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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0428600 |
| Transcript ID | LotjaGi3g1v0428600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IAA-amino acid hydrolase ILR1-like protein; TAIR: AT1G51760.1 peptidase M20/M25/M40 family protein; Swiss-Prot: sp|O04373|ILL4_ARATH IAA-amino acid hydrolase ILR1-like 4; TrEMBL-Plants: tr|I3T1Y7|I3T1Y7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0428600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83989672..83993482) extracted from Lotus japonicus Gifu genome v1.2.
AAATAACTTTGCCTACGGAGTGGGACCTGCCGCAATCTTCTATGAAAAGAAACTCACGACCCTTTCACTTTCACTCTGTA CATTCTGGTTACTCGCTGTTAACAAACCATGGCTTCCTTCAAATGCTTCCATTTTTTCATCATCACTTTGCAAGTTTTTG CTGCAATACCCATTTTCTCATTAGCAGATTCCTCCTTCACACAAAATCAGCTCTTCACAAAGTTCCTAGACACTGCCAAG AAACCTGAGCTTTTTGATTGGATGCTCACTATCAGAAGGAAGATACACCAGTTTCCTGAATTGGCCTATCAAGAATTTCA AACCAGTGAAGTCATAAGAGCAGAATTGGATAAGTTGGGGATCCCCTATAAACACCCTGTTGCAGAAACTGGTGTTATTG GCTTCATAGGGTCTGGAAAGTCACCTTTTGTTGCCTTAAGAGCTGATATAGATGCTCTTCCCATGCAAGTAGGTTTCATA AATTCTATTTACCTTTTTTCTTGATAAAGATGGGTTGACTTTTTTTTTTCAGAAATTTAGAATCAGGGTTTTGACTTTTG ATTTCTGAAATTTTTATGGGTTGGTTCAGTTCTAGCTATCTGGAGGTGAGATAACAAAGATTATTGTTTTCTCTTTCCTC AAATTTTATTGACATTTGACAATGTTTTTATAAACCATAGGAAATGGTGGAGTGGGAGCACATGAGTCAAGTAGATGGAA AGATGCATGCTTGTGGTCATGATGCTCATACTACAATGCTTCTTGGTGCTGCTAAGATTCTCAAACAGCATGAAAATGAG ATTAAGGTGTGACCTTTTATACTGCCTTCTCTGTTTCTATTTTGAGTTTTTTTTTTAGATACTACTCTTCCCACATGTGG TCACTGGTCCCTACTGTCTGGTCCTTTTGATGATTTATTTACCTTTTTCTCTAAAGAAAACTGCATTTATGTCAAACCTA AGTACCTTTTTGGTTTCTGTCATTTCAGAAAATTGATGCCAAATTATTCCATCATGTAAATTTGTTTTTTTGGTAAATTA CAAGCTTTCTGCCATCTATCATGCACCTTAATAAATCTGTTCTGTCTATTGTAATACAATCTTGATCTTGAAGTTGCCCC CTTAACATTTTGTTATACCAGAACAATCATCATCCTCCCATGGATCCTTGATAAGTTGGTTACTTTGCTGTCTAAATAGG GAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGCTGCAGGGGCTAAGAAAATTGTTGAATCTGGAGCCTTGGAA AATGTATCTGCTATCTTTGGATTGCATGTGCTACCTACGCTTCCAGTAGGTGAAGTGGCTTCTAGATCTGGTCCTTTAAT GGCAGGGTCTGGTCGGTTTGAAGCAATTATCAATGGAAAGGGAGGTCATGCAGCTATTCCTCATACTGCTGTTGACCCGA TTTTGGCGGCTTCGAATGTAGTTATTAGCTTACAATACCTTGTTTCTCGCGAGGCTGATCCTTTGGACTCCCAGGTAAAT TTAGTTCATTCTTAGTTTTCCATTGTTTGCCATGGCCACTCATTTACTTGTTTATGTCCAAAATCCTCCTTGTCTTCTTC ACATAGGTTGTGACGGTTGCAAAGTTTCAAGCTGGGAGTGCATTCAATGTTATTCCAGATTATGTCACAATTGATGGAAC CTTTAGAGCTTTTACCACAGAAAGCTTGGAGTACCTGAGACACCGCATTGAGCAGGTATGTCATGTAGAAGAATAGATTC ATTCTGCTAGCATAAATTGATTTCTGAAATTAATGATGATCTTTTCTATACTATACATCATCACCATACAACAATCTTTT