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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0087600 |
| Transcript ID | LotjaGi3g1v0087600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|A0A072TL11|A0A072TL11_MEDTR GTP cyclohydrolase I 1; Found in the gene: LotjaGi3g1v0087600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:9890680..9894604) extracted from Lotus japonicus Gifu genome v1.2.
CAACCCCAAAAAAAACGTAAAAAAAGAAAAAAAACCATAGCATCATGAATCTTCATCTTTTCTTTTGGTTGCACCGCCTC CATATATATATACCAATCAACCATTGCGCAAAAAACTCACACCAACCTTTCTTCTCTTGGTTTCGTTGATTGGTGGGTCC TCCTTTTGCATTCTGATTAGATTTTGTTACACTCAAATCTCAGAACCGAGGATCCACACATTCTAAGATCAACGTTAACC TCACGAATCCACACATTATCGTTTGTTCTTGTCGGTATTCTATATTTCTCTCATTTTTTCATTGCCAACACCAGATCTGT GAGAGCCTTTTGCATCCTCCATTTTCATGGTTTTGATGCTTATTGGTTTTTTGTGATTTGTGTGTTTTCTCTATCTTTTT GGATTCGTTTTGGCTTGTTCTGAGAATTTGGGTCGTTATTCTGTTAGACCCTTTATTTGTTTTTGCCTTTGTTGTTGGAA AGTTGGGTACTTGAGCAATTCTGGGGTTTCAAAGTTTTGTGGGTAGGTTGGTGTTTTTTTTGCTTTGTTTTGTGTGATTG TTTATTGGGGTGGTGATAGTTTTGTTGTGGGATTTGTTATCAATCAATGGGCTGTTTTGATGAGGGGCAGCATTTCAATG GTGAACTTGAAAATGGAGTGAGTGTTGGATGTGGTGGTGAGGAAGAGGCAGATAAAGCTGCCATTGAGGATGCTGTGAAG GTCCTCTTGTTGGGTCTTGGAGAAGATATCAACAGGGAAGGTATTAGAAAGACACCACTTCGTGTTGCCAAGGCTCTCCG TGAAGGAACCAGAGGTAACATTGAACCTTTTGAATTAATTAATGCTTTTATTGTTTGATCATGTACTTTTCAATAGTACC TTTGAATTCAATTTGATATCAATCTCAAAGGTGGCTTTGATGTTTCTTATATTGAATAAAATATATCTGATTATGTAAAA TTGAAAGGGATGGACTTAATAAGTTATAGTACTAATTAAGAAATTGTGCATAGAGAAGATCTTGTCAAATTTTATTTTGT TTTTTTAATAGAAATCATGTATTTGAAGGAAACTACCCATTTGTCCTGTTTTGAGGAAAAAAGTATTTGGCAAAAGGGCT CAACCCTGTCACGGCAGTTGCTAGATGCATTTTCTGCTTGTCTCTTTTATGTTCCATTTTTGTTTTCCTGTTGAAGATGC TGAAAAGAGCTTATTTAAGCTTATCGTATAGCATAAGCGCTTAAAGTGTTTGGGATAACTTATTTAAATAGCTTATGGTC GCTATAAATTATTTTGAGATTATTTTCATAAACTGCTCAGTTTAGCTTAAGAATAAGCCGTACAACCTATATTGAGCTTA TTTTAATAAGCTTATCAAAATAAGTTATGAATAAGCTTTTGTGCAATAAGCGCTTAATTAAGCTTTTTACCCAAATGCAC CCTTAATACACTCGGAAGAAAGCTCTGAACTTGTGTGTAAAATGAGAAAGTAAGGGTGTATCCACTCTTGGAATTTTATG GGTTACTTACTAAATCAATGGTTGGTGGTTATTGGTTTCTTTGTTCAATTTAGAAGAAGCTCTAAGCCTTATCCCTAATA CCCCATGGTTGGTAGAGGGAGAAGCCATTGGCATCCTACTTTACGCAAAAATTATGATCTTACTCCTTAATCAACTTCTT TGACCTTGAGCAACCTATGCACCTGCTTTTAATCCTCTAAATGTATAGGCTATCTTTAAGGCAAGAATAGACACAGTGAT CATTGCATATTTATATAGCTGCATAACTAGTTCACCCACCATTACTTCAAGCACTAATTTTCTTCTTCTATCTTTGGGTT GGTGCCTTAAATGTTTGCTTTTCATTCTTTCTCCTCATGCATATGTCATTTGGCATCGTATGAAATGAAAAATTGTCTTA TTTTCCTGCATAACATTGTTACTAATCTTGAGGAAATTGATCTTTCCCCAGGTTACAGACAAAAAGTGAAGGACATAGTT