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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0059200 |
| Transcript ID | LotjaGi3g1v0059200.4 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | SURP and G-patch domain-containing protein 1-like protein; TAIR: AT3G52120.4 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein; Swiss-Prot: sp|Q94C11|SUGP1_ARATH SURP and G-patch domain-containing protein 1-like protein; TrEMBL-Plants: tr|A0A1J7GF04|A0A1J7GF04_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0059200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6219332..6228102) extracted from Lotus japonicus Gifu genome v1.2.
TCAGGAACCAAATTGACACCCAAGGATGAAAGTAGATGACACTACAACTTCAAGGACCAAATATACTATTCACTCTTTTT TGTTCCCTTTATTTGTTTTTGGCCATTGATAACATATTAACATCCAATAAAAGTTGTGCTTCATTCAACGAAACGGTGAG CAATTCATGATTCATCGATAACCCTCTTTGCTTCTCCATCGTTGTTGTTCATCAAACACAGATTTTTATCCAAATCATCA TCGATTGCATCAAATTTCACAGAGAACAACGTCATTAGGTTTATCTCTCGTTCTTCTTTCCTCTGTTGTTCCTTAGTTGA TGTAATTCTCTTGAAGAATTTTGAGAGAGTGTGGACATTGATTTTTAGGGTTTTGTTTCGGGATCATATTGTACGAATCG ATTGGGGGTTTGATTCAATCAACTTCATCGCTTGCAAATTTTCACTCTATTATCATATGAATTCACCTGTAGGTAGCTTT TGCTTTAGGATTTCTCGGTTTGTAGGATCTGGTCTAGGATTTGATTGGTTTTTATGGTTTCATATGAATTTACATGAACT TTTACTTTATAGGGTATTGGAATTTTTTCAAGGTTGATTTTCATCTGAAGATTTCAGGGGAAAGTTAGGTAATGGCATGT TATTGTATGCCAATTTGATGACACTTAGGTAATGAAACTTAGGTCATGACACATGTGCTCAATGATTACAAAGGCAGAGA AAAAAGTTGGTATTTTTACATGAAGTAGCAAGGATGCAAGCTTAATGTTGGCTAGTTTAAATTGGCCTGGAAGTTTTACA TTTTCATTATCAGTTAAACTGTTTTAGATAAAATGACTTAGGAGCATTCACATTTTAGAATTTGCTTTTGAGTTATTATC AGTTTGTGTTCTAACTTCTAAGCAGGGTTTTGTTGTGGATGACTTCTGGTCTGAAATTCATATTTTTTTGTTTGTGATCT GTACTCTTTATTAGGGCATTAATTGTTAATATACAACACTACATTCTTTTTGTAAGTTTTAAATGACATCATATATCAGA ACGAAATAAACTCAGTCAGACTTTAAATTTAACTGCATCATCTGAAAATCTTTTTAGCTTGCTTGTCAAACAGTGAGTTG CTGTAAGCTACACCATTTCTCTTGGCTGTTATCTAATGGATAAGGGACCACCTCATAGCCTTTTTGTTAATGATGGTTCG TTCATGGCGAGGTTCAAGCAGCTTCAACAAGAGCAGGGGAAGGGGAAGAATACCAAATTAGAGGATTCTAAACCAATTAA AGTTGTTTCTAGACCGCTGACTCCTAATCCTTCCATTGGTAAGGCTACTGATGCACGAAAAACTTCCCAGGCTGGTTCTA GTGGCAAACTTGCTTTCAGTTTAAAGCAAAAATCAAAGCTAGTTCCACCCCCTATTAAGTTGACTGATGAGGATGAAGAA GAAACTAATGCCGGGGATGTTTCAAATGACGCACCGTCGAAACGGCAAAAGTTGGGTCAGGATGATGATGCTGAGCAATC