TTCTTTATCTTTTTTCTCGTTGTTAAATTATCTGATGGCTTGAATATGCATGATTTTGCCAAACTCAATTGTTACGGAAA ACTATAAGTAATGCTATCTTTCACAGGATCAACTATAAGCTTTTATGAGTTTATGTTGCAACAAAAAAAATGTTTACACT TGTACTGTAATTTCACTGCAATCTTGATAGGGGCTAAGAAATGGTACATTTACACAGGTTATCGTTGGACAAGCAGCTGT GCAGAGGTGCAATGCAACTGTCAACTTCCATGATGAAGTGAATCCTTCCTATCCTCCAACTATAAATGATGATGGCTTGC ACGAGCAGTTTCGAGATGTTGCGGTGAATTTGCTCGGTGCAGATAAAGTTCACATTGACATGCCGCCAATGACGGCTTCT GAAGACTTCTCATACTATCAAAAGGTCATGTCTGGCTACTTCTTTTTTCTTGGGATTCAGAAGGATCACCGGCCTCATTT TTTGCACTCACCGTATCTCATGATCGATGAAGAAGGTCTTCCTTATGGAGCTGCACTTCATGCCTCATTAGCTATTAATT ATCTTCAAAAACATCAGCAACAAGGACCAACGGGGGAAGGGAAATTTCGTGATGAGTTATAGTTGTTATTAACCATTTTA AGCTTCCAGCCTTAAGGGAATTATAAGTTAGAATTTCCACTTGGAAAATGTTACTGCTATCTTGATGTAATTCCTTTCTT CATAGTACACGTAACTTCAACTTGAATAACAATAAATTTTCATTCACACCTATTTAGGTACAAATTTAACTGATGAGCAA TGTGACATTAGATAGGAATTTTGTGGATTATTAAATCTAGCAGCTTATGAGTTTGATGTGTTTCAATGACCAGGTATAGT TGCCAACTTGGGTTGGCACAACCGATTACCGGTTCAGGGTTTAACTCTCGTCTCCCCATAGGTCGAGGATTCAAATCCCC CTGGATTCAGTAAAATCCTAGTTGGTGGGCAATTCTCCTCGAAGAGATCCCCCGGCGCTCCTACATGGGAGTGGCCCTTT GTTGGCCTCCTCAGCATGTCATTGACGCCATATCCGATATCTGAAGGTATTATCTCTCCGTTCTATCATTCTTTGTATAT AAAAAAAAATAAAAATAACAAGTTTACAATTCTTAAATTTCCTGTTGTTTTATATATTGCTAGTCTAAGTATATTTTCTT TTTGATATTCCTTCATATTCTTTTGAGGCAGTTAATAATGTCATTTCGTTCAACCATTCTACTAATATTTCTCTTCTATT TTTTACAGTCTAAATTTAGTATGTTTCTATATTTTACTACTAACCTCTTATATGGTGTTCTATATGGTTCTTTTTTATAA TCATAATTACGTTAAATTTCACTAAAATTTCTTTTCTTAGTTGAAGTTTCTCCTTCTTCACACAAATGGAGGTTTTGGAG CCATATAATGAATTGTCATAACCAGAATCACAAAACTGCATAATGGTTCACGTTCTTTCTATCTTGGACAGAACCACATA TTTGATGGGAAATAAGCAGGGGCTGGAACTTGTTGGAATTGTGCCTTTTAATTAGGGGCGGAGCCACAAGGGTGGCTTAC CGGTGCTCCGCGCCCCCGAGTCTTTTCGATATTCATTTCGAAACTATGTATATTTTTCTTCTAGCACCGGTGATAATTAA TATAATTTTCAACGTAGAATAGATCATGTAACGCACAATGGCGTAGCGGTTTGCACATGAAAGGATTTTCTACATGTCGT GGGTTCGAATAAATGATAGGACTAGGAATCGAACCTCCTACTCCTAGGCTAAAAGTTTCATAGGCATGTTTTCCACTATG CTGGAAGAAGTTTATCCTTATATTTGAAAATTTTATATATTTATACACAAACATAATATCATAATTGGACACTTTCTCAT CTCAATTCATTTACACATATTTTTTTTTGAAGAATTTACTAACAACTAACC
CDS sequence (LotjaGi3g1v0428600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCTTCAAATGCTTCCATTTTTTCATCATCACTTTGCAAGTTTTTGCTGCAATACCCATTTTCTCATTAGCAGA TTCCTCCTTCACACAAAATCAGCTCTTCACAAAGTTCCTAGACACTGCCAAGAAACCTGAGCTTTTTGATTGGATGCTCA CTATCAGAAGGAAGATACACCAGTTTCCTGAATTGGCCTATCAAGAATTTCAAACCAGTGAAGTCATAAGAGCAGAATTG GATAAGTTGGGGATCCCCTATAAACACCCTGTTGCAGAAACTGGTGTTATTGGCTTCATAGGGTCTGGAAAGTCACCTTT