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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR040225
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We have found 14 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.572s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0107600.1
n.a. DUF641 family protein; TAIR: AT2G30380.1 MYB family transcription factor; Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|I1MBK1|I1MBK1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0107600 LjG1.1_chr1 16695530 16700312 -
2 domain predictions
2 GO terms
LotjaGi1g1v0602600.1
n.a. DUF641 family protein; TAIR: AT3G60680.1 DUF641 family protein (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A0L9U6Z1|A0A0L9U6Z1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0602600 LjG1.1_chr1 114763092 114766073 +
2 domain predictions
2 GO terms
LotjaGi2g1v0381700.1
n.a. polyamine-modulated factor 1-binding protein; TAIR: AT2G17990.1 polyamine-modulated factor 1-binding protein; Swiss-Prot: sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2; TrEMBL-Plants: tr|I1J8L8|I1J8L8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0381700 LjG1.1_chr2 87815632 87819846 -
2 domain predictions
2 GO terms
LotjaGi2g1v0381700.2
n.a. polyamine-modulated factor 1-binding protein; TAIR: AT2G17990.1 polyamine-modulated factor 1-binding protein; Swiss-Prot: sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2; TrEMBL-Plants: tr|I1J8L8|I1J8L8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0381700 LjG1.1_chr2 87816451 87818798 -
2 domain predictions
2 GO terms
LotjaGi3g1v0040800.1
n.a. UNE1-like protein; TAIR: AT3G14870.1 hypothetical protein (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A151SPA4|A0A151SPA4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0040800 LjG1.1_chr3 4410311 4416278 +
2 domain predictions
2 GO terms
LotjaGi3g1v0040800.2
n.a. UNE1-like protein; TAIR: AT3G14870.1 hypothetical protein (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A151SPA4|A0A151SPA4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0040800 LjG1.1_chr3 4413510 4414883 +
2 domain predictions
2 GO terms
LotjaGi3g1v0436600.1
n.a. myosin-4 protein (DUF641); TAIR: AT2G45260.1 myosin-4 protein (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A151UC96|A0A151UC96_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0436600 LjG1.1_chr3 84794310 84797771 +
2 domain predictions
2 GO terms
LotjaGi3g1v0436600.2
n.a. myosin-4 protein (DUF641); TAIR: AT2G45260.1 myosin-4 protein (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A151UC96|A0A151UC96_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0436600 LjG1.1_chr3 84795820 84797124 +
2 domain predictions
2 GO terms
LotjaGi4g1v0127200.1
n.a. polyamine-modulated factor 1-binding protein; TAIR: AT2G17990.1 polyamine-modulated factor 1-binding protein; Swiss-Prot: sp|P07942|LAMB1_HUMAN Laminin subunit beta-1; TrEMBL-Plants: tr|I3TAA6|I3TAA6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0127200 LjG1.1_chr4 18556058 18562542 -
2 domain predictions
2 GO terms
LotjaGi4g1v0127200.2
n.a. polyamine-modulated factor 1-binding protein; TAIR: AT2G17990.1 polyamine-modulated factor 1-binding protein; Swiss-Prot: sp|P07942|LAMB1_HUMAN Laminin subunit beta-1; TrEMBL-Plants: tr|I3TAA6|I3TAA6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0127200 LjG1.1_chr4 18556740 18561403 -
2 domain predictions
2 GO terms
LotjaGi4g1v0380100.1
n.a. UNE1-like protein; TAIR: AT1G29300.1 intracellular protein transporter, putative (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A0L9TJZ4|A0A0L9TJZ4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0380100 LjG1.1_chr4 75948595 75951071 -
2 domain predictions
2 GO terms
LotjaGi6g1v0134400.1
n.a. DUF641 family protein; TAIR: AT5G58960.2 glucose-6-phosphate isomerase, putative (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A072UXH5|A0A072UXH5_MEDTR DUF641 family protein; Found in the gene: LotjaGi6g1v0134400 LjG1.1_chr6 38763890 38769536 +
2 domain predictions
2 GO terms
LotjaGi6g1v0134400.2
n.a. DUF641 family protein; TAIR: AT5G58960.2 glucose-6-phosphate isomerase, putative (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|I1KYU1|I1KYU1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134400 LjG1.1_chr6 38764784 38766690 +
2 domain predictions
2 GO terms
LotjaGi6g1v0134400.3
n.a. DUF641 family protein; TAIR: AT5G58960.1 glucose-6-phosphate isomerase, putative (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A0L9VCY9|A0A0L9VCY9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134400 LjG1.1_chr6 38764784 38766690 +
2 domain predictions
2 GO terms