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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0186900 |
| Transcript ID | LotjaGi5g1v0186900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | N-carbamyl-L-amino acid amidohydrolase; TAIR: AT5G43600.1 ureidoglycolate amidohydrolase; Swiss-Prot: sp|Q8VXY9|UAH_ARATH Ureidoglycolate hydrolase; TrEMBL-Plants: tr|G7I3Z0|G7I3Z0_MEDTR N-carbamyl-L-amino acid amidohydrolase; Found in the gene: LotjaGi5g1v0186900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:47437924..47443661) extracted from Lotus japonicus Gifu genome v1.2.
GCCTTGGTCACATCCTATTTGACTAGCTAGTGATGAGTTGCGAATGGCTGAAGAATCACACCAACCGTACCTGCAAAAAT GGTTCACTCTATCTTCGTGCTCCTCCTCCTCTTGTTGTGCACCACCTTCTCTGCAATTTCATCTCATCAACAACACCCTT CAATCACCGCAACCATGGAGCAATTCTCTGGTTACAAAATTCATGGACCTCCTCACACTTTCATACCCACTTCCCTCTCC GTTGATGCTCAGGGTCTGCAGAACCAGGTATACTCAACCATCCCAGAAAGCCTGTGATTGTGGTGTTGCATAGTTTTTTG TTTCTGGGTTGTGATGATGATTGCTTATTGACGTTTTGTGCTGTACCTTGGTCTTAGATTGATGAGCTCTCAGCATTTTC TGACGCACCTGCCCCATCAGTAACCAGAGTCTTGTATACTGAGAAGGATGTTTTAGCTCGTAGGTATGTTGTATAAATAA AGTTTCAATTTAATTTTCCCCTTGTAGCAAACCTTTCTTTATCAAAAAAGTTGACTTTAACCTGTTAGAGCGGTTCAACA CTTTATCCCTTAAGCAAATGGTTGAGGGACCATTCCCAACTCTTGTAAATGGAAATAACTATTTGGTCAGCCTCCTACCG CTTAATACGCTCATAGTGGGATGATGAATTAGTCTCATAGTTACCGGCCATAGGGACAGCTTGGTTAATGACAAAAATAA AGAAAAAGTTGACTTTGGGTGAAAATAATAACCTATATATAATATGAGTAAAATAAGAGTGGCCTGCCCCTTTTATTTGT ATAGGAAAATATTATAATGGGTGCACTTGAGAACAAATCAATTGGTAAATGCTATGCAGATAGCTCTTGAAGAGACTTAA AAGACTAAAGAGATGAATTGTGTGTAGAGCTATAAAATTAGTTAAGGTTCTATGCAAAAGAACAGTGTTGATATAACGCT GCATAGATGCAAAGGTGATTTTAATGGTGCAGAAAGGAGGTATAAGTTTTATTTATCTAACTTTTGTATGTATAGCACTA CCTCTAAATAAACTATTCATTCTGCTACACAAATGTGCTTGACATATTTCTGTTTAGAATGATAGATGCCCACCTTTATA GACTTTAATCTTGTCTTCCATGTGTAGCTATGTAAAAGACCTCATGGGAGTTGCTGGTCTATCTGTGAGAGAGGATGCTG TTGGTAACATATTTGGTCGATGGTGAGTGTCTGATCCTTAAGTGCTTGTTTTGAAAAGCTCGCTGGATGAAACTCTGTTC CTAAAGCTTCTAATTCAATATTTACATTTATAATTATATTTCTCAGATATCTAAATTTTTATTAATTTGTCATTAACTAT GTTTTCAAGATCATATTAACATCACAATCTTCTATCATAGTTAAAGTGTGTCTCTAATTTACCAACTACGTTCATGGCTT TATCTTTGCTTGCTTTATCTAGGGAGGGCCAGGAACCCGAGCTTGCTGCTGTTGCAACAGGTTCGCACATTGATGCTATA CCTTACTCTGGAAAATATGATGGAGTTGTTGGTGTTTTAGGAGCTATTGAAGCCATCAGTGTCCTGAAAAGGTTTCTTAC TTTCTTATTATTGCTGATGTAGGATTTAACTGAATGTTCAGAATACTAAATTTTTTATAGCTATCTTCTGATAATTAGTG AGCAAGCCTGGAAGTTTCAACACCTTGAACTAAGAGAAAGATGACTTATTTTTGATAATTTTTTTGATAAATCTATACAT