GAAGGTGCTTTATTCCCTGAAGCTGGTCTAGAAAATAATAAAATTGGTCATGCAGGGGGAGCAGGTGGACTTGTGATTGT TCGAGATCTTGACCTTTATTCCTACTGTGAGTCATGCTTGCTTCCATTCCAGATAAAATGCCATGTGGGTTATGTTCCTT CTGGCCAAAGAGTTGTCGGCTTAAGCAAGCTTTCTCGAGTGGCTGATGTATTTGCGAAACGACTCCAAGAGCCGCAGCGT CTCGCAGATGAGGTGTGTTCCGCTCTGCAACAGGGAATAAAGCCAGCAGGCGTTGCTGTTATACTTCAGTGTACACATAT CCACTTCCCAGATATAGAATCAATCTTTCTTGAATCAAACCAGAAAGGTGTGATGATACTTGTTTCGTCCGGTTCTGGGG TTTTCGAAAACAAAAATGCAGATTCATGGGCAGATTTCTTCTTCCTTCTTAAATCTAGAGGCATTGACATGGACCAAATT CACCATAGAGGAACGCCTGACCAATACTGGTGTCCGTCTTTGTCTTTGTCTTCTCTTTCTGCTAAAGTTTCCTCCAAAAT TGGACCAGTCAATCCTGCAATGGTCAATGCAGTATCTTCAATCCTTAAATCTTTGGGAGAAGATCCAACAAGGAAGGAGC TTGCAGGGACTCCTAGTCGTTTCGTGAAATGGCTGTCGACCTTCCAAAGCATTGACATGGATGTCAAGCTTAATGGTTCC CTTTGTGGTGGTGGTGTGATAGATTCTGTGAACTCCAATGGAGAGGTAAAGTTGAGTGAAAAACAGATATACTCTGAGGT GAACCTGCCATTTTGGTCACAGTGTGAGCATCACATACTTCCATTTCATGGTGTTGTTCACATAGGATACTTCCTTTCAG AAGGTTTCAATCCTATTGGGAAATCACTTTTACAGTCAATAGTGCATTTTTATGGTTTCAAGCTCCAAGTGCAGGAAAGG CTTACAAGGCAGATAGCAGAAACCCTTTCGCCACTGTTAGGTGGAAATGTAATAGTAGTTGTAGAGGCAAGCCATACATG TATGATCTCTAGGGGAATTGAAAAGTTTGGCAGCAGTACAGCCACCATTGCTGTGTTGGGACGCTTTTTGTCCGACAATG CTGCCAGGGCTGCTTTCTTGCAGAGGATTGCAAGTGCTACATCTTCTGGAGAGCAGTGATTCTTGTTGAAGCCCACTTGA AATGATTTAGCAGTAATTCCATTCATTCTCTGCATTTTTGAAGGTTTTACTACCAGCAGTGCAGCATCCTAGACATTGAT AAGTTCAGAAGACATCCTTTGATGAATAATTTCAGCACATTTCAATGTCAACCAAATTTTGTTCTGGTGGCACAAGCTTA CACTCTGAAATTGTCTATTGATTGATCATTAGATCTTCATATTTTGTCTTCTTGCTTTTATAGCATGTCTGAATCAGCTT CTCTTCACTCATAATCAATTATGTCACTCAGAATCCACTTATAGAAGCTTTTTCCCATAATTTATTTTGGCTTTGGAATC TGTTGAAGAAGGATTTCCAGATCACATGACTTTTGTCATGGGGCACAAGCTTACACCCTGTAATATTCTGATCATTGATG GTCAGATCTTCATATTTTGTCTTGTTGTCTTTTATTTGATCACATGATATGAATCCCCTAAGTTTAAAATTCAAGGGGTG TGTCACTTAGTCTAGATTTACATGTTGGCAATCTTTGGATCTCCCTTAATGTCATTGATATTCGTTGACTCAGGAAATTC TTCTCTATTTAAATTACAATGTTTGTTACTCATTCATATATTATGTAAGATTCAGTCCGTGTTTGGAAATTCTTTTCTAA TTGATTTTCAAGTCGGAATTAGTATTGTGGAGAAGCTTCTCTTTAAGAGCATCTGAATGCAATATTTTTAGTTTTTATTT CTGAG
CDS sequence (LotjaGi3g1v0087600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCTGTTTTGATGAGGGGCAGCATTTCAATGGTGAACTTGAAAATGGAGTGAGTGTTGGATGTGGTGGTGAGGAAGA GGCAGATAAAGCTGCCATTGAGGATGCTGTGAAGGTCCTCTTGTTGGGTCTTGGAGAAGATATCAACAGGGAAGGTATTA GAAAGACACCACTTCGTGTTGCCAAGGCTCTCCGTGAAGGAACCAGAGGTTACAGACAAAAAGTGAAGGACATAGTTGAA GGTGCTTTATTCCCTGAAGCTGGTCTAGAAAATAATAAAATTGGTCATGCAGGGGGAGCAGGTGGACTTGTGATTGTTCG AGATCTTGACCTTTATTCCTACTGTGAGTCATGCTTGCTTCCATTCCAGATAAAATGCCATGTGGGTTATGTTCCTTCTG GCCAAAGAGTTGTCGGCTTAAGCAAGCTTTCTCGAGTGGCTGATGTATTTGCGAAACGACTCCAAGAGCCGCAGCGTCTC