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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0244500 |
| Transcript ID | LotjaGi6g1v0244500.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Allantoate amidohydrolase; TAIR: AT4G20070.1 allantoate amidohydrolase; Swiss-Prot: sp|O49434|AAH_ARATH Allantoate deiminase; TrEMBL-Plants: tr|I1L153|I1L153_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0244500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:55718026..55723298) extracted from Lotus japonicus Gifu genome v1.2.
GTGAGGTGTCCCGCAATTCAGGAAAAGGCTCGTGCATGTCACGAGTCTCGTATAGTAGCTGCCGCCGCCACGACCACCAC ATGCTCATATTCTCCAATGTTCGGTCCCTTTGAGAAAGAGTGATTGTGAAGTAGTGGTAGCTAACACCACACTTTCGATT TTGCTTTTGCTTCCTCTGCTCTCTCTCTCTCTCTCTCTCTCTCCACCCAATCATCAAACCACTCATAGCCATAGCCATAG CCACACACACAACTATGAGTTCCGCCACCACTATCTTCTTCAACCATTCATGCATCTTGTTACTGTGTCTGCTGTCAACA CCTTCATGGACTTCTTCGTTTTCTGGTATAGTTTGTTGTTTTTACTTGTTTTCTTTTCTTCATAGAAAAGTGGGAAAAAA AACACTTGTTGGGTTTTGATTCTTGGATAAAGTGCAAAGATTCCCTTTGGAAGATTCAGATTCAGATTCCATTTCCATGA TATTGTTGGCACACACAGACACAGACACAGTCTCTTTTTATTTCAGATTCAGATGCAACAGAGCAACACAGCATCACCTC CCCAATGGAGTCCAGAAGGCATACTCCAGAAAACGCCACATCAGCTTGTTGTACTGTTTGTGGTGGTGTCTGTCACCTTT AATCTCTCTGAGTGTGTCTGAGGCATAATCAACTATGAAAATGAAAAGGGTCTTCTTTTTTATAGAAGTGTTCATGTGGG CCCTTGTAAAAATTTATGCTTTGACTCTTTCTCTGGGTATGCCTTCTGTGCTTGTGTTGATGTCTGAGGCTGAGACTTGA AAAAAATATTGTGTTACTGTGAGTAGATTAGGATCATAGAAAATTTGGGGGGTTTTCTCTTATTTAATTAGAGAGAGTGT TGAATGGTTCAATGGACATGTTTATGTTGGCAACAAATAACTTGACTAATAATGTAATTCTCTGATTTGGGAGTCTGAGT TCAAATCCCATTTGGAATGAGTAGCATGTTTGTATCAGCTTCTCTTTTCGCATAATCAATTTTGACAACCGGAAGCTACT CGTAGAAGCTTCTTCCTAGAGTTGATTTTGGCTTTAGAATCAATTGTAGAATGATTTTCAAACATGCACGGTCTTGTCTC TGAAAACTTGGATGCATTTGTAACTTGCAATGATAAATTGTGTATATTGGTAATTAGAAAGAGGAGAAAATAAAACTTAA GACCCCTTTCCATGTTTTTGTTAATGGCTATGATTGTGTGGATGTGCTAAATGCAACTTGAAAGTTTAAATGATTAGGTA GTGAAACTGGAGATTTAGAAAAAAGGGGTGATTTGTTTCCGCAGATTCTAAGAGATGAGGCAGTGGCAAGACTTCATGAG CTTGGGAAGGTACCTAACTTGAACTGAGCTATACCCTGCTAATTTTCCATTATGTTTATACTCATAGTAAAATGAAACAG ATGAATTTCTGTTCTTGACTTCAATGCAACAGATCCTTTCAGGAAAATGCTTCCCTACATTCATTGGTGTCTGTACCTAT CATTTTGAAATATGTTTTTCTTCACTCTTCATTGTCTGCCAGTTTTGAAGTATAGCCTTTTCAGAAATATACAACACTCT CCACTATAAATAAAAGGCTAGATACATCATCTAGGAAATGTTGCGCGTCATTTCCTATGCTATGCTGGTTATTCCCATAA