CCCTATTATCGAAATTTCTGAAGTTTGATGAATTGATGTTAGGCTTGAAAAAAAATCAATGTATTAATGTTTAACCAATA TATTATAGCTTATAAAAAAACCAATATATTATAGGACTAAACAATTTAATGAAAAACACAATAAGGTGTGTATTTACTAT GACAACTATATGGAAAAGAGAAGTTTCATACGTAACTAATTCCCTGTAATTACTTTGAGGAAGATCCAAGTTTCAAAGAT GTGATTTACAATATTCGATCATTATCCACTTTTGTGATATTCGCTGAAACCTTCACAGGTCTGGCTTTAAACCTAGAAGA CCATTGGAAGTCATATTGTTCACATCAGAAGAACCGACACGGTTTGGAATAAGTTGCTTGGGAAGGTCAGAAACAACATT TCTCAGAATAGGATTCCTACATGTGGCTTTTGTTGTCCATAAATCAACAATTCACCTTTATTCTCACAACTAATTTCATT TTACAATGTCTCATTGACTGAGTTACACCCCATATTCTACTTTAAGTTTCATCATTTGTTACTTATGTGCAGCCGCTTAT TGGCTGGGAGTGAGAATCTTGCAAATGCTCTAAAAACAGCAACTGATAGTCAAAACACATCCTTCTTAGATGCTGCAAGA TCTGCTGGGTATGCGAAAGATAAAGATGACTTATCTAGTGTATTTTTGAAGAAAGGAACATATTCTGCTTTTGTTGAACT GCACATAGAACAAGGGCCAATTCTGGAAGACGAAGGTACACATCGCTGGGCAAACTTAATCTTTGTATTAGCCATAACTT CAATTGATCATATGTATTTTGTTTCTTGACCCAGGTATATCTATAGGCATAGTTACTGCCATTGCAGCTCCAGCAAGTCT AAAGGTTGAATTTGAAGGCAATGGTGGTCATGCAGGCGCTGTCCTTATGCCTAACAGGTGGCTGCTATTTTAGAATGGAT ACTCCTTATGTCTTGCACCCTTATCCTTTTCTTTTGTTGCAGTAACTTGAACTGTAACACCCACATATTCTCCTTTCTAC TGTTGAGATCTTTGTTCTTTCTTCCTTTTGATGTGATATTCAAGTTCTTCTCATAGTTTTGAGTGAACTAATAGTAGCTT CAAGTAGCTTACTATCTCCTGATCCCATTACATTTGCTAGTCCACTACTTTTATCCCTTTAAAGTTGACGTTTCTTTGTT AATGAACTACTTCTAATGCATCAAGTATAATCTATTAATCACCTGGAGCAGAAATGATGCTGGACTAGCAGCTGCTGAAT TAGCCCTAGCTGTTGAGAAACACGTGTTGGAATCTGGGTCTATTGATACTGTTGGCACTGTCGGTAAGTAATTTTTGCAG ACACGCAGTACCTTATTTTGATAAATCTAGAGCTTTCATTAACATAACCTCTATAACTTTACAAGGTATCCTGGAACTAC ATCCCGGAGCAATCAACAGTATCCCTAGCAAATCACACATAGAAATTGGTACTTCTGTCATACCTGGCATTATAAAATGT TCAATTACAAGTGGTTTTGCCATGCACAAGTTATTTTTTTAAGTTAGTTACAGAGAATTGGTTTGATTTTCTCTCTACCT ATGGCTAACTCCAGTTATACTTGGTTATATGAATATTTGTATTGTAATATTTTTGATGTTGTTGAAGACACTAGAGACAT TGATGAGGAGAGAAGAAACCAAGTGATTGAGAAAATCCACCAATCAGCCATTAAAATAACTGAAACCCGAGGTGTCAAAC TCTCAGAGTTTCACATCGTCAATCAGGATCCACCAGCCCTTTCTGATGAAGCAGTCATCAATGCGATGGAAACTGCCACA ACAGTGTTAAACTTGACCAGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTATTTATGGCCAGGTAACTCCAGAG AGAAAGGCACAGATTGTTTTATTTATTTAATTTTTGTTACAATATTTGGGTTTTTATAAATTAGAAGTCTTGTTATGTTA GTAGACTTATTTGCCTAGTCACATTTTTTTAGAAGTTCTAGCGTTTTCTTTTTCCAATTACACTTCGGATATCAATCTAA TTTCATACAATCAGAATATTTTTTAGAGCCTTCTCTCATTATTTCCTTTATTTCTACCTAAACCCATAAATTCAACACTT AACTTTCTGACAGTAGCTGAACAGATCTTCAATGACACAACTCAGTCTAATAATACTTACAAGAAACGATAGAGGTTTGC