ATCAAGACCACTTGATGTTGGTAATTACTTCTCACATAAGCTATATGCACATGTTTGGTTTGTGGTTAGTATTCTATTTC CCATCAAATGCATGAGGGAGGAATTATCAAGTAAAATAATCAAATAATGGTTCTATGTTGTGATCCATGTAGTGTGTCAT GATGTAATTATCCCAAAAGTTTAAGCTATTGGGTAAATAACGCATGAATGGTTTAATATTATATTTCTTACATGCACCCT CATGCAAAAGCCCAATGGGCTTGAAGCGTGGACAATGCATAGACAACCTACCTACCTTGTGCTTTTTATTCAACTTTTTA TTAGAATAATTATAGACACATCAAGGATCAAACTCTAGACCACTTTGTCATAGAGGCTCTGATAGCATTTCATGAACTAA CATATGAAAATAAGATCAAAATAATTTATAGGTAGGTCATAAGTTATTTTCATAAGCTTGCCTAGACATTTGCATTAACG TATATGCTATAAGGTAAAGCTCAAATAAGATCTTCCAAATACAGCCTAAGTAGACGAAGAGTAAAAATCAGTTGTCTTTT TGGGTGTCTTTGTGAATCATGTACTGAACTTCCTTGATTTAGTTGAAGGAAGATTGAAAGTTGGTTGCCTCAGCTAAATG AGGCATACAATTGCATTCATACTATTTATTGCTTCCATTTTTCTTCTCATATAAACTATAAAGTAGAGTCCTCCTCTACA TTAAGCTCAGTTTCATTACTGAAGGGGTAATTAGTATATTCCTTCTTTGCCAAGTGAAGTGGCATTTAGTTGAAGGAAGA TTGAAGTTGGTTGCCTCAGCTAAATGAGACATACAATTTGCATTCACAGTTTCACACTGCTTTTTGCATCCTTTATCTTC TCGTATAAAGTAGAGCCTTCCTCTACGTTAAGCTCAGTTTCATTACTGAAGGGGTAATCGGTATATTCCTTCTTTGCTAA GTGAAGTGGCATTCAGCAAAGAGGAGAAAGTGTCTTGAATATTTTGTATCATGAATGCAGCTTATTCCTCATGTACCTAT CAAGAATGGTGTATTGGCACGCCTGCTACGAGAGTAATTTCCATTCCCTTGTTCATGCTCTCGGTATTAATAAGTTTTAT AAGTGATATGCAGCACCTCCTTCACCTAGTGATCCTACTGTGAAGAAAGTTGCTGACAAACTAGCAAGTTTTGTGGCAAA AAACGGAAGGCAATTTGAGGATGTTACACGCCAAAAAAATCCTGGCGATACACCTTTCAAGTATGTTTAGAGTGAACTCA TAACTATGTTGCCTTGATCTTTTGCTTAATGTTCCTAGTTTCGAATGTAATGTAAATATGTGTTGTTTGTTTTAACATGC AGGTTTTTATTTGATGAACGATGTGCTGACTACAAATATTATGAATATAGGCTCGGACAAGAGGAAAAGACCCTTTTGCA GTATAGGGAACCACAGGCAATTCATTATGGTTAGTTTTTGTTATGAGTTTGGAATTTGATAAAATAATACTTGTATTTCA TTCATAATACTTGACTAGACTACAATATATATATAGACTAACAAAGAGATTAAAACAAACTAAATCTATCTCAACCTATA TCTATTTAAATAGATATTATCTCTATTTAAATAGATACTAATCTAAAATAGATAAACAAATCTTAACTATATCTCTATGA GATAGCACTAATAATAAACTAAATCTTAACAGATATTCAACACTCCCCCTCAAGCTAAAGCTTACTTAGCTTTAAGCTTG TAACAAATCTAACCCAAGAAGAAAATTATCTTAATAGATATCCCTTAATAATGACGGTCTTGGCGAATCTCTGAATTGAA TAACTTTCAAACTTCTAGTAAATCCTTGGCGGCAAAAAACAACTTCTCATACTTGATCTGGCTGAAATTGATGCAAGACA AAAACCAATTCTTCTGGAGTGTCGTAGGGTAGCTGAGCCAGCAAACAAGGGCGAAAAACCAGCAACAATACGCCCGAAAA CAAAACAAGGCTGAAGCAACAACTCACCAACAACAACCACACAGAAATAAAACATACTTGAGGTCGATCGATTGATGGCT TCTAAGACAAACAATGGTGTCAACTTTGACACAGACAACTCTCAAACATTAGAGAGTGGGCCAGCGCAACTCGCAGCTGA