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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0152500 |
| Transcript ID | LotjaGi6g1v0152500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 7,8-dihydroneopterin aldolase; TAIR: AT3G11750.1 Dihydroneopterin aldolase; Swiss-Prot: sp|Q9SF23|FOLB1_ARATH Dihydroneopterin aldolase 1; TrEMBL-Plants: tr|I3SC22|I3SC22_LOTJA 7,8-dihydroneopterin aldolase; Found in the gene: LotjaGi6g1v0152500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:42959247..42964058) extracted from Lotus japonicus Gifu genome v1.2.
CTACTTCCTCTACTTCTTGGGCATATTGAGAAATTGATCTCGCTAGTTCTGTGACCCGGTTTATTACCGGAAGGGGTTGT TTAATTCTGGGGGAGTGTTTGGGATAATACCCGAATAAAACTCTCAAGGACAGCGAGTTGATTTTCGTGACTCAACTTAT TTTATTGCAGGTTCTGCTTCGTTCGTGCTATTGCTGTTTCTGTTCCACTAGGGTTACGTTTGTTTCGGTGTTCGTGTTGT TCATCCCAATTTTCCAACAATCTTCAGAGTTTTAATTGATGGACAACGCTGATGTCAATTCCGCAACCCCTTCCTTGTGT CACTGTTGTCTTACAACATCAGTCAAGGATTGTGGAATATCACCGGGTACCTTAGACAAGACGTGATGCCCAAATTATCA CGGGATTCTAACGATATCATTCTATTGTTCTTTGATTATGAAATTGGCCTAGTTAGTTCAGGTATGATCTTCTCTTTCCA TCTTATTTACTAGCTCAGCATGGATTGAAACCACAATGATCATGGCTCTATAATTTGTTTTTCTGAGTCATATAACTTTT GAGTATCATGGTATGTTCCCATCAACTAAGTCACTAAAGTTTACATAAACAACTATCGAATTAGTCCTTCAAGTATGAAA ATTGTGTTCAAATTCACACTGTACATGCATATAATTAATTAATTGACTAAATCATTCATGAGTGTGTACTTTGTTAGTCA GACGATTATGGACTCATGATGCAATGATGCTAATTTTGTCATATTAGTTTTTACCCCACATAGTTTGCCCTGGATAAGTT TGCCCTGGATAAGAGGATTTTCAACCATCTGGAAACTGATTTCTAATTTATTACTTCATCCGTCCCTTATTATAAGTCAC TCTTTTTGAGTTTTTCTAATCTCATAATATAAGTCACTTTACATTATCTATGGAGCATTAATTTTATTTTTCCATGTTTA CCCTCATATTTAATACTCCACATTCAAAGAATTTTTATGTTCCCAAAATTTTGCTTGATTTCCAAGACCCTTATAGTTTA AAGGTAGTTGAATGTTAATATGGAGAGGGAATTTCATATGAGGGTGATTTTGGAAAATGTCTTTAAAAAACTACAAATTT ATTGCTCTTAACAATTTTTCTTAATCCTAGAGAATTGGATAAAAGTGACTTTTAATAGGGGACGGAGGGAGTATATATAT TATCTATTGATTCTTTATATAGGAATCAGAGACATATAAAGAATATTTGAAAAGAGTCCTTAACTTCTACATGCTATACT AATGAACATTTTGTGGGTGACTTTTATGACAGTTTAAAACAACAATAAATTCATGTGGCATGTTAACAGCAGTTGGGTAA AAACCGTCACAAATACGGTTGTGGCAAAAAATGGCTTTGTATATATATATTTGTATCTTTGTGGAAATATTTATAGTTTA GATCATTAAAAATACGTCCATTTTCGTGTTTATAAAAGGTGAATATATTGTAAAATATATTTCTTTTTTATAAAAACAAT GGAAACTTTTCTTGAAATTCTATGTTTCACATATTTATAAAAGAAATTTTTACATTCTTTTAAATTTTCCATGTGCTGGC AGTATTTCTCATCTCAAATCATAAAAAAGTGATATTTAATTTGTTTGTTATTTTTTATGCTTAATTTTACTAATTATATC GGAAGCCCAAAATCAATTTTTTATTATTAAATGGAGAATTCGAGTTGATTCGACTATTAATAAATCATTAGTGTGTCCCA AGTATTTAATAGAAAAATATCTTTTAAAAAAAAGGCCATTCTGGAGGGGGAGTAGACGCTCCCAACTTAATATGTTACAA