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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0047200 |
| Transcript ID | LotjaGi3g1v0047200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Proton pump interactor, putative; TAIR: AT4G27500.1 proton pump interactor 1; Swiss-Prot: sp|O23144|PPI1_ARATH Proton pump-interactor 1; TrEMBL-Plants: tr|A0A151S5G2|A0A151S5G2_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0047200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:5024787..5029969) extracted from Lotus japonicus Gifu genome v1.2.
ATTTCCCTAAACACAATTAAAAAATAAAGAAATAGAGGTAAACACACTACTTGCTTTTCCTAAGACAAAGAAAACATTAA AAGAACAACCTTTGCAAATCTATGTCAAGAGAAAAACGTTGGACCACCGTTTTCACTGTCTGTAGAAGCATCGTTAATCA CCTCGTATATATATAACGACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTCACTTTCTCTCTCTCTCTCT AGCACTGGTTTATATTGAGACACAGAGAGAAAGATCTGACCCATTGTGCTCTCTATTCTCTCTCTCTCTCTCTCTCTTTT CAGGGATTTAACCTATTTTGGGCATTGGATTTTGGTGGCTTTTTGTCAAAAGGGGTCTTCTTCTTTTGTGGCAATCTCTC TCTCTTGCGGGTAATTATCCATTTGTGCTACACTGCTGTTTTTCTCTCTTCCCCTTTTTATTGCTTCTGCATTTCTCATT TCTCATTTTCTGAAGCTTCTCAGTTCAAAGTTTTGTTCTTTTTTGAATTATCAATCGTGGGGTGCCATTCAAGGTATTCA GATCATTCCCTTTTGATTTTGTTATCCTCTTGTATGTGTCTCATTTTTCTCCAATTTTGGTTTGCATGCTTGGTTTGTTC ATTGAACAAGGTGTGATCTTTGTTTACAATTCTGTTTTTCATGGGGGGTTTTGTTTTGCATGTTTGAGTCCATTGGTCCC TTTGCCCATTTGACATGCACGGTTGAAATTGCCTGATTGTGATCAAATTGATATAGTTCATGTGTTTATTGACGAATAGA AGTGTTCATCATTAAGCCTTGGCCTGCATGGGTGTGTTTTCTTCCCCTAAATGATAATCATGTTTAACCATTCTAAAAAA ATCTTTTTGATTCATGGGTTGGCATTTGTTTACCTGCTAGTTAGGCCTGTTTAATTATACATTCTCTTGAATGTTCCTTA TATTCATATGAAGTATTTGGGAGTAGGTGTCGTTTAATTATGCATTCATATGAAGTATCATGGGTTGACATTTGCTTACC TGCTTGTTAGGCCTGTGGATCAAACTGGTTAATTATACATGATCTTGAATGTTCCTTTTGTTTAATTTTGCATTCATATG AAGTATTATGGGTTGGCATTTGTTTACCTGCTTGTTAGGCCTGTGGATCAAACTGTTTAATTATACATGCTCTTGAATGC TCCTTATGTTTATATGAATTGTTATGCTTTGGCATTAGGTTTTGGGGGATTTTTGAGGCTGTCCTGTAGCTGGAGCAATG ACTGTTGAGGTTGTGGGATTTGAGATGGTTCCAGGACCAGTGGAAAACATTGCTGAAGGAGAGAAATCTGTTTCTCATGA AACTGAAAATGGGAAATTGGAACAGGAGCCGGGAGCTGCAGAGCCCGTAAAATCTGGTTCAGATGGAAATGAAGCTGCTA AGGCCGAAGTTGATGGTGTTCCAGATTCCAGTGGCCCGAAAGATGCAACTGAAGAGTGGCCTGCACCTCAGCAGATACAT TCTTTTTATTTTGTCAGGTTCCGGCCTTATGATGATCCCGACATTAAGTCCAAAGTTGATAAGCTTGATAAGGAGATTTA CCTGACAAATCAAGCACGGTTTCAGATCACTGAAGCTCTAAAGGCGAAGCGGGTGAGTTGATAATACTTTGGTCATGGTT GTTCCATAAAATTTGTGTTGTTCTTGGTGGAGTTGAAAATGCGAAGACAATGGAAGGAGGGAATTAAATATTCCTGTTCT CCTCGTCTTTATTTTCAACTTCGTCTGTTCAGTTTTGTCCTTAGTGTTTTAATTTGTTCTCTGTAGTCCCGGAATTTTCT