AGCCCTAAAACCAACAAACCAAACAATCGAGACAAAACAAACGAAGGTGACACTGTCACCTTCAAAACCAAATTGCATAA AGTCAGCCAAGATCAATATAATAAGAGCATCTCGAACAATGAGACGCAAACAACAACTCAAGTCTCAAAAACCAATGCGG AACCTGAGCGTCAAAACAGAGTTAAAACTCTAAACCAAACCAAACCAAACCAAACTAAACCAAACCAAACCAAACCAAAC CAAACTTGGCCAACAATGAGAGATGGCACAACACACGTCAAAACAGAGGATCCTTAAAACCAAACCTAGCTGATACACAA AGAGGACCAGCGAGAACAAAGCAGCGGAGAGAGCGGCGCAATCTGGCTGATACACAAAGAGGACCAGCGAAAACAAAGAA GCGGAGATAGCGGCGCGTGGACTTCACACGCAGAGAGATGGGAGGCGCGTGGCTTGGAATCCGGCGGCGGTGGCTGACTG TAGTCTCTAAGATACTTAACAATACCTAACACTTCCCCTCAAGCTATAGCATATATGTCATATGCATAGCTTGTAACAAA TATAATTAAGATTTAACAATATCCAGATCCTCCCCTCAAGCTAGAGCATATATGTCATATGCATAGCTTGTAACAAATAT AATTAACTTGAGAAGTCGCTGCTGCCGGAGAGAGATATTCCCAATAATAGTCCAAAATTTATACACCAACAAACCACACA ATGCAAAACCAATTCTGCACTTTAATAGAGAGCAAAAATCTTTTCCAACTCCAAAACCACACTGTGCCATCAAAGAAACA AGAAACCAAAACAAGAAACTAGAGCCAACCATGTTCTGAATCTTAAGATCCTTAAATTTAGCGTTGAAACAAGTTTTTGA GTAATACGAGCATACTTCCTTGCTGCCAATCTGGACCAATGGACTTCTGGAATGGAACAGGGAGGAGAGGAAGACCGGTT CTGGGCAAGAACCGCCAAAAACCGAGAACTGAAATTCTTAGAATCTGGAGAACATGTGGGCAAAAAGGAAAGAGAACAAG CGTGAGGGCACCATGTGTCTTGCCACAACTACACCAATTGTAGTTTTAAGTCCTAGTTTAGACTACCAAGAGTAACCAAA AGTGATAACTACTGTCCACCAAACCACTGCTCCATCAACAACTTGCAAACGAAACCCAAAGATGCAAAAACCACAGTAAC AGAATTCCACAGTAGCATGGTTCAGACACTTTAACACGAGTCACGGCCACAAACGACACGCAAGAAGGGCAGATATGGAG AAACCGACCGCTGGAACAGAATCAAGAGAGCATGGCGAACCTTTCTGTGGAAGCGGCATCACGAACGATGGCTGGGAAGG CGGCACAGCGAACCGACCGTTGATTTGATAGTGGTTGAACATTACTAGGGTTCCAAGAGAAAGGGAGCCATAATCAGAAA GAAACGAGGCCGTAAGAAAACGGCTAGAACTAACAAGCGGAAGCAAAGTAAGAAAAATAAATCCAAAGAGATTTGGAAAG TCACCATGAGGGGGCTCACGGGGGAGGAGCCCCCTCACAGCGGAGGGATCAAAACTAGCTCTGATACCAACTTGAATTTG ATAAAATAATACTTGTATTTCATTCATAATACTTGACTAGACTACAATATATATATAGACTAACAAAGAGATTAAAACAA ACTAAATCTATCTCAACCTATATCTATTTAAATAGATATTATCTCTATTTAAATAGATACTAATCTAAAATAGATAAACA AATCTTAACTATATCTCTATGAGATAGCACTAATAATAAACTAAATCTTAACAGATATTCAACAGTCTCATTGTGGGCAA GAAATCTGACAGTTATTGCAACATACAAGATTTAAATAATTTGATAGATAAGATCATAGTAGTCAAGATCGCGACTAAAA TTGCTTAATCGCTTAATTATGTGACTAATGGTTCCCTGGGCGATTAAAATCTCATATGTTATCTTTTTCTGGCTTAATCA TGGCATAATAGTCAGATTAGTTGCCTCCATAATCACACCAGAAAGTATTTTTTTTTTCTTTGTTATTTATGCTATTTTAT