TTTTCCTGTTGTGTACCCTTAATAACATGTTTGGATTAACTTATTTTTTCTCAGAATCAATTCTAGCACCAAGAGGCTAC TCTCAGAAACTTCATCTTAGATTGATTTTAGCCTTAGAATCAATTATAGAAGGATTTTCATACATGCTCTAAAGTCAAAA TTGTTTATCCTTAAGTTAATGTTTCTTTTGGATGAAAAACAGGTGAGCGATGCTAGTGGCTATCTGGAGAGGACATTTTT GAGTCCTGCATCCTTGAGGGCGATTCATCTTATTCAAAAATGGATGGAGGATGCTGGTTTGAGAACGTTAGCCTTCTAAC TCCTTAGGCTCTTCATGGTTTTTCTGAAAACTTGACTGATACCTATGTTCTCTTTAGTTGGGTGGACCAAATGGGAAACG TACATGGCCGAGTCGAGGGTCCGAATGCAAATGCTGAAGCTTTATTGCTTGGATCTCACATGGTGAGACATTTATATCCT CAATTTATTTTGAATGAAACTGAACATTTCCTTCACATTTCGTGGAGATTTTAGGGAGTTGAGATTAATGGTGGTTGTGG ATACTTATGTTAACAGGACACTGTTGTTGATGCTGGGAAGTTTGATGGATCACTGGGAATAATCTCTGCCATTTCTGCGT TGAAGGTTATGCATGATAATGGAAAGCTGCAAAAGTTAAGGCGCCCTGTTGAGGTTAGTCAAGTAACTGATATAGTTTAC AACATTTTCTAAGGCCTTCACCTGTTTCAAAACAGACATTTGAACTTGAAAGTTCGATAAATCAATTTCTTGGGTTCCAA TTAATCTGATATACTGAAATCTCTTTTCTGTTAAGTATATACATTATTATAATTTCAAAAACATGGAAGGAGGGAGGGGG GGAATTCAGCTGCAAAAATACTTTGGAGAAAGAATGAATTACCTGATGAATAATTTCTGCAACCTATTTTGGCGGAAAGT ATCTAACTTAATCTTGTCTTTATTCAACTGTGTTAAATAAAAGCTCTTGTATAGCGGTAGAGGCCGGCTCCAAAAATGCT AGAGTGGTATAGCGCATAGAGGGATGGACGGCAAGCTAAATTTTTTATAGGGTTTACAGACATATATAAATGCAAAAGAA TGCTGAAAATGCACGGCATTCGTAATTAACAATAAAAGATCACAAGTGTCTTAATTATACAAGAATAATGGTGTATGCTC ACTGCTCATTGATTTTTTGTCTTATGATAATGGTGTGCACTGAGAAAAGATTCTCAAAAAATGCAAAAGGAAATGTTGAT TGGAACTATTCTACTGCTTTATTCCTGCCATCATATTCCAGTCCTAACATCTATCCTGCAGGTGATTGCATTTTGCGATG AAGAGGGCGTCAGATTTCAATCTACTTTCTTGGGCAGCGGTGCCATAGCTGGTATTTTGCCTGCCACAACATTGGAGATA CCGGATAAAAGGTTTCTCCTAGGAACTTTCTTCTTATGGTATAGTAAAATTTCATATAATCAATATACTTATTAATAGAT TTCTTTCAGGAATGCAACAGTAAGAGAAATTCTTAAGGAGAGCTCAATAGAAACCACAGAGGAAAGTTTTTTACAGCTCA AATATGACCCAAAATCTGTTTGGGGTTATGTTGAGGTACAACAAACATTTTCATTCTTCATCCATAGTGCTGTTTTGATC AATAACTTGACCAATATAGAACAAGTTGGTTTTCCACATTGAACAGGGTCAAAATTTTCTTGTATTTCTTAAATGCTGCA GGTCCACATTGAACAGGGTCCTGTGCTAGAACAAGTTGGTTTTCCACTTGGTGTGGTTAAAGGCATAGCTGGACAGACAC GATTGAAGGTGAAAAATAAGAATTGCTGTGGCGTGTTTCAATGCATGTAGTTTCTTGGACTAGTTTTGTTGGTTTCCTAT CATTTTAAACATATTATGTGATTTCAACAAGATATAGCAATGATAATCCAAATGGTCTGGCATACAAAGCTTTATTGTTT CGTGCATGTGGAACACATGATGTGAACTTGTCACCAAACTACTATCTACCTGCTAATCTTGGTCATTTGTGTGACTCTGT GTCTATTATTGGTTTATAAATAAACAATCATGCAGGTCACAGTCAGAGGCTCCCAAGGTCATGCTGGAACTGTTCCAATG TCCATGCGTCAGGATCCTATGGTGGCCGCTGCTGAACAAATTGTACTTATGGAAAGCCTCTGTAAACATCCTGAAGAATA