ATATAGAATAAATGCTGTCCTTGTGATGAACCTGCATTTGGATGATTCAGTTTAACAGTAACTTGCGTCGGAATTTCTTC TAAGACTACCTCATTAATACCAGTTGACGTGTCACTATTGGACGAAATAATTTGGATGGATGATCACCATAAGGACAACA AGGAATGTAATTGCTAAATTTCTTATTGACTAAAACAGTGGAAAAAAATTAATAACTTAGTAAGCACAAAAAACAAATAT AAGGACCAAAAGCTTGTTTAGCCCTTTACCTTTCTTTTTTGTCAGAGCACCAATTCTCCTGACAGTTAGTGTATAATTTT TCTGTGACTCACTTATTTGAGATATAAATACATTGTTATTTTTTATGTATTTTTCTTTTAAGTTGAACATAGCAAAAATG GTAGCCTCTAATTGTTAGGATACAGTACCCTCATTGGAAAAGATGATGATGGAATCTCCTTTATTACATTACCACATATC TTATCTGCTTACACCTTTTTAGTAAAAATGGAAAGACCAAGTTAATGATATAATTTGTAGACTTCATGATGATGTGTGGC GACAACATATTTGTTGCAGCAGCTGCCTCAATCCACAATGCGAGACTGCAACCGCGGTGCATCAATAACTCCAATTTAAA GCTTTTTTTTTAGAATAATTTGGGATTACTAGCTTGATTGCATCTAATATTATGCCATATTTGGTTTTTACGCAGTCAGA GCGAGCAGAATTGATTTCTCAGATTAAGTCTCTCAGAGATGACAATAGGCAATTTCAGAGTATTGTGGATGAAAAAATAA AAGAGATTGAACCTCTGCAGCAAGCATTGGGCAAGCTGCGTAATGCGAACAGTTCAGGCCAGGGTGGACTATGCTCATCT GAGAAGGAACTTAATGACACTGTAAGTTTATGAGTCCAAGTTATTTTTTATTGCAGACTTTGTTATTTTTTCTGCATCAT AATTAATCCTAACATCTATTCTTGATTCACTCGCTATTCCAATGTGTACTTTAATTGATGCAGATATATAGCTTGCAATA CCGCATACAGCATGAGAGCATTCCATTGACTGAGGAAAAACAAATCCTTCGTGAAATCAAACAGCTTGAGGGGACAAGGG ATAAGGTTATTGCTAATGCTTCCTTGAGGGCCAAAGTGCAAGACTCTGTTGGGCCGAGAGAAGACATTCATGACCAGGTT AAGGTGAGATAGTTTTATTTTTATTTTTCCTATGGAACTCTTTCTTTTGGTTAAGGATTTATAATTATGTACTGTTTAAA ATGTTCTTTAACAATTATTTTCCATTGCAGCTCATAGGTGGAGATTTGGATGGTGTGAAAAAAGAGAGGCAAGTCATCCG GTCCAAAATCAAGCAGCTCGATGATGCGCTGAAAGTCATAGACAGGGATCTCCAGTCTTTACAGGAAGAACTGGCAGCTG TAACTCAGAAGAGGGAAAAAGCTTTTGGGAGCATTCAGCAGCTAAGAAAACAACGTGATGAGGGAGTATGTCTTGTTTTT TTGTGACACACACACCATAGTTTTATGTTTCTCATTCTTGGCACGTGGTACCGAGCTATACTCTTAATTCTGATCCAAAT TTATGGACATGCTATCAGAAAGTTTTACTCATTTGTTGTTTCACAAGTCAGTGCTGAATAATTTCTGAATTTGAATTGAT CTTCATTTATTCAGAACACTCATTTCTTCCAAAGTCGTACAATTTTGAGCAAAGCACGAGAGGTTGCTGCAAAGAAAGAT ATTGATGCTCTCGGGGAACTGTCACAGACAGAGGTTTGTCTACAGGCCTCACATTGCATTGTACATTAGTCATATTACTA CTTTTTTTGCTGTTTTTCTTACCTAAGTTGTGTAGTAGTTGCAATTTTATTTATATTTTTTGTGGGTTCTAGGTTGAGAA ATTTATGTCACTCTGGAACAGCGACAAATCCTTTAGGAATGACTATGAGAAAAGAATTTTGCCATCGCTGGATATGCGGC AGTTGAGTAGGGATGGTCGAATGAGGAATCCCGATGAAAGGCCATTGCTGGAAGAACCAAAACCTGCTGCAGAAACTGAA AAGTTACCGAAAAGCAGTGTGAAACAGCAGCCAAAGGAGGAGCCTAAAGCGCCTCCCCAAGAAACTCTGCCTGCCCCGAA GGTTCAGAAAGAAACCAAAAACAAAGGAAAAAATTTGAAACCCAGTCTGGCTATCAATGATGTAGAAGATGCTGATGAAT ATGAATATGAAAACCCGCACAAGGACGCTCCTGTCAAAGAGCCGGAAATTGATCCGGCGAAGTTGAAACAGATGAAAAGA GAAGAGGAACTAGCAAAAGCAAAGCTGGCCTTGGAAAGGAAGAAGAAGCTTGCAGAGAAAGCAGCAGCCAAAGCAGCAGC