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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0244500 |
| Transcript ID | LotjaGi6g1v0244500.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Allantoate amidohydrolase; TAIR: AT4G20070.1 allantoate amidohydrolase; Swiss-Prot: sp|O49434|AAH_ARATH Allantoate deiminase; TrEMBL-Plants: tr|I3SAX9|I3SAX9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0244500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55719002..55723024) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGTAGCATGTTTGTATCAGCTTCTCTTTTCGCATAATCAATTTTGACAACCGGAAGCTACTCGTAGAAGCTTCTTCC TAGAGTTGATTTTGGCTTTAGAATCAATTGTAGAATGATTTTCAAACATGCACGGTCTTGTCTCTGAAAACTTGGATGCA TTTGTAACTTGCAATGATAAATTGTGTATATTGGTAATTAGAAAGAGGAGAAAATAAAACTTAAGACCCCTTTCCATGTT TTTGTTAATGGCTATGATTGTGTGGATGTGCTAAATGCAACTTGAAAGTTTAAATGATTAGGTAGTGAAACTGGAGATTT AGAAAAAAGGGGTGATTTGTTTCCGCAGATTCTAAGAGATGAGGCAGTGGCAAGACTTCATGAGCTTGGGAAGGTACCTA ACTTGAACTGAGCTATACCCTGCTAATTTTCCATTATGTTTATACTCATAGTAAAATGAAACAGATGAATTTCTGTTCTT GACTTCAATGCAACAGATCCTTTCAGGAAAATGCTTCCCTACATTCATTGGTGTCTGTACCTATCATTTTGAAATATGTT TTTCTTCACTCTTCATTGTCTGCCAGTTTTGAAGTATAGCCTTTTCAGAAATATACAACACTCTCCACTATAAATAAAAG GCTAGATACATCATCTAGGAAATGTTGCGCGTCATTTCCTATGCTATGCTGGTTATTCCCATAATTTTCCTGTTGTGTAC CCTTAATAACATGTTTGGATTAACTTATTTTTTCTCAGAATCAATTCTAGCACCAAGAGGCTACTCTCAGAAACTTCATC TTAGATTGATTTTAGCCTTAGAATCAATTATAGAAGGATTTTCATACATGCTCTAAAGTCAAAATTGTTTATCCTTAAGT TAATGTTTCTTTTGGATGAAAAACAGGTGAGCGATGCTAGTGGCTATCTGGAGAGGACATTTTTGAGTCCTGCATCCTTG AGGGCGATTCATCTTATTCAAAAATGGATGGAGGATGCTGGTTTGAGAACGTTAGCCTTCTAACTCCTTAGGCTCTTCAT GGTTTTTCTGAAAACTTGACTGATACCTATGTTCTCTTTAGTTGGGTGGACCAAATGGGAAACGTACATGGCCGAGTCGA GGGTCCGAATGCAAATGCTGAAGCTTTATTGCTTGGATCTCACATGGTGAGACATTTATATCCTCAATTTATTTTGAATG AAACTGAACATTTCCTTCACATTTCGTGGAGATTTTAGGGAGTTGAGATTAATGGTGGTTGTGGATACTTATGTTAACAG GACACTGTTGTTGATGCTGGGAAGTTTGATGGATCACTGGGAATAATCTCTGCCATTTCTGCGTTGAAGGTTATGCATGA TAATGGAAAGCTGCAAAAGTTAAGGCGCCCTGTTGAGGTTAGTCAAGTAACTGATATAGTTTACAACATTTTCTAAGGCC TTCACCTGTTTCAAAACAGACATTTGAACTTGAAAGTTCGATAAATCAATTTCTTGGGTTCCAATTAATCTGATATACTG AAATCTCTTTTCTGTTAAGTATATACATTATTATAATTTCAAAAACATGGAAGGAGGGAGGGGGGGAATTCAGCTGCAAA AATACTTTGGAGAAAGAATGAATTACCTGATGAATAATTTCTGCAACCTATTTTGGCGGAAAGTATCTAACTTAATCTTG TCTTTATTCAACTGTGTTAAATAAAAGCTCTTGTATAGCGGTAGAGGCCGGCTCCAAAAATGCTAGAGTGGTATAGCGCA TAGAGGGATGGACGGCAAGCTAAATTTTTTATAGGGTTTACAGACATATATAAATGCAAAAGAATGCTGAAAATGCACGG