CCTTTCTTATGATGGTCGTTGCAGTGATTCATCGGTGAAATCACTTTCGAGTTCGCTTGTTTGTACCGTTGGAGAGATAT CAACATGGCCAAGTGCCAGCAATGTCATTCCAGGCCAGGCAAGCGATGAGTTTCTAAAATGACACTGCTCTAGAAATTTC CAAGTGGGCAAGCTTTTTTCTTTCTTATCATGAGGATGATGACGCAATGTATTGATTTTTCACAGGTTACATATACCATG GATATTCGAGCAATTGATGACCTCGGGCGTGAGGCTGTTATCTATGATTTATCCAACCGAATCTATCAAATATGTGATAG GCGTTCAGTTTCCTGCATAATTGAACACAAGGTATGTTGATGGTGGTCTTTTGGCTTTGTTTGGATACATCTATGAAAAA ATGGTTCTGGTAGAGTAAAATCAATTATGGATGAAAGTATTGATGTTTAGGAATCATTTTAGAGAATTGATTTCATACCC AAAATCAATTCTGGTAGAAGCTAAGAGAGAGTAGCTTCTGCGTTGAACATAATTACACAATTTTACAATTGAATTTCACA ATATTGCCCTACATGAACCGCTTTTTCAAATATATATCCAAACATAAACCTCTTCATTTTCAACTCACTTTTACTATAAT CAATTTTACCAAAATCAATTGTGACAAACGCTGATCCAAACACGCACTTTGCTGTGATCACTTCAGCATAATGCAGGTGC TGTGATTTGTGATTCCGGACTGAGTTCACAGCTCAAGTCTGCAGCTTATTCTGCACTCAAGAGGATGGAGGGTGACATTC AAGAAGAAGTACCAACATTAATGAGTGGTGCAGGGCATGATGCAATGGCAATGTCTCACCTAACAAAGGTTTCATTTCTC AATTTTGCTGTATGAAGAAGGTTTTGAAACTTCAATTTTCTCTGCATGATATAACAATGAATGAGGATTTGAACAGGTGG GAATGCTGTTTGTGCGGTGTCGCGGAGGCATAAGTCACTCTCCAGAAGAGCATGTGCTGGACAATGATGTTTGGGCGGCT GGTCTAGCAACCTTATCATTTCTGGAAAACCTGCAATAACTATGTAAAGTAATTGTGTATATGTTAGAGCATGTAATTAT AGGTTAATTTTTTTAGTTTATTCATAATTCAACTGTTTCTTTAGCTTCTTGTCTCTCCTTACAGTTGTGCTTCATGTATT ATCGTGCATGTCATTGAAATTCAATAAGGTTTTATGTTAGCTGTGTCAACAGCCAAATGCAATTCTTCTTTTTTCCGAAC TTGAGAACTAGTTATGTAATGCATGTGGAGCACGAATTCTTATACATGTTCTTCGCCAATATCATATTGAAGC
CDS sequence (LotjaGi6g1v0244500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCCGCCACCACTATCTTCTTCAACCATTCATGCATCTTGTTACTGTGTCTGCTGTCAACACCTTCATGGACTTC TTCGTTTTCTGGTAGTGAAACTGGAGATTTAGAAAAAAGGGGTGATTTGTTTCCGCAGATTCTAAGAGATGAGGCAGTGG CAAGACTTCATGAGCTTGGGAAGGTGAGCGATGCTAGTGGCTATCTGGAGAGGACATTTTTGAGTCCTGCATCCTTGAGG GCGATTCATCTTATTCAAAAATGGATGGAGGATGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAACGTACATGGCCG AGTCGAGGGTCCGAATGCAAATGCTGAAGCTTTATTGCTTGGATCTCACATGGACACTGTTGTTGATGCTGGGAAGTTTG ATGGATCACTGGGAATAATCTCTGCCATTTCTGCGTTGAAGGTTATGCATGATAATGGAAAGCTGCAAAAGTTAAGGCGC CCTGTTGAGGTGATTGCATTTTGCGATGAAGAGGGCGTCAGATTTCAATCTACTTTCTTGGGCAGCGGTGCCATAGCTGG TATTTTGCCTGCCACAACATTGGAGATACCGGATAAAAGGAATGCAACAGTAAGAGAAATTCTTAAGGAGAGCTCAATAG AAACCACAGAGGAAAGTTTTTTACAGCTCAAATATGACCCAAAATCTGTTTGGGGTTATGTTGAGGTCCACATTGAACAG GGTCCTGTGCTAGAACAAGTTGGTTTTCCACTTGGTGTGGTTAAAGGCATAGCTGGACAGACACGATTGAAGGTCACAGT