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IPR040225 is a Protein gravitropic in the light 1-like.
<p>This entry represents a group of plant proteins including, protein GRAVITROPIC IN THE LIGHT 1 (GIL1) from Arabidopsis. GIL1 is essential for light-dependent randomization of hypocotyl growth orientation [[cite:PUB00090718]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Response to red or far red light | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs. | ||
| Biological process | Negative gravitropism | The orientation of plant parts away from gravity. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | DUF641 family protein; TAIR: AT2G30380.1 MYB family transcription factor; Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|I1MBK1|I1MBK1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0107600 | 6 | ||
| – | DUF641 family protein; TAIR: AT3G60680.1 DUF641 family protein (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A0L9U6Z1|A0A0L9U6Z1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0602600 | 6 | ||
| – | Polyamine-modulated factor 1-binding protein; TAIR: AT2G17990.1 polyamine-modulated factor 1-binding protein; Swiss-Prot: sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2; TrEMBL-Plants: tr|I1J8L8|I1J8L8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0381700 | 4 | ||
| – | Polyamine-modulated factor 1-binding protein; TAIR: AT2G17990.1 polyamine-modulated factor 1-binding protein; Swiss-Prot: sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2; TrEMBL-Plants: tr|I1J8L8|I1J8L8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0381700 | 4 | ||
| – | UNE1-like protein; TAIR: AT3G14870.1 hypothetical protein (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A151SPA4|A0A151SPA4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0040800 | 6 | ||
| – | UNE1-like protein; TAIR: AT3G14870.1 hypothetical protein (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A151SPA4|A0A151SPA4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0040800 | 6 | ||
| – | Myosin-4 protein (DUF641); TAIR: AT2G45260.1 myosin-4 protein (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A151UC96|A0A151UC96_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0436600 | 8 | ||
| – | Myosin-4 protein (DUF641); TAIR: AT2G45260.1 myosin-4 protein (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A151UC96|A0A151UC96_CAJCA Uncharacterized protein; Found in the gene: LotjaGi3g1v0436600 | 8 | ||
| – | Polyamine-modulated factor 1-binding protein; TAIR: AT2G17990.1 polyamine-modulated factor 1-binding protein; Swiss-Prot: sp|P07942|LAMB1_HUMAN Laminin subunit beta-1; TrEMBL-Plants: tr|I3TAA6|I3TAA6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0127200 | 4 | ||
| – | Polyamine-modulated factor 1-binding protein; TAIR: AT2G17990.1 polyamine-modulated factor 1-binding protein; Swiss-Prot: sp|P07942|LAMB1_HUMAN Laminin subunit beta-1; TrEMBL-Plants: tr|I3TAA6|I3TAA6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0127200 | 4 | ||
| – | UNE1-like protein; TAIR: AT1G29300.1 intracellular protein transporter, putative (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A0L9TJZ4|A0A0L9TJZ4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0380100 | 6 | ||
| – | DUF641 family protein; TAIR: AT5G58960.2 glucose-6-phosphate isomerase, putative (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A072UXH5|A0A072UXH5_MEDTR DUF641 family protein; Found in the gene: LotjaGi6g1v0134400 | 7 | ||
| – | DUF641 family protein; TAIR: AT5G58960.2 glucose-6-phosphate isomerase, putative (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|I1KYU1|I1KYU1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134400 | 7 | ||
| – | DUF641 family protein; TAIR: AT5G58960.1 glucose-6-phosphate isomerase, putative (DUF641); Swiss-Prot: sp|Q9LXU9|IRKI_ARATH IRK-interacting protein; TrEMBL-Plants: tr|A0A0L9VCY9|A0A0L9VCY9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134400 | 6 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| PTHR31161:SF14 | PANTHER | 1 | 7.14 |