ATGCATACATATGAATTTATAAGCATATATATTTGCTAAATCCTATGCTTTTGTGATTTACGATTAACACCCCCCCCCCC CCCTCTTTGACTACAGTCACAATCCCTATTATGACTTCTATGGATAAGATATAACCATGTTCTCAGAATTATTTTACAAT CTGTGAGAGGTTAAACCGCTAATATGTGACATTATTGGGCTTCCTAGTCAATGATGTCTCATCATGAAGAAAATTATAAT TTCACATTTTTTAAGAGTTATTTGTAATAACTGCAATGATTTTATTGGTATGGGTTGATGCTTGAATCAGTAGCCATATT TCATGCTTCTTTCACCTGCCAATATGTAGATATGTGAAGAGTTGCCATGGTTGTACTATATTCGGTAGCATTTTTTTAAT TGGGCTCCCTGGCTCTCTCTGGTCCCTGGAATATGCTTTCTGTTTTCTCTTGACGTGGGTTTATTTGAACTTGGTGTGTA ATGGTGAACAATTCAATTTATAAGGGGTACAAGCAGTGGCGGAGCCATGTTGAGACAGGGGAGGGCTGCAGCCCCCCATA GGTCACGTTTTAATTGGTATATATATGTACCTACGCATAATATTTTATATGATGTGTGTTGTCCCAATGGTTGTTACTCA TGCTGTATTACTGGTAGGTAGCGTCTTCAATTCCTGCCCAAGCCATTTTTTAATTATATTCCATTTTGACAAGCTTGTTT GTGTTTTTTCTAGGTATGTAAATTTGTACAATTAATTAGTGCAAGAATTAAAATATTATTTTATTGCAAGAGGAAAGCTA ATAGTCTTTTTTTGGTACAAAGAAAAGCTAATAGTCTTAGAGCATAACATTAATATATAAATTTCTCTAATAACTAAAAG AATATTATTAGTATAACTTATAATAAATTTTCAATAAGTATATAATTTAGTTTAGTCATTAATTTTTATGTATATATGTC TATATAAGTCCATTCGAAATAAAAATCTTTAATTTATGTTTAATATTTTATTTTAATTTAGCCCCCTCATTATATTTTTT CTAGTTCCGCCACTGGGTACAAGCATATCGTCTTCCAGACCAGCAAATGGTCCTCAGAGGTCTTCTGAGCAGCGGCCAAC TTACCAAATCCCTGCTTCTGCTTTATATGAAAGTGGTGATGTACCAAGAACTTCGGGATCTTCAGTGCAAGCATTATCAG TTGTAAGCTCTGGTAAGGGATATATATACAGCAGGGTTGATTTGGTTTTGTATTTTTCTTCTTTGATTCATCTGTTTAAT CTGGCATTTAACTGTCATTTTGAATTAGATCAAGGTTTGGTTGATTCAAAATTGCTTAGTTGCATTGCATTTAAAAGATG TGGAGATATAGGGACTGTTTCAGTTCTAGAAAATCTTCTCATAGGTTTTGTGTGTAACTTTTTTGTTGACGCATGCATTT TTATATATCTGTTGCAGCTGAGCCCAGTGGATCATCAAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAAAG CTGCACGGGAAGAAAGGTCAAAACAACCTAAGCAGTCAAAAGATGAGATGCCCCCTCCTGCTTCTCTTCAAGGTACAAAT TTTGAGTGCAATCGTGACCGAGTGTTTCTTGGTCCTGGATACATTTTAGTTAAAACGGTCTGAATTCTAGTCTTTGTTTC AATGGAGTAATCTTATGATTGCTTCCTTTTGGATTCAGGGAAGAAAGGCCATCATATGGGTGATTATATTCCCCTTGAAG AACTTGAGAAGTTCATGGCTAGCTGTAATGATGCTGGAGCACAGAAAGTTTTGAAGGAGACTGCAGAGAAGGCCAAAATC CAGGCGGATAATGTGGGCCACAAGCTTCTATCAAAAATGGGTTGGAAAGAAGGTGCTGTATACTTTTCTCAGTTTTATGC CTTTCAAGAGGATTAATGAATCATTAATGCATTTTATGTTAGCATGTTTAAGAAAATTTGCCTTTTGATATGGAATGTAA CTACAGAACTTGCTTCAAGTTTTTGCCTTGTCTGATTTAAATAATTTGTTATATATTATTGAAGACTATTACATGATAAT TACATTTATGTGATATTTATAAATTTATATATCCGTGATATCTTGCACTGCTAACCATTATTATAATCTTATATCCAGGT