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GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
Molecular function | DNA-dependent ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of single- or double-stranded DNA, and it drives another reaction. | ||
Biological process | Regulation of gene expression, epigenetic | Any process that modulates the frequency, rate or extent of gene expression; the process is mitotically or meiotically heritable, or is stably self-propagated in the cytoplasm of a resting cell, and does not entail a change in DNA sequence. | ||
Biological process | ATP-dependent chromatin remodeling | Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1| | 9 | ||
– | PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1| | 22 | ||
– | PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1| | 18 | ||
– | PREDICTED: ATP-dependent helicase BRM-like [Cicer arietinum] gi|502157142|ref|XP_004510773.1| | 12 | ||
– | PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356560792|ref|XP_003548671.1| | 23 | ||
– | ATP-dependent helicase BRM; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1N3S1|I1N3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478100 | 31 | ||
– | ATP-dependent helicase family protein; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1N3S1|I1N3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478100 | 30 | ||
– | ATP-dependent helicase BRM; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1MKV5|I1MKV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384500 | 31 | ||
– | ATP-dependent helicase family protein; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1MKV5|I1MKV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384500 | 31 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
mobidb-lite | MobiDBLite | 1 | 11.11 |