CATTCGTAATTAACAATAAAAGATCACAAGTGTCTTAATTATACAAGAATAATGGTGTATGCTCACTGCTCATTGATTTT TTGTCTTATGATAATGGTGTGCACTGAGAAAAGATTCTCAAAAAATGCAAAAGGAAATGTTGATTGGAACTATTCTACTG CTTTATTCCTGCCATCATATTCCAGTCCTAACATCTATCCTGCAGGTGATTGCATTTTGCGATGAAGAGGGCGTCAGATT TCAATCTACTTTCTTGGGCAGCGGTGCCATAGCTGGTATTTTGCCTGCCACAACATTGGAGATACCGGATAAAAGGTTTC TCCTAGGAACTTTCTTCTTATGGTATAGTAAAATTTCATATAATCAATATACTTATTAATAGATTTCTTTCAGGAATGCA ACAGTAAGAGAAATTCTTAAGGAGAGCTCAATAGAAACCACAGAGGAAAGTTTTTTACAGCTCAAATATGACCCAAAATC TGTTTGGGGTTATGTTGAGGTACAACAAACATTTTCATTCTTCATCCATAGTGCTGTTTTGATCAATAACTTGACCAATA TAGAACAAGTTGGTTTTCCACATTGAACAGGGTCAAAATTTTCTTGTATTTCTTAAATGCTGCAGGTCCACATTGAACAG GGTCCTGTGCTAGAACAAGTTGGTTTTCCACTTGGTGTGGTTAAAGGCATAGCTGGACAGACACGATTGAAGGTGAAAAA TAAGAATTGCTGTGGCGTGTTTCAATGCATGTAGTTTCTTGGACTAGTTTTGTTGGTTTCCTATCATTTTAAACATATTA TGTGATTTCAACAAGATATAGCAATGATAATCCAAATGGTCTGGCATACAAAGCTTTATTGTTTCGTGCATGTGGAACAC ATGATGTGAACTTGTCACCAAACTACTATCTACCTGCTAATCTTGGTCATTTGTGTGACTCTGTGTCTATTATTGGTTTA TAAATAAACAATCATGCAGGTCACAGTCAGAGGCTCCCAAGGTCATGCTGGAACTGTTCCAATGTCCATGCGTCAGGATC CTATGGTGGCCGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGTAAACATCCTGAAGAATACCTTTCTTATGATGGT CGTTGCAGTGATTCATCGGTGAAATCACTTTCGAGTTCGCTTGTTTGTACCGTTGGAGAGATATCAACATGGCCAAGTGC CAGCAATGTCATTCCAGGCCAGGCAAGCGATGAGTTTCTAAAATGACACTGCTCTAGAAATTTCCAAGTGGGCAAGCTTT TTTCTTTCTTATCATGAGGATGATGACGCAATGTATTGATTTTTCACAGGTTACATATACCATGGATATTCGAGCAATTG ATGACCTCGGGCGTGAGGCTGTTATCTATGATTTATCCAACCGAATCTATCAAATATGTGATAGGCGTTCAGTTTCCTGC ATAATTGAACACAAGGTATGTTGATGGTGGTCTTTTGGCTTTGTTTGGATACATCTATGAAAAAATGGTTCTGGTAGAGT AAAATCAATTATGGATGAAAGTATTGATGTTTAGGAATCATTTTAGAGAATTGATTTCATACCCAAAATCAATTCTGGTA GAAGCTAAGAGAGAGTAGCTTCTGCGTTGAACATAATTACACAATTTTACAATTGAATTTCACAATATTGCCCTACATGA ACCGCTTTTTCAAATATATATCCAAACATAAACCTCTTCATTTTCAACTCACTTTTACTATAATCAATTTTACCAAAATC AATTGTGACAAACGCTGATCCAAACACGCACTTTGCTGTGATCACTTCAGCATAATGCAGGTGCTGTGATTTGTGATTCC GGACTGAGTTCACAGCTCAAGTCTGCAGCTTATTCTGCACTCAAGAGGATGGAGGGTGACATTCAAGAAGAAGTACCAAC ATTAATGAGTGGTGCAGGGCATGATGCAATGGCAATGTCTCACCTAACAAAGGTTTCATTTCTCAATTTTGCTGTATGAA GAAGGTTTTGAAACTTCAATTTTCTCTGCATGATATAACAATGAATGAGGATTTGAACAGGTGGGAATGCTGTTTGTGCG GTGTCGCGGAGGCATAAGTCACTCTCCAGAAGAGCATGTGCTGGACAATGATGTTTGGGCGGCTGGTCTAGCAACCTTAT CATTTCTGGAAAACCTGCAATAA