TAAAGCACAGAAGGAGGCTGAGAAGAAGCTTAAGGTGATTGTTGGTGCAATTCTCTTTTCTGAACATGCTTTGTGAATGC AAGATTAAGTACTGAAATATGAATTCGGGTCTTGATTTGTGTTAGGAACGTGAGAAGAAAGCAAAGAAATCGGGTCCCGG CTCTGCAGCTGCTCCGAACCCTGAGGAACCGGCAAATGAAGCGGTTGAGGTGGCAGAACAGGAGAAAGCTGATGATAAAG TCCAACCCTCAGCTCCGGTGAAGGAGAAGGCCGTGAAGGAGCACGTTGTTAGATCGAGGAGCCGAGCAAAAGCCCCTGAG GCCATTCCGAAAGCAATTCTCAAGAGGAGAAGGTCTAACGATTACTGGATATGGGTGGCATCTGGAGCCTTCTTCGCTGT GTTCATGTTGATGCTGGGATACATCCTTCTTTTCTGAACAGCTTAGATGTAGAAGGAGCTGAAAATCCATTTTCAGTTTT TTCGGGTGTCTAGATTTGCTGCCAGTGTCAGTAAGTTTTCTTTTCTTCTGTTCTACACAACCTCTTGGAGGGAATGTGGA TCAAACACACCATGTTATGGTTGAGCTCCTTTCTGTGAAGCTTCATACATGTAGTATGACTATTTAATTTTACATTTTGT TTTACCAGAAACATAGATTTTGGTTTTCATTTTTCTTTTTTTATAGTTAATTGGTCAAAGGAATGGTACTGTGAGATACT GAAACTTAATGTTGATATCTCTTTATGTTGGTTATAGACTTGATAATATATACAAAAAAAAAACCTTTTGTAGAATTATG GCTTGAAAGTTATACTCTCGGGTATTGTGTGTATGTTCATTACCCCAAGGTTGGTGTGTTCGTGTGAATGTTCATCCCCA GAGTGATGTGACCCTCTTTTTGAGATTCGTATAGGATTAATATGACCACTATTTGAATTTCAA
CDS sequence (LotjaGi3g1v0047200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTGTTGAGGTTGTGGGATTTGAGATGGTTCCAGGACCAGTGGAAAACATTGCTGAAGGAGAGAAATCTGTTTCTCA TGAAACTGAAAATGGGAAATTGGAACAGGAGCCGGGAGCTGCAGAGCCCGTAAAATCTGGTTCAGATGGAAATGAAGCTG CTAAGGCCGAAGTTGATGGTGTTCCAGATTCCAGTGGCCCGAAAGATGCAACTGAAGAGTGGCCTGCACCTCAGCAGATA CATTCTTTTTATTTTGTCAGGTTCCGGCCTTATGATGATCCCGACATTAAGTCCAAAGTTGATAAGCTTGATAAGGAGAT TTACCTGACAAATCAAGCACGGTTTCAGATCACTGAAGCTCTAAAGGCGAAGCGGTCAGAGCGAGCAGAATTGATTTCTC AGATTAAGTCTCTCAGAGATGACAATAGGCAATTTCAGAGTATTGTGGATGAAAAAATAAAAGAGATTGAACCTCTGCAG CAAGCATTGGGCAAGCTGCGTAATGCGAACAGTTCAGGCCAGGGTGGACTATGCTCATCTGAGAAGGAACTTAATGACAC TATATATAGCTTGCAATACCGCATACAGCATGAGAGCATTCCATTGACTGAGGAAAAACAAATCCTTCGTGAAATCAAAC AGCTTGAGGGGACAAGGGATAAGGTTATTGCTAATGCTTCCTTGAGGGCCAAAGTGCAAGACTCTGTTGGGCCGAGAGAA GACATTCATGACCAGGTTAAGCTCATAGGTGGAGATTTGGATGGTGTGAAAAAAGAGAGGCAAGTCATCCGGTCCAAAAT CAAGCAGCTCGATGATGCGCTGAAAGTCATAGACAGGGATCTCCAGTCTTTACAGGAAGAACTGGCAGCTGTAACTCAGA AGAGGGAAAAAGCTTTTGGGAGCATTCAGCAGCTAAGAAAACAACGTGATGAGGGAAACACTCATTTCTTCCAAAGTCGT ACAATTTTGAGCAAAGCACGAGAGGTTGCTGCAAAGAAAGATATTGATGCTCTCGGGGAACTGTCACAGACAGAGGTTGA GAAATTTATGTCACTCTGGAACAGCGACAAATCCTTTAGGAATGACTATGAGAAAAGAATTTTGCCATCGCTGGATATGC GGCAGTTGAGTAGGGATGGTCGAATGAGGAATCCCGATGAAAGGCCATTGCTGGAAGAACCAAAACCTGCTGCAGAAACT GAAAAGTTACCGAAAAGCAGTGTGAAACAGCAGCCAAAGGAGGAGCCTAAAGCGCCTCCCCAAGAAACTCTGCCTGCCCC GAAGGTTCAGAAAGAAACCAAAAACAAAGGAAAAAATTTGAAACCCAGTCTGGCTATCAATGATGTAGAAGATGCTGATG