GAGGGTTTAGGCGGCTCCAGGAAGGGTATTTCGGATCCTATCATGGCGGGAAATGTTAAGAAAGATCACTTGGGAGTAGG TGCTGTCCAACCTGGGGAGGTGACTTCTGAAGATGACATATATGAGCAGTACAAAAAGCGCATGATGCTTGGCTACCGTC ACAGACCCAATCCTCTGGTAAATGACCTCTCTATTCTGAACCGTTTTGCAGTGGTGACACGGTGAGTTACTTAACCTGTT CTCATGTTGTAATTGTTTTGTTTTTACAGAACAATCCTCGCAAGGCGTATTACTGAACATCACGAATGAAGCCTTGTGCC ATGTTCATTGTTGGAGATATGGATTGATGTGGTAATAGGCTAACAGGATTTTGTAAACATTTATGTTTTATGATAGGTTT TGCATATGTTGAACATGATATTTTTCTTGTATTATTGGAGGGTAGGGATATGGTTGTGGTTTATCGACCACAAGTTAGCA AACGAAGGTAATGTTTTCACTGTTGGGCTTCGGAATATGTTATCTTTCACTGGCACTCTTGAGCCTGAAAGCTTGTTCAT TTCAAGTTGCTTAGCAATTTTTCGACTTAGCTATTGCGCGGTGCGCTTTGATATTCTAGTCACTCCAATAATATTCGGTT GTTAACTTCTTATTGGTTTAGTTTTGTAGCAGTAAATTTTTTAGGTATCTGTATTATTGAAAATCATTAACTTTAGTATC TTGTTTTTCAGTTGAATTCCTGAATTTTTTTCTTTTGGTCTGAAGTTCCTGAAAGAGGATTAATAGTCATACCTAAAAAG TTTAGTATTTTCCCATTTTGAATGTAATTTATTTGTTATTTTAGTTTTCAG
CDS sequence (LotjaGi3g1v0059200.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATAAGGGACCACCTCATAGCCTTTTTGTTAATGATGGTTCGTTCATGGCGAGGTTCAAGCAGCTTCAACAAGAGCA GGGGAAGGGGAAGAATACCAAATTAGAGGATTCTAAACCAATTAAAGTTGTTTCTAGACCGCTGACTCCTAATCCTTCCA TTGGTAAGGCTACTGATGCACGAAAAACTTCCCAGGCTGGTTCTAGTGGCAAACTTGCTTTCAGTTTAAAGCAAAAATCA AAGCTAGTTCCACCCCCTATTAAGTTGACTGATGAGGATGAAGAAGAAACTAATGCCGGGGATGTTTCAAATGACGCACC GTCGAAACGGCAAAAGTTGGGTCAGGATGATGATGCTGAGCAATCATCAAGACCACTTGATGTTGGTAATTACTTCTCAC ATAAGCTATATGCACATGTTTGGTTTGTGGTTAGTATTCTATTTCCCATCAAATGCATGAGGGAGGAATTATCAAGTAAA ATAATCAAATAA
Protein sequence (LotjaGi3g1v0059200.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDKGPPHSLFVNDGSFMARFKQLQQEQGKGKNTKLEDSKPIKVVSRPLTPNPSIGKATDARKTSQAGSSGKLAFSLKQKS KLVPPPIKLTDEDEEETNAGDVSNDAPSKRQKLGQDDDAEQSSRPLDVGNYFSHKLYAHVWFVVSILFPIKCMREELSSK IIK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 135 | 135 | - | – | |
| PANTHER | 4 | 128 | 125 | 6.9E-23 | – | |
| PANTHER | 4 | 128 | 125 | 6.9E-23 | ||
| MobiDBLite | 23 | 124 | 102 | - | – | |
| MobiDBLite | 56 | 75 | 20 | - | – | |
| Phobius | 136 | 153 | 18 | - | – | |
| Phobius | 154 | 163 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0059200.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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