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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0739400 |
| Transcript ID | LotjaGi1g1v0739400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3S513|I3S513_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi1g1v0739400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131348098..131351647) extracted from Lotus japonicus Gifu genome v1.2.
CACAAAGCCCAAAAGCCACGCACGCTACAAAAAGAAAAAAGACATTCTCCAACAGCATATTCGACAGTGGTGTGTGGCGA CTGGCGACGCTGCATCAATCCTCGTATCGCCGGTGAGTTCCATTCAACTCGTCATGTCAGTGTTTTTGTTTAATTTCTAC AGATTGTAGTCTCGCTTGTTCGTGCAATTGAGATTGCTGCAATTAGCAATTTGATTTCAGTGGAAATGGAGTCTGATAGT GCACTGATTTTTGGAGACAAACTCATTCTGAGGGGATTGACGTTTCATGGTTTTCATGGAGTGAAGCCTGAAGAAAGAAC GCTGGGCCAGAAGTTTCTGGTTGATATTGATGCTTGGATGGATCTCAAGGCTGCTTGCAACTCTGATCACTTGTCTGATA CTCTTAGTTATACTGAAATCTATGAGTGAGTCACCGTCAAATTCTGCATTTCATTGTTCTCTTTTCATATAGTTTCACTG CATCTGAATACGTGTCTTGCATTGGTTCGTAGTATCAGAGTCCCAATGATCAAGTTCGTCTATAATTCGATCCTTATTTC CCGTTTATTCTAATAAAAATGTTCGAACTGTTGGTTCATAGTATTAGAGTCCTAGTGGTCAAGTTGTCTAGGATTCGATC CTTATTTTCCGTTTATTCTAATAAAAATGTTGGAATTGTTGGTTCATGGTATCAGAGTCTCATTGATCAAGTTGTCTAGG ATTTGATCCTTATTTCCCGTTTATTCTAATAAAAATGTTGGAATTGTTGGTTTATAGTATCAGAGTCTCAATGATCAAGT TCTCTTGATTTCGATCCTTATTTTCTCATTATTCTAATAAAAACGTTGAACTTCAGCATAAGCTAAGCGGATATGTGCAT TGATATGATTCAAGTCCAATAGCCTCTCACATGTGAGAAATATAATGTAACTGTTCATTCGTGTGCATTGGGGCAGTTGA TTCATGATATGATAGTAGAGCCTCAATGATCAAGTGGTTTAGAGTTTGATTCTTATTGTCTTTATTATTCTAATAAAAAT AGTTGAATTTCAGCACAAGGCCACCCTTTAATCCCAATAGGCTCTTGTGTGGGGTGCTGTATTAGAAATATAATATGAAA CTATTCATGTGTCTGTTCACCCAACAAGTTTTTAGGATTGTTGGTTCATGACTGTTTAGTGGCTGTAATCTAATTAACAT ATGAAGAATTGGTGATGCAGTGTAGCTAAGGAAGTTCTTGAAGGGCCTCCTCAGAACCTTCTGGAGTCTGTGGCCCAAAA AATTGCAATAACTACTCTGACAAATCATTACCAGATATCTGCTGTTCGTGTGAAGCTTGGAAAGCCTCATATTTCAGTTC GGGGTCCAGTTGATTACATAGGCGTAGAGATTCTTAGGCGCAGAAGTGATTTGCCAGAGTAGAACTTTCATATTTACTAC TGCTGGCTACTGCAGGTTTTTATATCTTCAGTTCTATTTGATACAAATGTAACAACATTATTCTCTCTCACTACACTACC GGTCTATTCTCTCTCTTATCTTGCTTATAAAATTAAAAGATGAAAGTTAGGCATGCCATATATAAACTTCACAACTAATT TGCACTTTCCAAAACAAAACTTTGCAGTCAGACACTGTTATTTTTAAGTTGCCAAAGAGTGTCTGAGTAACGTTGCTATG TAACTATCACTACTCAATTTTAAATTGTTCATTTGTAATTCTTTTTTCCTCAGTGCCATTTTCTTGGAAGTCTCTAATGA AAACCACTTTCTCATTTCCCCTTTGCTAATAGGCATATAAGGTTTGTTCATTTCATAATTTTGAATCAAATGACATGCAA TGCCTGTAACTTTGACATCTAATCTTCTTTGACACCAAAGGTTCATCAATCATGTTGACAAAAATTTACCGGTCAACATG TATGAGTGATTTATGCGAAGAAAGTGTGATTCTGAAAGGTTTCAACGTGAAATTAAATATGCTATCAATGGCAGTAGCTT TCTCATATCAGCTTCGGATGCTAGAAACATTCTTGCTCTATTCTCATCTTCCAAAAAGTCAAAGGCATCCGGCATTGTAT TGTCTTTCTTCCATATCTGTTATATATAGCCTGAGGTAATGCTGATTTTACAGAAAAACGATCCTCTTTTATTCATTTTA CTTAGTGATGCAAATGCAACTGCCATTTATTTCAGAGTATTTGTCAATTGCCATCCTCTAATTGTAACTTATTCAAGGTA TGAAGTAGATTAGGCTGAAATGTTATTTTGATCACTAGAAACCTTCAAAGTAAGGCTTAAGCAGAGGATGAGTTTATCTG GTATACTTTTTTTCACCTACCATGTGAAATGTTCCTTTATCTGCATTATTGTGCATCTGAGAGTAATGGGTAGGTTTTCT TCTAACCATTCATGTGTAATCTTCTTATACTTGCAACTAGGGCCAACTGATATTCCCTTTTCAAGATTTGACTTGCGACC