GCAGATGAGGTGTGTTCCGCTCTGCAACAGGGAATAAAGCCAGCAGGCGTTGCTGTTATACTTCAGTGTACACATATCCA CTTCCCAGATATAGAATCAATCTTTCTTGAATCAAACCAGAAAGGTGTGATGATACTTGTTTCGTCCGGTTCTGGGGTTT TCGAAAACAAAAATGCAGATTCATGGGCAGATTTCTTCTTCCTTCTTAAATCTAGAGGCATTGACATGGACCAAATTCAC CATAGAGGAACGCCTGACCAATACTGGTGTCCGTCTTTGTCTTTGTCTTCTCTTTCTGCTAAAGTTTCCTCCAAAATTGG ACCAGTCAATCCTGCAATGGTCAATGCAGTATCTTCAATCCTTAAATCTTTGGGAGAAGATCCAACAAGGAAGGAGCTTG CAGGGACTCCTAGTCGTTTCGTGAAATGGCTGTCGACCTTCCAAAGCATTGACATGGATGTCAAGCTTAATGGTTCCCTT TGTGGTGGTGGTGTGATAGATTCTGTGAACTCCAATGGAGAGGTAAAGTTGAGTGAAAAACAGATATACTCTGAGGTGAA CCTGCCATTTTGGTCACAGTGTGAGCATCACATACTTCCATTTCATGGTGTTGTTCACATAGGATACTTCCTTTCAGAAG GTTTCAATCCTATTGGGAAATCACTTTTACAGTCAATAGTGCATTTTTATGGTTTCAAGCTCCAAGTGCAGGAAAGGCTT ACAAGGCAGATAGCAGAAACCCTTTCGCCACTGTTAGGTGGAAATGTAATAGTAGTTGTAGAGGCAAGCCATACATGTAT GATCTCTAGGGGAATTGAAAAGTTTGGCAGCAGTACAGCCACCATTGCTGTGTTGGGACGCTTTTTGTCCGACAATGCTG CCAGGGCTGCTTTCTTGCAGAGGATTGCAAGTGCTACATCTTCTGGAGAGCAGTGA
Protein sequence (LotjaGi3g1v0087600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGCFDEGQHFNGELENGVSVGCGGEEEADKAAIEDAVKVLLLGLGEDINREGIRKTPLRVAKALREGTRGYRQKVKDIVE GALFPEAGLENNKIGHAGGAGGLVIVRDLDLYSYCESCLLPFQIKCHVGYVPSGQRVVGLSKLSRVADVFAKRLQEPQRL ADEVCSALQQGIKPAGVAVILQCTHIHFPDIESIFLESNQKGVMILVSSGSGVFENKNADSWADFFFLLKSRGIDMDQIH HRGTPDQYWCPSLSLSSLSAKVSSKIGPVNPAMVNAVSSILKSLGEDPTRKELAGTPSRFVKWLSTFQSIDMDVKLNGSL CGGGVIDSVNSNGEVKLSEKQIYSEVNLPFWSQCEHHILPFHGVVHIGYFLSEGFNPIGKSLLQSIVHFYGFKLQVQERL TRQIAETLSPLLGGNVIVVVEASHTCMISRGIEKFGSSTATIAVLGRFLSDNAARAAFLQRIASATSSGEQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 468 | 468 | 2.0E-266 | – | |
| PANTHER | 1 | 468 | 468 | 2.0E-266 | ||
| SUPERFAMILY | 9 | 230 | 222 | 3.26E-46 | – | |
| Gene3D | 23 | 76 | 54 | 1.3E-17 | ||
| Pfam | 33 | 186 | 154 | 9.3E-36 | ||
| Gene3D | 95 | 231 | 137 | 2.5E-32 | ||
| SUPERFAMILY | 264 | 462 | 199 | 1.33E-46 | – | |
| Gene3D | 268 | 309 | 42 | 2.5E-10 | ||
| Pfam | 275 | 462 | 188 | 1.6E-37 | ||
| Gene3D | 333 | 465 | 133 | 3.7E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP cyclohydrolase I activity | Catalysis of the reaction: GTP + H2O = formate + 7,8-dihydroneopterin 3'-triphosphate. | ||
| Biological process | Tetrahydrofolate biosynthetic process | The chemical reactions and pathways resulting in the formation of tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin group. |
Expression pattern of LotjaGi3g1v0087600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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