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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR040896
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.334s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0405800.1
n.a. 26S proteasome non-ATPase regulatory subunit; TAIR: AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5); Swiss-Prot: sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A; TrEMBL-Plants: tr|V7CNL2|V7CNL2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0405800 LjG1.1_chr4 78210282 78216708 +
2 domain predictions
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LotjaGi4g1v0405800.2
n.a. 26S proteasome non-ATPase regulatory subunit; TAIR: AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5); Swiss-Prot: sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A; TrEMBL-Plants: tr|V7CNL2|V7CNL2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0405800 LjG1.1_chr4 78210335 78215181 +
2 domain predictions
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LotjaGi4g1v0405800.3
n.a. 26S proteasome non-ATPase regulatory subunit; TAIR: AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5); Swiss-Prot: sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A; TrEMBL-Plants: tr|I1K4U3|I1K4U3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0405800 LjG1.1_chr4 78210349 78215181 +
2 domain predictions
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LotjaGi4g1v0405800.4
n.a. 26S proteasome non-ATPase regulatory subunit 12; TAIR: AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5); Swiss-Prot: sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A; TrEMBL-Plants: tr|I1K4U3|I1K4U3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0405800 LjG1.1_chr4 78210427 78215181 +
2 domain predictions
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LotjaGi4g1v0405800.5
n.a. 26S proteasome non-ATPase regulatory subunit; TAIR: AT5G09900.2 26S proteasome regulatory subunit, putative (RPN5); Swiss-Prot: sp|Q9FIB6|PS12A_ARATH 26S proteasome non-ATPase regulatory subunit 12 homolog A; TrEMBL-Plants: tr|I1K4U3|I1K4U3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0405800 LjG1.1_chr4 78210605 78215181 +
2 domain predictions
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