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IPR043133

Description

IPR043133 is a GTP cyclohydrolase I, C-terminal/NADPH-dependent 7-cyano-7-deazaguanine reductase.

<p>GTP cyclohydrolase I ([ec:3.5.4.16]) catalyses the biosynthesis of formic acid and dihydroneopterin triphosphate from GTP [[cite:PUB00022220]]. This reaction is the first step in the biosynthesis of tetrahydrofolate in prokaryotes, of tetrahydrobiopterin in vertebrates, and of pteridine-containing pigments in insects. The comparison of the sequence of the enzyme from bacterial and eukaryotic sources shows that the structure of this enzyme has been extremely well conserved throughout evolution [[cite:PUB00000247]].</p> <p>The QueF (NADPH-dependent 7-cyano-7-deazaguanine reductase) monomer is made up of two ferredoxin-like domains aligned together with their β-sheets that have additional embellishments. QueF catalyses the reduction of the nitrile group of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine [[cite:PUB00062628], [cite:PUB00093723]]. QueF reduces a nitrile bond to a primary amine. The two monomer units together create suitable substrate-binding pockets.</p> <p>This superfamily entry consists of the C-terminal domain found in GTP cyclohydrolases I (GTP-CH-I), which has been well conserved throughout evolution across bacterial and eukaryotic species. The C-terminal domain contains the regions relevant for oligomerisation and enzyme catalysis. The structure of the C-terminal domain of GTP-CH-I is topologically identical to PTPS (6-pyruvoyl tetrahydropterin synthase), despite the lack of sequence homology with PTPS [[cite:PUB00005261]]. The superfamily also includes a domain from NADPH-dependent 7-cyano-7-deazaguanine reductase (QueF). This domain is composed of a three-stranded β-sheet and two α-helices.</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript Name Description Predicted domains Domain count
GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|K7MSK2|K7MSK2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0591900_LC 10
GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|I3T069|I3T069_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0591900_LC 8
GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|K7MSK2|K7MSK2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0591900_LC 10
GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|I3T069|I3T069_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0591900_LC 8
7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3S513|I3S513_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi1g1v0739400 12
GTP cyclohydrolase 1; TAIR: AT3G07270.1 GTP cyclohydrolase I; Swiss-Prot: sp|Q8VYU3|GCH1_SOLLC GTP cyclohydrolase 1; TrEMBL-Plants: tr|A0A072TL11|A0A072TL11_MEDTR GTP cyclohydrolase I 1; Found in the gene: LotjaGi3g1v0087600 10
7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SSH4|I3SSH4_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152300_LC 19
7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SQ87|I3SQ87_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152400_LC 18
7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SSH4|I3SSH4_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152400_LC 18
7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SC22|I3SC22_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152500 19
7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SC22|I3SC22_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152500 19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00534 CDD 1 9.09