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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR032319
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 10 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.597s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v0426760.1
n.a. PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9-like [Glycine max] gi|356513953|ref|XP_003525672.1| chr1 5883664 5889802 +
2 domain predictions
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Lj4g3v0817940.1
n.a. PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9-like [Glycine max] gi|356507198|ref|XP_003522357.1| chr4 12756093 12758455 -
2 domain predictions
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Lj4g3v0818950.1
n.a. PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9-like [Glycine max] gi|356513953|ref|XP_003525672.1| chr4 12759558 12761120 -
2 domain predictions
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Lj5g3v2290070.2
n.a. PREDICTED: protein CLP1 homolog [Glycine max] gi|356536520|ref|XP_003536785.1| chr5 33489239 33505972 -
2 domain predictions
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LotjaGi1g1v0185900.1
n.a. Polynucleotide 5'-hydroxyl-kinase NOL9; TAIR: AT5G11010.2 Pre-mRNA cleavage complex II protein family; Swiss-Prot: sp|Q8VYP6|NOL9_ARATH Polynucleotide 5'-hydroxyl-kinase NOL9; TrEMBL-Plants: tr|I1K1J8|I1K1J8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0185900 LjG1.1_chr1 36391905 36399323 +
2 domain predictions
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LotjaGi1g1v0185900.2
n.a. Polynucleotide 5'-hydroxyl-kinase NOL9; TAIR: AT5G11010.2 Pre-mRNA cleavage complex II protein family; Swiss-Prot: sp|Q8VYP6|NOL9_ARATH Polynucleotide 5'-hydroxyl-kinase NOL9; TrEMBL-Plants: tr|I1K1J8|I1K1J8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0185900 LjG1.1_chr1 36392184 36399323 +
2 domain predictions
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LotjaGi1g1v0185900.3
n.a. Polynucleotide 5'-hydroxyl-kinase NOL9; TAIR: AT5G11010.2 Pre-mRNA cleavage complex II protein family; Swiss-Prot: sp|Q8VYP6|NOL9_ARATH Polynucleotide 5'-hydroxyl-kinase NOL9; TrEMBL-Plants: tr|I1K1J8|I1K1J8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0185900 LjG1.1_chr1 36394531 36397919 +
2 domain predictions
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LotjaGi4g1v0101700_LC.1
n.a. Polynucleotide 5'-hydroxyl-kinase NOL9; TAIR: AT5G11010.2 Pre-mRNA cleavage complex II protein family; Swiss-Prot: sp|Q8VYP6|NOL9_ARATH Polynucleotide 5'-hydroxyl-kinase NOL9; TrEMBL-Plants: tr|I1JX12|I1JX12_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0101700_LC LjG1.1_chr4 13921750 13928637 +
2 domain predictions
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LotjaGi4g1v0101700_LC.2
n.a. Polynucleotide 5'-hydroxyl-kinase NOL9; TAIR: AT5G11010.2 Pre-mRNA cleavage complex II protein family; Swiss-Prot: sp|Q8VYP6|NOL9_ARATH Polynucleotide 5'-hydroxyl-kinase NOL9; TrEMBL-Plants: tr|I1JX12|I1JX12_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0101700_LC LjG1.1_chr4 13923076 13928179 +
2 domain predictions
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LotjaGi5g1v0360500.4
n.a. Protein CLP1 homolog; TAIR: AT3G04680.1 CLP-similar protein 3; Swiss-Prot: sp|Q9SR06|CLP1_ARATH Protein CLP1 homolog; TrEMBL-Plants: tr|A0A151RWZ1|A0A151RWZ1_CAJCA Protein CLP1 homolog; Found in the gene: LotjaGi5g1v0360500 LjG1.1_chr5 67483826 67487949 -
2 domain predictions
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