ATTAGATTATATATCTTCTGCCTTCCGTTTTCACTAAGGATCCGTTTTTTATATTTTTATATTTGTACAACAAAATTTCA TGATTCATTCCAGATAGAGTTACTTCGGTCATATTATTGGGTTTAAACTTGATTCTTGACCCCATCAATGGGCCATCTTC TTATTCTTATAATGTGTTTCAGATTCAAGCAAAGAGAGAATGAACTAGATTAGTATATACATCAAACATTTTGTATCCCT TTTACATTTGCACAATGGCTTCCTCAAAGTCTCAATGCCTTGGTCTGGGGGTTTTTGTTATTCTCTTTTCTCAAGTTTTC TCTCATACACTGGCTCAGGCTGAGGCAACTAATCCCGGTGAGCCATCCCCATTTATATCATTTAATTAGCACTATTTCTT TTTATAAGCCATTTAATTAGCACTATTAACTATTAGTACTAAATTCATTCATGATCTCTTGGTGTTTAATGTAATGCACA CTCTTTTTAACTGATATATAATTTGACTAAAATACTACAGGTTAAAACGTGAGTTATGTTACCAGAAGTGAGTAAAGTTT AAGTCTTTAAAAGATAAAATAATTGTAATTAATGAATAATGGTGTTAATTAACTACAAATTAAAGGTATATGCACTGTTA GTGTAAATTTTATTAACTTTGTCTACATATATAAACATCTAATTGAATTTCATCATTTCATAAAACATTTTTTTATACAT CGGAACATATAAAACATATTTTTATTTCAATTAAAATATAGGTTGAATATATTTTTAGTCCCTAAAAAATAATTAAAGGT TAATTGAATCGGGTCACTTTTAAAAAAATTCATAGCATTTAGTTTCTAACATTATTGTGCCAAATTTTGTCTATTAGCTA GCAATGATTTTTAACAGCTGCAAAATATTTATTTTGCGTTTTAGTTGATTTTTAACGGCTGCAAATTATTTATTTTGCGT TTTAGTCGGGTTTAAAACCACCACCAAATAAACTGAAAAACTAATTTCACTCGTTTTTAATATTGGGATGATAAAAAATG AATTATCTTTAAATGGATCAAATTCAATTTACTCATGTTATATAGGGACTAAATATATTTTAACCCTAAAATTTAAAACA AATGTTACTCAGTTACGGTTCCTCTTTATATGATATATTGTGATTTTTTGTACAAGAGGAAAACATGCATGACATATTGT GATCGGTTAAACTTGTTAATTACTTGATGTTTAGGGCCTGTTTGGTGACCAGGACAGGATAGGATAAGACAGGATAATAA TCATATCCTGTTGTTATCTGTTGTTTGTTGCGCAGCAGGATATGATAACACTATCCTGTCTCCTATCCTATCCTGTCAGT CATGTGTAAAAGTTATCCTGAGGGGTGAGCTAGGATAGAGCAGGATAGGATACCAGTTATATATTTTCTTTCAGTATCCT AACTCCAAATTAATTTATTTTATTATTATATAATTTATAATTTATAATAATATTAATTAATAAATATAAAAATATTAATT TAACTAAAATAAAAAATAAATAAAATTATTATTCATAAATAGTAAAATAGACTACTCACTTACAAATATTGATTTATTAA TAATAATAGACTAATTTAATATTTTCATCTCCTATTATTTAAAAATTATTTATCTACTTATATAAAAATTTAAATATAAA GTATTTTTAAAATAATAATATTTTTAATTTAGTTAATTTTTATTGTTTATCACGTGTCACAACTAAGTGAAAAACATTGA TTATAAATATTGATTTTTTTAATAGTAAAAGATTAATTTTTTATTTTCATCTCCTATTATTTAAAACTACTTATCTACTT ATATAATAATTTATAATTCAAATATAAAGTACTTTTGAAATAATAATATTCTTAATTAAGTTAACTTTTATTGTTAATTA TCACGTCTCACAACTAAGTGAAAACCAATCGGTTAAATGCATAATTTTATTTGAAATATAGGGTATCTTCAAAACAATAA AATAGGCTAATTATTAAAATTTAAATTAATTTAATTTATAATAAAATATACTCATTCATGAAAATGTAAAGAAATTAAAT TTAATAGAATGATCAATTTTAAATGTATTTTTTATTCAAATATAAATCTGATACATTTTTCCGTATCATATCCTGTCCTT ATCATGTGCACCTCAAACACAGGATATGATAAGAGTCTATCCTGCTCTTATCATATCCTGTTGATATCATGTTCACATAT CATATCCTATCATATCCTATCCTGACCACCAAACAGACCCTTAGTTAATTACCATAAATTGCCTCACTTCCTTATTCATG AAACTATATTTGATTATTGCAGCGGAAGTGGAATATTCTGACAAACTCATACTGAGGGGATTTACATTTTATGGTTTTCA