CTCAATTTCTTATCCTCATTTTTTTAAAATGCCATTTGTAATTTTCCAATTAGTTGTGCTAAAAAACGATATGTTTGTGT AATTACTCTCCTAAACAAAGTCGCAATAACGTAAGCTGCGGGTAAGTAGATATTTGATATTTCATCAACATTAAAGTTTG AAAGATACCCTTGTCGCTAGTGTAGGTTGAGCTGAGATTTTAGGTTACTCTTGAGAAACTTTGGTCCTTTCGAGTAAAAT AGATGATTAAAATATTAAATAGAATAAATGTTCTAAAATGTAAACTTAAATGTTGATTACTCTAAGCATGCACGACTTGC TCACCCACACTATTTCTGTTTTGGCACAATAATTTATTGTTTTGATTTTTTTAAAAAACGTGATTTGTTACTGCACGAAG GTATGGAGAGAGTCTCAAGCAAATGCATGATATTCAAGGAATCACTCTCACAAATTACCTGACGATGTTCTAAGTCTCGA GCAAAAAACAACTCATACTTCAAGGCCAAAAGCTCAGAGCATGGAGAGGACAATTAGTATGAAAAGAAGTTGAGAAACCA GTCACCCACTCATAGGTCGGATTGTGAATAATTCCATCAACACCCAACAAGTTGCTACTTGGGCGAAAGCAACCATTAAC ATTGAACTTGACATGAGAACCGTGTGGCGGGAACCAGACCAGGTGAACAAGATGACTAGGAGGAGTAATAATATTTCTAT ATAGAAGGGTGTTGCAAGCTTCACCAAAGAAGAAATATGGTGTAATATTACAACATTAGCATACCACATATAATCATAAA AATGTCATTATTTACCCAACGCCAAATCAGCAAATAATAAGCACATATCTTGGTGAAGATGTATAAGAAAAGCTAGTCAA GCCCACAAATTACTATGCATAAAAGATGCGGATAGAGGAACACCACACCTAGACCAATTTTTGCGGGCATGAGAATAATC GTGAAGACAATAAAAAAGTGTTTCCTCATTTCCCGAACAAAGATTGCTCAAAGGAGAGATAGTAAGAGAACGAGCATGTT TAAGGTTATTAGTAGAAAGTGCATTATGAA
CDS sequence (LotjaGi1g1v0739400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCTGATAGTGCACTGATTTTTGGAGACAAACTCATTCTGAGGGGATTGACGTTTCATGGTTTTCATGGAGTGAA GCCTGAAGAAAGAACGCTGGGCCAGAAGTTTCTGGTTGATATTGATGCTTGGATGGATCTCAAGGCTGCTTGCAACTCTG ATCACTTGTCTGATACTCTTAGTTATACTGAAATCTATGATGTAGCTAAGGAAGTTCTTGAAGGGCCTCCTCAGAACCTT CTGGAGTCTGTGGCCCAAAAAATTGCAATAACTACTCTGACAAATCATTACCAGATATCTGCTGTTCGTGTGAAGCTTGG AAAGCCTCATATTTCAGTTCGGGGTCCAGTTGATTACATAGGCGTAGAGATTCTTAGGCGCAGAAGTGATTTGCCAGAGT AG
Protein sequence (LotjaGi1g1v0739400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESDSALIFGDKLILRGLTFHGFHGVKPEERTLGQKFLVDIDAWMDLKAACNSDHLSDTLSYTEIYDVAKEVLEGPPQNL LESVAQKIAITTLTNHYQISAVRVKLGKPHISVRGPVDYIGVEILRRRSDLPE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 130 | 123 | 4.0E-57 | – | |
| PANTHER | 8 | 130 | 123 | 4.0E-57 | – | |
| Gene3D | 10 | 132 | 123 | 9.5E-43 | ||
| SUPERFAMILY | 11 | 128 | 118 | 7.78E-34 | – | |
| TIGRFAM | 11 | 125 | 115 | 2.2E-29 | ||
| CDD | 11 | 127 | 117 | 2.32689E-42 | ||
| TIGRFAM | 11 | 128 | 118 | 5.6E-28 | ||
| SMART | 13 | 126 | 114 | 1.4E-40 | ||
| Pfam | 14 | 124 | 111 | 8.2E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Dihydroneopterin aldolase activity | Catalysis of the reaction: 2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + glycolaldehyde. | ||
| Biological process | Folic acid-containing compound metabolic process | The chemical reactions and pathways involving a folic acid-containing compound, i.e. any of a group of heterocyclic compounds based on the pteroic acid skeleton conjugated with one or more L-glutamic acid or L-glutamate units. |
Expression pattern of LotjaGi1g1v0739400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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