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GO:0043044

View this GO term in other databases

Overview

Field Value
Namespace Biological process
Short description ATP-dependent chromatin remodeling
Full defintion Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors.
Subterm of

Relationships

The relationship of GO:0043044 with other GO terms.

Relationship type GO terms
Is a
Regulates n.a.
Part of n.a.
Positively regulates n.a.
Negatively regulates n.a.

Ancestor tree

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Additional data

This table contains additional metadata associated with the GO entry's definition field.

Field Value
GOCjl
PMID
The in vivo functions of ATP-dependent chromatin-remodelling factors.Tsukiyama T
Nat Rev Mol Cell Biol. 2002 Jun; 3 (6): 422–9.PMID: 12042764

ATP-dependent chromatin-remodelling factors regulate the accessibility of DNA to nuclear factors that are involved in cellular processes that depend on protein DNA interactions. They probably accomplish this by using the energy of ATP hydrolysis to change the positions of nucleosomes on the DNA, or to change the structure of DNA within the nucleosomes. Although their mechanisms of action have been extensively studied in vitro, many questions remain about their functions in vivo.

Associated Lotus transcripts 21

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Transcript Name Description GO terms GO count
Lj0g3v0044979.2
– SNF2 super family [Bathycoccus prasinos] gi|412991118|emb|CCO15963.1|
GO terms
3
Lj0g3v0044979.3
– SNF2 super family [Bathycoccus prasinos] gi|412991118|emb|CCO15963.1|
GO terms
3
Lj0g3v0101489.1
– SNF2 super family [Bathycoccus prasinos] gi|412991118|emb|CCO15963.1|
GO terms
3
Lj1g3v2682520.1
– PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1|
GO terms
4
Lj1g3v2682530.1
– PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1|
GO terms
4
Lj1g3v2682530.2
– PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356568407|ref|XP_003552402.1|
GO terms
4
Lj3g3v2341090.1
– PREDICTED: ATP-dependent helicase BRM-like [Cicer arietinum] gi|502157142|ref|XP_004510773.1|
GO terms
4
Lj3g3v2341100.1
– PREDICTED: ATP-dependent helicase BRM-like [Glycine max] gi|356560792|ref|XP_003548671.1|
GO terms
4
Lj4g3v2371620.1
– Chromatin remodeling complex subunit [Medicago truncatula] gi|357447407|ref|XP_003593979.1|
GO terms
4
Lj4g3v2371620.2
– Chromatin remodeling complex subunit [Medicago truncatula] gi|357447407|ref|XP_003593979.1|
GO terms
2
Lj6g3v1919360.1
– Chromatin remodeling complex subunit [Medicago truncatula] gi|357447407|ref|XP_003593979.1|
GO terms
4
LotjaGi1g1v0478100.1
– ATP-dependent helicase BRM; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1N3S1|I1N3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478100
GO terms
4
LotjaGi1g1v0478100.2
– ATP-dependent helicase family protein; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1N3S1|I1N3S1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478100
GO terms
4
LotjaGi3g1v0384500.1
– ATP-dependent helicase BRM; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1MKV5|I1MKV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384500
GO terms
4
LotjaGi3g1v0384500.2
– ATP-dependent helicase family protein; TAIR: AT2G46020.2 transcription regulatory protein SNF2; Swiss-Prot: sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM; TrEMBL-Plants: tr|I1MKV5|I1MKV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0384500
GO terms
4
LotjaGi4g1v0345700.1
– DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|A0A1J7I094|A0A1J7I094_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700
GO terms
2
LotjaGi4g1v0345700.2
– DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|I1KN24|I1KN24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700
GO terms
2
LotjaGi4g1v0345700.3
– DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|A0A1J7I094|A0A1J7I094_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700
GO terms
2
LotjaGi4g1v0345700.4
– DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|A0A1J7I094|A0A1J7I094_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700
GO terms
2
LotjaGi6g1v0306600.1
– DNA/RNA helicase protein; TAIR: AT3G06400.2 chromatin-remodeling protein 11; Swiss-Prot: sp|Q8RWY3|ISW2_ARATH ISWI chromatin-remodeling complex ATPase CHR11; TrEMBL-Plants: tr|I1M1D0|I1M1D0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0306600
GO terms
2
LotjaGi6g1v0306600.2
– DNA/RNA helicase protein; TAIR: AT3G06400.2 chromatin-remodeling protein 11; Swiss-Prot: sp|Q8RWY3|ISW2_ARATH ISWI chromatin-remodeling complex ATPase CHR11; TrEMBL-Plants: tr|A0A0B2RF13|A0A0B2RF13_GLYSO Putative chromatin-remodeling complex ATPase chain; Found in the gene: LotjaGi6g1v0306600
GO terms
2

Co-occuring GO terms 1

A list of co-occurring GO terms within the L. japonicus gene space:

GO term Namespace Name Observations Saturation (%)
GO:0043044
Biological process ATP-dependent chromatin remodeling 1 4.76