CAGAGGCTCCCAAGGTCATGCTGGAACTGTTCCAATGTCCATGCGTCAGGATCCTATGGTGGCCGCTGCTGAACAAATTG TACTTATGGAAAGCCTCTGTAAACATCCTGAAGAATACCTTTCTTATGATGGTCGTTGCAGTGATTCATCGGTGAAATCA CTTTCGAGTTCGCTTGTTTGTACCGTTGGAGAGATATCAACATGGCCAAGTGCCAGCAATGTCATTCCAGGCCAGGTTAC ATATACCATGGATATTCGAGCAATTGATGACCTCGGGCGTGAGGCTGTTATCTATGATTTATCCAACCGAATCTATCAAA TATGTGATAGGCGTTCAGTTTCCTGCATAATTGAACACAAGCATAATGCAGGTGCTGTGATTTGTGATTCCGGACTGAGT TCACAGCTCAAGTCTGCAGCTTATTCTGCACTCAAGAGGATGGAGGGTGACATTCAAGAAGAAGTACCAACATTAATGAG TGGTGCAGGGCATGATGCAATGGCAATGTCTCACCTAACAAAGGTGGGAATGCTGTTTGTGCGGTGTCGCGGAGGCATAA GTCACTCTCCAGAAGAGCATGTGCTGGACAATGATGTTTGGGCGGCTGGTCTAGCAACCTTATCATTTCTGGAAAACCTG CAATAA
Protein sequence (LotjaGi6g1v0244500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSATTIFFNHSCILLLCLLSTPSWTSSFSGSETGDLEKRGDLFPQILRDEAVARLHELGKVSDASGYLERTFLSPASLR AIHLIQKWMEDAGLRTWVDQMGNVHGRVEGPNANAEALLLGSHMDTVVDAGKFDGSLGIISAISALKVMHDNGKLQKLRR PVEVIAFCDEEGVRFQSTFLGSGAIAGILPATTLEIPDKRNATVREILKESSIETTEESFLQLKYDPKSVWGYVEVHIEQ GPVLEQVGFPLGVVKGIAGQTRLKVTVRGSQGHAGTVPMSMRQDPMVAAAEQIVLMESLCKHPEEYLSYDGRCSDSSVKS LSSSLVCTVGEISTWPSASNVIPGQVTYTMDIRAIDDLGREAVIYDLSNRIYQICDRRSVSCIIEHKHNAGAVICDSGLS SQLKSAAYSALKRMEGDIQEEVPTLMSGAGHDAMAMSHLTKVGMLFVRCRGGISHSPEEHVLDNDVWAAGLATLSFLENL Q
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 12 | 12 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| SignalP_EUK | 1 | 28 | 28 | - | – | |
| Phobius | 13 | 21 | 9 | - | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 481 | 455 | - | – | |
| PANTHER | 39 | 480 | 442 | 2.0E-202 | ||
| PANTHER | 39 | 480 | 442 | 2.0E-202 | – | |
| SUPERFAMILY | 44 | 480 | 437 | 7.18E-69 | – | |
| TIGRFAM | 52 | 473 | 422 | 4.4E-103 | ||
| CDD | 53 | 478 | 426 | 1.15142E-161 | – | |
| Gene3D | 65 | 468 | 404 | 5.2E-130 | – | |
| ProSitePatterns | 118 | 127 | 10 | - | ||
| Pfam | 119 | 469 | 351 | 9.9E-23 | ||
| Pfam | 259 | 369 | 111 | 2.1E-5 | ||
| Gene3D | 259 | 391 | 133 | 5.2E-130 | – | |
| SUPERFAMILY | 259 | 391 | 133 | 3.14E-23 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Metallopeptidase activity | Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2. |
Expression pattern of LotjaGi6g1v0244500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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