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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR031056
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.007s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v2682520.1
n.a. PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1| chr1 31202248 31209766 +
2 domain predictions
4 GO terms
Lj1g3v2682530.1
n.a. PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1| chr1 31209960 31217614 +
2 domain predictions
4 GO terms
Lj1g3v2682530.2
n.a. PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1| chr1 31212558 31217614 +
2 domain predictions
4 GO terms
Lj3g3v2341090.1
n.a. PREDICTED: ATP-dependent helicase BRM-like [Cicer arietinum] gi|502157142|ref|XP_004510773.1| chr3 29454427 29460227 +
2 domain predictions
4 GO terms
Lj3g3v2341100.1
n.a. PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356560792|ref|XP_003548671.1| chr3 29460340 29466945 +
2 domain predictions
4 GO terms
LotjaGi1g1v0478100.1
n.a. ATP-dependent helicase BRM; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1N3S1|I1N3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478100 LjG1.1_chr1 98986383 98999939 +
2 domain predictions
4 GO terms
LotjaGi1g1v0478100.2
n.a. ATP-dependent helicase family protein; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1N3S1|I1N3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478100 LjG1.1_chr1 98986976 98999231 +
2 domain predictions
4 GO terms
LotjaGi3g1v0384500.1
n.a. ATP-dependent helicase BRM; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1MKV5|I1MKV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384500 LjG1.1_chr3 77908783 77921480 +
2 domain predictions
4 GO terms
LotjaGi3g1v0384500.2
n.a. ATP-dependent helicase family protein; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1MKV5|I1MKV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384500 LjG1.1_chr3 77909258 77921066 +
2 domain predictions
4 GO terms