TGTTGCCTTAAGAGCTGATATAGATGCTCTTCCCATGCAAGAAATGGTGGAGTGGGAGCACATGAGTCAAGTAGATGGAA AGATGCATGCTTGTGGTCATGATGCTCATACTACAATGCTTCTTGGTGCTGCTAAGATTCTCAAACAGCATGAAAATGAG ATTAAGGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGCTGCAGGGGCTAAGAAAATTGTTGAATCTGGAGC CTTGGAAAATGTATCTGCTATCTTTGGATTGCATGTGCTACCTACGCTTCCAGTAGGTGAAGTGGCTTCTAGATCTGGTC CTTTAATGGCAGGGTCTGGTCGGTTTGAAGCAATTATCAATGGAAAGGGAGGTCATGCAGCTATTCCTCATACTGCTGTT GACCCGATTTTGGCGGCTTCGAATGTAGTTATTAGCTTACAATACCTTGTTTCTCGCGAGGCTGATCCTTTGGACTCCCA GGTTGTGACGGTTGCAAAGTTTCAAGCTGGGAGTGCATTCAATGTTATTCCAGATTATGTCACAATTGATGGAACCTTTA GAGCTTTTACCACAGAAAGCTTGGAGTACCTGAGACACCGCATTGAGCAGGTTATCGTTGGACAAGCAGCTGTGCAGAGG TGCAATGCAACTGTCAACTTCCATGATGAAGTGAATCCTTCCTATCCTCCAACTATAAATGATGATGGCTTGCACGAGCA GTTTCGAGATGTTGCGGTGAATTTGCTCGGTGCAGATAAAGTTCACATTGACATGCCGCCAATGACGGCTTCTGAAGACT TCTCATACTATCAAAAGGTCATGTCTGGCTACTTCTTTTTTCTTGGGATTCAGAAGGATCACCGGCCTCATTTTTTGCAC TCACCGTATCTCATGATCGATGAAGAAGGTCTTCCTTATGGAGCTGCACTTCATGCCTCATTAGCTATTAATTATCTTCA AAAACATCAGCAACAAGGACCAACGGGGGAAGGGAAATTTCGTGATGAGTTATAG
Protein sequence (LotjaGi3g1v0428600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASFKCFHFFIITLQVFAAIPIFSLADSSFTQNQLFTKFLDTAKKPELFDWMLTIRRKIHQFPELAYQEFQTSEVIRAEL DKLGIPYKHPVAETGVIGFIGSGKSPFVALRADIDALPMQEMVEWEHMSQVDGKMHACGHDAHTTMLLGAAKILKQHENE IKGTVVLVFQPAEEGAAGAKKIVESGALENVSAIFGLHVLPTLPVGEVASRSGPLMAGSGRFEAIINGKGGHAAIPHTAV DPILAASNVVISLQYLVSREADPLDSQVVTVAKFQAGSAFNVIPDYVTIDGTFRAFTTESLEYLRHRIEQVIVGQAAVQR CNATVNFHDEVNPSYPPTINDDGLHEQFRDVAVNLLGADKVHIDMPPMTASEDFSYYQKVMSGYFFFLGIQKDHRPHFLH SPYLMIDEEGLPYGAALHASLAINYLQKHQQQGPTGEGKFRDEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 444 | 444 | 5.4E-226 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| PANTHER | 1 | 444 | 444 | 5.4E-226 | – | |
| Phobius | 6 | 14 | 9 | - | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 15 | 18 | 4 | - | – | |
| Phobius | 19 | 444 | 426 | - | – | |
| PIRSF | 37 | 430 | 394 | 1.4E-129 | ||
| SUPERFAMILY | 47 | 428 | 382 | 3.59E-85 | – | |
| CDD | 52 | 426 | 375 | 0.0 | – | |
| TIGRFAM | 52 | 413 | 362 | 3.0E-113 | ||
| Gene3D | 53 | 419 | 367 | 3.5E-134 | – | |
| Pfam | 109 | 422 | 314 | 2.3E-34 | ||
| Gene3D | 217 | 336 | 120 | 3.5E-134 | – | |
| Pfam | 218 | 312 | 95 | 4.6E-11 | ||
| SUPERFAMILY | 218 | 327 | 110 | 4.97E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi3g1v0428600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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