Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036264
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.449s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0155900.1
n.a. Aminoacylase; TAIR: AT1G44820.1 Peptidase M20/M25/M40 family protein; Swiss-Prot: sp|Q99JW2|ACY1_MOUSE Aminoacylase-1; TrEMBL-Plants: tr|I1LW56|I1LW56_SOYBN Aminoacylase; Found in the gene: LotjaGi1g1v0155900 LjG1.1_chr1 28053601 28070254 +
2 domain predictions
 –
LotjaGi1g1v0262400.1
n.a. IAA-amino acid hydrolase ILR1, putative; TAIR: AT1G44350.1 IAA-amino acid hydrolase ILR1-like 6; Swiss-Prot: sp|Q8VYX0|ILL6_ARATH IAA-amino acid hydrolase ILR1-like 6; TrEMBL-Plants: tr|I1KAC2|I1KAC2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0262400 LjG1.1_chr1 64235958 64243818 -
2 domain predictions
 –
LotjaGi1g1v0300800.1
n.a. IAA-amino acid hydrolase ILR1, putative; TAIR: AT5G54140.1 IAA-leucine-resistant (ILR1)-like 3; Swiss-Prot: sp|Q7XUA8|ILL5_ORYSJ IAA-amino acid hydrolase ILR1-like 5; TrEMBL-Plants: tr|I3STS5|I3STS5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0300800 LjG1.1_chr1 73381233 73388851 -
2 domain predictions
 –
LotjaGi2g1v0024600.1
n.a. Succinyl-diaminopimelate desuccinylase; TAIR: AT4G38220.1 Peptidase M20/M25/M40 family protein; Swiss-Prot: sp|Q99JW2|ACY1_MOUSE Aminoacylase-1; TrEMBL-Plants: tr|A0A0S3T0P1|A0A0S3T0P1_PHAAN Aminoacylase; Found in the gene: LotjaGi2g1v0024600 LjG1.1_chr2 8563716 8574117 +
2 domain predictions
 –
LotjaGi2g1v0414400.1
n.a. Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; TAIR: AT4G17830.1 Peptidase M20/M25/M40 family protein; Swiss-Prot: sp|Q9C5C4|ARGE_ARATH Acetylornithine deacetylase; TrEMBL-Plants: tr|I1LH18|I1LH18_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0414400 LjG1.1_chr2 91216989 91225209 -
2 domain predictions
 –
LotjaGi3g1v0022900.1
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I1M5E5|I1M5E5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0022900 LjG1.1_chr3 2511695 2516632 -
2 domain predictions
 –
LotjaGi3g1v0316900_LC.1
n.a. Aminoacylase; TAIR: AT4G38220.1 Peptidase M20/M25/M40 family protein; Swiss-Prot: sp|Q55DP8|ACY1_DICDI Aminoacylase-1; TrEMBL-Plants: tr|A0A0S3T0P1|A0A0S3T0P1_PHAAN Aminoacylase; Found in the gene: LotjaGi3g1v0316900_LC LjG1.1_chr3 67120138 67125438 +
2 domain predictions
 –
LotjaGi3g1v0428600.1
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428600 LjG1.1_chr3 83989592 83993563 +
2 domain predictions
 –
LotjaGi3g1v0428600.2
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428600 LjG1.1_chr3 83989672 83993482 +
2 domain predictions
 –
LotjaGi3g1v0428700.1
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428700 LjG1.1_chr3 83994732 84004028 +
2 domain predictions
 –
LotjaGi3g1v0428800.1
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428800 LjG1.1_chr3 84016325 84019534 +
2 domain predictions
 –
LotjaGi3g1v0429000.1
n.a. IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0429000 LjG1.1_chr3 84027712 84034612 +
2 domain predictions
 –
LotjaGi5g1v0186900.1
n.a. N-carbamyl-L-amino acid amidohydrolase; TAIR: AT5G43600.1 ureidoglycolate amidohydrolase; Swiss-Prot: sp|Q8VXY9|UAH_ARATH Ureidoglycolate hydrolase; TrEMBL-Plants: tr|G7I3Z0|G7I3Z0_MEDTR N-carbamyl-L-amino acid amidohydrolase; Found in the gene: LotjaGi5g1v0186900 LjG1.1_chr5 47437924 47443661 -
2 domain predictions
 –
LotjaGi5g1v0186900.2
n.a. N-carbamyl-L-amino acid amidohydrolase; TAIR: AT5G43600.1 ureidoglycolate amidohydrolase; Swiss-Prot: sp|Q8VXY9|UAH_ARATH Ureidoglycolate hydrolase; TrEMBL-Plants: tr|G7I3Z0|G7I3Z0_MEDTR N-carbamyl-L-amino acid amidohydrolase; Found in the gene: LotjaGi5g1v0186900 LjG1.1_chr5 47439098 47443583 -
2 domain predictions
 –
LotjaGi6g1v0244500.1
n.a. Allantoate amidohydrolase; TAIR: AT4G20070.1 allantoate amidohydrolase; Swiss-Prot: sp|O49434|AAH_ARATH Allantoate deiminase; TrEMBL-Plants: tr|I3SAX9|I3SAX9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244500 LjG1.1_chr6 55718020 55723471 +
2 domain predictions
 –
LotjaGi6g1v0244500.2
n.a. Allantoate amidohydrolase; TAIR: AT4G20070.1 allantoate amidohydrolase; Swiss-Prot: sp|O49434|AAH_ARATH Allantoate deiminase; TrEMBL-Plants: tr|I1L153|I1L153_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0244500 LjG1.1_chr6 55718026 55723298 +
2 domain predictions
 –
LotjaGi6g1v0244500.3
n.a. Allantoate amidohydrolase; TAIR: AT4G20070.1 allantoate amidohydrolase; Swiss-Prot: sp|O49434|AAH_ARATH Allantoate deiminase; TrEMBL-Plants: tr|I3SAX9|I3SAX9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244500 LjG1.1_chr6 55719002 55723024 +
2 domain predictions
 –
LotjaGi6g1v0244500.4
n.a. Allantoate amidohydrolase; TAIR: AT4G20070.1 allantoate amidohydrolase; Swiss-Prot: sp|O49434|AAH_ARATH Allantoate deiminase; TrEMBL-Plants: tr|I3SAX9|I3SAX9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244500 LjG1.1_chr6 55719959 55723024 +
2 domain predictions
 –