TCAGCTCCGGTGAAGGAGAAGGCCGTGAAGGAGCACGTTGTTAGATCGAGGAGCCGAGCAAAAGCCCCTGAGGCCATTCC GAAAGCAATTCTCAAGAGGAGAAGGTCTAACGATTACTGGATATGGGTGGCATCTGGAGCCTTCTTCGCTGTGTTCATGT TGATGCTGGGATACATCCTTCTTTTCTGA
Protein sequence (LotjaGi3g1v0047200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTVEVVGFEMVPGPVENIAEGEKSVSHETENGKLEQEPGAAEPVKSGSDGNEAAKAEVDGVPDSSGPKDATEEWPAPQQI HSFYFVRFRPYDDPDIKSKVDKLDKEIYLTNQARFQITEALKAKRSERAELISQIKSLRDDNRQFQSIVDEKIKEIEPLQ QALGKLRNANSSGQGGLCSSEKELNDTIYSLQYRIQHESIPLTEEKQILREIKQLEGTRDKVIANASLRAKVQDSVGPRE DIHDQVKLIGGDLDGVKKERQVIRSKIKQLDDALKVIDRDLQSLQEELAAVTQKREKAFGSIQQLRKQRDEGNTHFFQSR TILSKAREVAAKKDIDALGELSQTEVEKFMSLWNSDKSFRNDYEKRILPSLDMRQLSRDGRMRNPDERPLLEEPKPAAET EKLPKSSVKQQPKEEPKAPPQETLPAPKVQKETKNKGKNLKPSLAINDVEDADEYEYENPHKDAPVKEPEIDPAKLKQMK REEELAKAKLALERKKKLAEKAAAKAAAKAQKEAEKKLKEREKKAKKSGPGSAAAPNPEEPANEAVEVAEQEKADDKVQP SAPVKEKAVKEHVVRSRSRAKAPEAIPKAILKRRRSNDYWIWVASGAFFAVFMLMLGYILLF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 598 | 598 | - | – | |
| MobiDBLite | 1 | 76 | 76 | - | – | |
| PANTHER | 6 | 618 | 613 | 2.5E-252 | – | |
| PANTHER | 6 | 618 | 613 | 2.5E-252 | ||
| MobiDBLite | 21 | 35 | 15 | - | – | |
| Coils | 121 | 141 | 21 | - | – | |
| SUPERFAMILY | 240 | 311 | 72 | 1.21E-5 | – | |
| Coils | 253 | 301 | 49 | - | – | |
| MobiDBLite | 374 | 480 | 107 | - | – | |
| MobiDBLite | 374 | 416 | 43 | - | – | |
| MobiDBLite | 455 | 480 | 26 | - | – | |
| Coils | 476 | 527 | 52 | - | – | |
| MobiDBLite | 496 | 528 | 33 | - | – | |
| MobiDBLite | 496 | 580 | 85 | - | – | |
| MobiDBLite | 546 | 580 | 35 | - | – | |
| TMHMM | 599 | 621 | 23 | - | – | |
| Phobius | 599 | 621 | 23 | - | – | |
| Phobius | 622 | 622 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | ||
| Cellular component | Plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. | ||
| Biological process | Regulation of proton transport | Any process that modulates the frequency, rate or extent of proton transport into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi3g1v0047200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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