TCTTATGTAAAATGGATATCTGCTACTCATGTAAGTTATACAATTGCAGGTTGTCTCCAATGGGCATGATTTTCATTCCA TGTTACAAAGGTATTTACCGTTTTACTTTTTGTTCTATATATGTCCTTACATGATACCATTTTTAGAAATATTTGTGCAA TCAACAACCAAAGGAAGGGGAGCAAAATGCAGTTTGTGCTCTTTTTTTTTAATTAATATAAAAAACCAACAATAATTGGA AAACAGAGCTCTAATCTCATATATAATATACATAGATGAGCTTAAAAGTTAAGAAGCAATGGATAGTTTTTTCATGTGGA ATGCTGATACATTCACATGCATGTGGACATGCTTTTGAGCTCTTAATCTGATCAAGCTGAGTAATGTTAAGCAGTTTTTT TCCCTGACAGCTTTATAAAGGAAAGTATGTATCAATATTATTGATTTCTTGTTCTTGATTTTACAGGGTACAGCCATAAG CCTGAAGAGTTTGCTAAAATTGAAGATATGTCAAATGGTGTAAGAGTGTTGGCTCTCACCTTGGCCAAATTGTCCCTTCA GTAATATCTTATTTAGTGATTGTAGTGTTGACTCTCATTGTAGAATAAATAAGTGCCATGAACCAAAACACAATAATGAT TTTCATATTATTCTTCTAACACGACTTCTCGCGTAAGAGCCCATTTGAAGCATGGACAACGTTGAGGCTCGAGGCTCTAA TGCCATGTTATAAATCAAATATACCAAAATTTTAAATCGCCAGGTGAAAATTACATGAATAGTTTAACAAAGAGGGTATT TTATTTACTTCTGTTACAGCTTAATAATCAATCAATTTTATATATACCTCTTTTGTCTATCAAAGTAAGAGGCTGAGCCA TGTAATAAGAAGAGTGGATCTTCAAAGAAAACATGTTATGGGAGTAAAATGATAACTACCTACAAAAGGGATTAGCAGCC AAAAGGTATTGTAAAAATGTAACAAACTGACTGCACAACTAAAAATCATACTAAGTTACTAACTGCACAGCTAACATATT AACTACTCACAAACTAATAACCGAAAAACTGACTAACTACTTACTTTATCTTCTAATACCCCTCATAAGCTGAGTAGTAA ATATTTAAAACTCCCAGCTGTGAACCAAATGAGAAAAAGGGGAGGTTCAAAAGCCTTTGTCAAAATATCAAAAGTTTGTT CTGGATAGGGAGAAGATGGAAGAGCTTAGCTTGAAGCTTCTCTCTCACAACATGACAATTAATGTCCATGTGTTTAGTGC GCTCGTGAAAGACAACATTGGCTGTTATATGTCTTGTAGGCTGACTATCACAATAGAGAAGAGCAGTGCTGATAAATGGT ATTTTCAAATCTAGAAGGATATATGTCAACCATTGAAGTTCACAAACAATTTGGAAGCAAAACCCTGTACTCACCTTAGG AAGATCTTGAGATTGTTGATTATTTCTTAGATTTCCAGGAAACAAGTGAGTCTCCTAATAAAACACGATACCCGGTAACA GATCTTCTAGTTGTTGAACAAGTCCCCTGTCTGAACCACTGAAAGCTTTAAGTTGTAATATCAAATATGCTAGTGACTGG ACAAAATAATCCATGACCTGGTGCTCCCTTAAGATATCTTAAGACTATTATGTCTGCTTGGTGATGATAAATGGTGGGGG AAGCCATAAATTAGCTAAGATGTTGGATAACAAATGAAATGTCTGACCTTGTAGTGGT
CDS sequence (LotjaGi5g1v0186900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCACTCTATCTTCGTGCTCCTCCTCCTCTTGTTGTGCACCACCTTCTCTGCAATTTCATCTCATCAACAACACCC TTCAATCACCGCAACCATGGAGCAATTCTCTGGTTACAAAATTCATGGACCTCCTCACACTTTCATACCCACTTCCCTCT CCGTTGATGCTCAGGGTCTGCAGAACCAGATTGATGAGCTCTCAGCATTTTCTGACGCACCTGCCCCATCAGTAACCAGA GTCTTGTATACTGAGAAGGATGTTTTAGCTCGTAGCTATGTAAAAGACCTCATGGGAGTTGCTGGTCTATCTGTGAGAGA GGATGCTGTTGGTAACATATTTGGTCGATGGGAGGGCCAGGAACCCGAGCTTGCTGCTGTTGCAACAGGTTCGCACATTG ATGCTATACCTTACTCTGGAAAATATGATGGAGTTGTTGGTGTTTTAGGAGCTATTGAAGCCATCAGTGTCCTGAAAAGG TCTGGCTTTAAACCTAGAAGACCATTGGAAGTCATATTGTTCACATCAGAAGAACCGACACGGTTTGGAATAAGTTGCTT