CDS sequence (LotjaGi6g1v0244500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAACGTACATGGCCGAGTCGAGGGTCCGAATGCAAATGC TGAAGCTTTATTGCTTGGATCTCACATGGACACTGTTGTTGATGCTGGGAAGTTTGATGGATCACTGGGAATAATCTCTG CCATTTCTGCGTTGAAGGTTATGCATGATAATGGAAAGCTGCAAAAGTTAAGGCGCCCTGTTGAGGTGATTGCATTTTGC GATGAAGAGGGCGTCAGATTTCAATCTACTTTCTTGGGCAGCGGTGCCATAGCTGGTATTTTGCCTGCCACAACATTGGA GATACCGGATAAAAGGAATGCAACAGTAAGAGAAATTCTTAAGGAGAGCTCAATAGAAACCACAGAGGAAAGTTTTTTAC AGCTCAAATATGACCCAAAATCTGTTTGGGGTTATGTTGAGGTCCACATTGAACAGGGTCCTGTGCTAGAACAAGTTGGT TTTCCACTTGGTGTGGTTAAAGGCATAGCTGGACAGACACGATTGAAGGTCACAGTCAGAGGCTCCCAAGGTCATGCTGG AACTGTTCCAATGTCCATGCGTCAGGATCCTATGGTGGCCGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGTAAAC ATCCTGAAGAATACCTTTCTTATGATGGTCGTTGCAGTGATTCATCGGTGAAATCACTTTCGAGTTCGCTTGTTTGTACC GTTGGAGAGATATCAACATGGCCAAGTGCCAGCAATGTCATTCCAGGCCAGGTTACATATACCATGGATATTCGAGCAAT TGATGACCTCGGGCGTGAGGCTGTTATCTATGATTTATCCAACCGAATCTATCAAATATGTGATAGGCGTTCAGTTTCCT GCATAATTGAACACAAGCATAATGCAGGTGCTGTGATTTGTGATTCCGGACTGAGTTCACAGCTCAAGTCTGCAGCTTAT TCTGCACTCAAGAGGATGGAGGGTGACATTCAAGAAGAAGTACCAACATTAATGAGTGGTGCAGGGCATGATGCAATGGC AATGTCTCACCTAACAAAGGTGGGAATGCTGTTTGTGCGGTGTCGCGGAGGCATAAGTCACTCTCCAGAAGAGCATGTGC TGGACAATGATGTTTGGGCGGCTGGTCTAGCAACCTTATCATTTCTGGAAAACCTGCAATAA
Protein sequence (LotjaGi6g1v0244500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDAGLRTWVDQMGNVHGRVEGPNANAEALLLGSHMDTVVDAGKFDGSLGIISAISALKVMHDNGKLQKLRRPVEVIAFC DEEGVRFQSTFLGSGAIAGILPATTLEIPDKRNATVREILKESSIETTEESFLQLKYDPKSVWGYVEVHIEQGPVLEQVG FPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMVAAAEQIVLMESLCKHPEEYLSYDGRCSDSSVKSLSSSLVCT VGEISTWPSASNVIPGQVTYTMDIRAIDDLGREAVIYDLSNRIYQICDRRSVSCIIEHKHNAGAVICDSGLSSQLKSAAY SALKRMEGDIQEEVPTLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPEEHVLDNDVWAAGLATLSFLENLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 1 | 392 | 392 | 7.48E-61 | – | |
| Gene3D | 1 | 380 | 380 | 1.7E-123 | – | |
| CDD | 1 | 390 | 390 | 5.79267E-151 | – | |
| TIGRFAM | 1 | 216 | 216 | 2.5E-65 | ||
| PANTHER | 1 | 392 | 392 | 5.1E-183 | – | |
| PANTHER | 1 | 392 | 392 | 5.1E-183 | ||
| PIRSF | 1 | 393 | 393 | 7.6E-122 | ||
| ProSitePatterns | 30 | 39 | 10 | - | ||
| Pfam | 31 | 381 | 351 | 4.9E-23 | ||
| Gene3D | 171 | 303 | 133 | 1.7E-123 | – | |
| Pfam | 171 | 281 | 111 | 1.4E-5 | ||
| SUPERFAMILY | 171 | 303 | 133 | 2.09E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Metallopeptidase activity | Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2. |
Expression pattern of LotjaGi6g1v0244500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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