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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR043133
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 11 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.669s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0591900_LC.1
n.a. GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|K7MSK2|K7MSK2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0591900_LC LjG1.1_chr1 113180916 113186748 +
2 domain predictions
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LotjaGi1g1v0591900_LC.2
n.a. GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|I3T069|I3T069_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0591900_LC LjG1.1_chr1 113180916 113186748 +
2 domain predictions
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LotjaGi1g1v0591900_LC.3
n.a. GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|K7MSK2|K7MSK2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0591900_LC LjG1.1_chr1 113183232 113186171 +
2 domain predictions
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LotjaGi1g1v0591900_LC.4
n.a. GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|I3T069|I3T069_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0591900_LC LjG1.1_chr1 113183263 113186171 +
2 domain predictions
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LotjaGi1g1v0739400.1
n.a. 7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3S513|I3S513_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi1g1v0739400 LjG1.1_chr1 131348098 131351647 +
2 domain predictions
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LotjaGi3g1v0087600.1
n.a. GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|A0A072TL11|A0A072TL11_MEDTR GTP cyclohydrolase I 1; Found in the gene: LotjaGi3g1v0087600 LjG1.1_chr3 9890680 9894604 +
2 domain predictions
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LotjaGi6g1v0152300_LC.1
n.a. 7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SSH4|I3SSH4_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152300_LC LjG1.1_chr6 42919956 42922876 -
2 domain predictions
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LotjaGi6g1v0152400_LC.1
n.a. 7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SQ87|I3SQ87_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152400_LC LjG1.1_chr6 42950134 42952086 -
2 domain predictions
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LotjaGi6g1v0152400_LC.2
n.a. 7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SSH4|I3SSH4_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152400_LC LjG1.1_chr6 42950134 42952086 -
2 domain predictions
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LotjaGi6g1v0152500.1
n.a. 7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SC22|I3SC22_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152500 LjG1.1_chr6 42958450 42964234 -
2 domain predictions
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LotjaGi6g1v0152500.2
n.a. 7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SC22|I3SC22_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152500 LjG1.1_chr6 42959247 42964058 -
2 domain predictions
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