GGGAAGCCGCTTATTGGCTGGGAGTGAGAATCTTGCAAATGCTCTAAAAACAGCAACTGATAGTCAAAACACATCCTTCT TAGATGCTGCAAGATCTGCTGGGTATGCGAAAGATAAAGATGACTTATCTAGTGTATTTTTGAAGAAAGGAACATATTCT GCTTTTGTTGAACTGCACATAGAACAAGGGCCAATTCTGGAAGACGAAGGTATATCTATAGGCATAGTTACTGCCATTGC AGCTCCAGCAAGTCTAAAGGTTGAATTTGAAGGCAATGGTGGTCATGCAGGCGCTGTCCTTATGCCTAACAGAAATGATG CTGGACTAGCAGCTGCTGAATTAGCCCTAGCTGTTGAGAAACACGTGTTGGAATCTGGGTCTATTGATACTGTTGGCACT GTCGGTATCCTGGAACTACATCCCGGAGCAATCAACAGTATCCCTAGCAAATCACACATAGAAATTGACACTAGAGACAT TGATGAGGAGAGAAGAAACCAAGTGATTGAGAAAATCCACCAATCAGCCATTAAAATAACTGAAACCCGAGGTGTCAAAC TCTCAGAGTTTCACATCGTCAATCAGGATCCACCAGCCCTTTCTGATGAAGCAGTCATCAATGCGATGGAAACTGCCACA ACAGTGTTAAACTTGACCAGCAAGTTGATGATTAGTAGAGCCTATCATGATTCATTATTTATGGCCAGGTTGTCTCCAAT GGGCATGATTTTCATTCCATGTTACAAAGGGTACAGCCATAAGCCTGAAGAGTTTGCTAAAATTGAAGATATGTCAAATG GTGTAAGAGTGTTGGCTCTCACCTTGGCCAAATTGTCCCTTCAGTAA
Protein sequence (LotjaGi5g1v0186900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVHSIFVLLLLLLCTTFSAISSHQQHPSITATMEQFSGYKIHGPPHTFIPTSLSVDAQGLQNQIDELSAFSDAPAPSVTR VLYTEKDVLARSYVKDLMGVAGLSVREDAVGNIFGRWEGQEPELAAVATGSHIDAIPYSGKYDGVVGVLGAIEAISVLKR SGFKPRRPLEVILFTSEEPTRFGISCLGSRLLAGSENLANALKTATDSQNTSFLDAARSAGYAKDKDDLSSVFLKKGTYS AFVELHIEQGPILEDEGISIGIVTAIAAPASLKVEFEGNGGHAGAVLMPNRNDAGLAAAELALAVEKHVLESGSIDTVGT VGILELHPGAINSIPSKSHIEIDTRDIDEERRNQVIEKIHQSAIKITETRGVKLSEFHIVNQDPPALSDEAVINAMETAT TVLNLTSKLMISRAYHDSLFMARLSPMGMIFIPCYKGYSHKPEEFAKIEDMSNGVRVLALTLAKLSLQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 19 | 19 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 19 | 19 | - | – | |
| Phobius | 4 | 14 | 11 | - | – | |
| PANTHER | 9 | 468 | 460 | 3.2E-261 | ||
| PANTHER | 9 | 468 | 460 | 3.2E-261 | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Phobius | 20 | 468 | 449 | - | – | |
| SUPERFAMILY | 50 | 465 | 416 | 1.91E-76 | – | |
| PIRSF | 52 | 468 | 417 | 1.2E-140 | ||
| TIGRFAM | 59 | 464 | 406 | 6.1E-109 | ||
| CDD | 60 | 463 | 404 | 2.62334E-167 | – | |
| Gene3D | 70 | 458 | 389 | 4.1E-136 | – | |
| Pfam | 129 | 463 | 335 | 2.8E-30 | ||
| Gene3D | 268 | 384 | 117 | 4.1E-136 | – | |
| SUPERFAMILY | 271 | 384 | 114 | 2.24E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2. |
Expression pattern of LotjaGi5g1v0186900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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