AATATGAATATGAAAACCCGCACAAGGACGCTCCTGTCAAAGAGCCGGAAATTGATCCGGCGAAGTTGAAACAGATGAAA AGAGAAGAGGAACTAGCAAAAGCAAAGCTGGCCTTGGAAAGGAAGAAGAAGCTTGCAGAGAAAGCAGCAGCCAAAGCAGC AGCTAAAGCACAGAAGGAGGCTGAGAAGAAGCTTAAGGAACGTGAGAAGAAAGCAAAGAAATCGGGTCCCGGCTCTGCAG CTGCTCCGAACCCTGAGGAACCGGCAAATGAAGCGGTTGAGGTGGCAGAACAGGAGAAAGCTGATGATAAAGTCCAACCC TCAGCTCCGGTGAAGGAGAAGGCCGTGAAGGAGCACGTTGTTAGATCGAGGAGCCGAGCAAAAGCCCCTGAGGCCATTCC GAAAGCAATTCTCAAGAGGAGAAGGTCTAACGATTACTGGATATGGGTGGCATCTGGAGCCTTCTTCGCTGTGTTCATGT TGATGCTGGGATACATCCTTCTTTTCTGA
Protein sequence (LotjaGi3g1v0047200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTVEVVGFEMVPGPVENIAEGEKSVSHETENGKLEQEPGAAEPVKSGSDGNEAAKAEVDGVPDSSGPKDATEEWPAPQQI HSFYFVRFRPYDDPDIKSKVDKLDKEIYLTNQARFQITEALKAKRSERAELISQIKSLRDDNRQFQSIVDEKIKEIEPLQ QALGKLRNANSSGQGGLCSSEKELNDTIYSLQYRIQHESIPLTEEKQILREIKQLEGTRDKVIANASLRAKVQDSVGPRE DIHDQVKLIGGDLDGVKKERQVIRSKIKQLDDALKVIDRDLQSLQEELAAVTQKREKAFGSIQQLRKQRDEGNTHFFQSR TILSKAREVAAKKDIDALGELSQTEVEKFMSLWNSDKSFRNDYEKRILPSLDMRQLSRDGRMRNPDERPLLEEPKPAAET EKLPKSSVKQQPKEEPKAPPQETLPAPKVQKETKNKGKNLKPSLAINDVEDADEYEYENPHKDAPVKEPEIDPAKLKQMK REEELAKAKLALERKKKLAEKAAAKAAAKAQKEAEKKLKEREKKAKKSGPGSAAAPNPEEPANEAVEVAEQEKADDKVQP SAPVKEKAVKEHVVRSRSRAKAPEAIPKAILKRRRSNDYWIWVASGAFFAVFMLMLGYILLF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 598 | 598 | - | – | |
| MobiDBLite | 1 | 76 | 76 | - | – | |
| PANTHER | 6 | 618 | 613 | 2.5E-252 | – | |
| PANTHER | 6 | 618 | 613 | 2.5E-252 | ||
| MobiDBLite | 21 | 35 | 15 | - | – | |
| Coils | 121 | 141 | 21 | - | – | |
| SUPERFAMILY | 240 | 311 | 72 | 1.21E-5 | – | |
| Coils | 253 | 301 | 49 | - | – | |
| MobiDBLite | 374 | 480 | 107 | - | – | |
| MobiDBLite | 374 | 416 | 43 | - | – | |
| MobiDBLite | 455 | 480 | 26 | - | – | |
| Coils | 476 | 527 | 52 | - | – | |
| MobiDBLite | 496 | 528 | 33 | - | – | |
| MobiDBLite | 496 | 580 | 85 | - | – | |
| MobiDBLite | 546 | 580 | 35 | - | – | |
| TMHMM | 599 | 621 | 23 | - | – | |
| Phobius | 599 | 621 | 23 | - | – | |
| Phobius | 622 | 622 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | ||
| Cellular component | Plasma membrane | The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins. | ||
| Biological process | Regulation of proton transport | Any process that modulates the frequency, rate or extent of proton transport into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi3g1v0047200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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