CGGATATGCTGAGGAAGAAAGGAAGCTGGGCCAGAAGTTCTTGGTAGATATAGATGCTTGGGTGGATCTCAAGCCAGCTG GCAAATCTGGCAACACATCTGATGCAGTTGATTATTTGAAAATATACAAGTCAGTAAGACGATCGGAAGTCATCAGATCA ATTTCCTTAAGAATTTGAAATCACATTAATTAAGTAATTAAACATTTTTTGACAAATCATTCACTATACAAACCGTCTAG AATTAACCCTCAACTATAAATTTGAACTCATGAATATTATATTGTTTAATTAACATATGTATGTATGATGATATACGCAG GGTAGCTAAGGAAGTTCTTGAAGGGCCAGCATTCAACATTCTGGAGCATGTGGTCGAAAAAATTGCAACGACTGTTCTGA CAAATCATAAAAAGATATCTGCTGTTCGTGTAAAGGTTGTAGAGCCTAATGTTGCGATTCAAGATCCAATTAAGTATATA GGCGTTGAGATTCTTAGACGCAGAAGTGATTTACTTGAATAAGTTGTGAGAATATGATCCTAAAAGATATCTGCTGTTCG TGTAAAGGTTGT
CDS sequence (LotjaGi6g1v0152500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCTCAAAGTCTCAATGCCTTGGTCTGGGGGTTTTTGTTATTCTCTTTTCTCAAGTTTTCTCTCATACACTGGC TCAGGCTGAGGCAACTAATCCCGCGGAAGTGGAATATTCTGACAAACTCATACTGAGGGGATTTACATTTTATGGTTTTC ACGGATATGCTGAGGAAGAAAGGAAGCTGGGCCAGAAGTTCTTGGTAGATATAGATGCTTGGGTGGATCTCAAGCCAGCT GGCAAATCTGGCAACACATCTGATGCAGTTGATTATTTGAAAATATACAAGGTAGCTAAGGAAGTTCTTGAAGGGCCAGC ATTCAACATTCTGGAGCATGTGGTCGAAAAAATTGCAACGACTGTTCTGACAAATCATAAAAAGATATCTGCTGTTCGTG TAAAGGTTGTAGAGCCTAATGTTGCGATTCAAGATCCAATTAAGTATATAGGCGTTGAGATTCTTAGACGCAGAAGTGAT TTACTTGAATAA
Protein sequence (LotjaGi6g1v0152500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSKSQCLGLGVFVILFSQVFSHTLAQAEATNPAEVEYSDKLILRGFTFYGFHGYAEEERKLGQKFLVDIDAWVDLKPA GKSGNTSDAVDYLKIYKVAKEVLEGPAFNILEHVVEKIATTVLTNHKKISAVRVKVVEPNVAIQDPIKYIGVEILRRRSD LLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Phobius | 8 | 18 | 11 | - | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 163 | 140 | - | – | |
| PANTHER | 28 | 160 | 133 | 3.0E-44 | – | |
| PANTHER | 28 | 160 | 133 | 3.0E-44 | – | |
| Gene3D | 40 | 161 | 122 | 7.9E-38 | ||
| TIGRFAM | 41 | 155 | 115 | 1.4E-24 | ||
| CDD | 41 | 157 | 117 | 2.98103E-39 | ||
| TIGRFAM | 41 | 158 | 118 | 1.1E-25 | ||
| SUPERFAMILY | 41 | 158 | 118 | 1.06E-31 | – | |
| SMART | 43 | 156 | 114 | 1.9E-31 | ||
| Pfam | 44 | 154 | 111 | 5.9E-27 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Dihydroneopterin aldolase activity | Catalysis of the reaction: 2-amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine = 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine + glycolaldehyde. | ||
| Biological process | Folic acid-containing compound metabolic process | The chemical reactions and pathways involving a folic acid-containing compound, i.e. any of a group of heterocyclic compounds based on the pteroic acid skeleton conjugated with one or more L-glutamic acid or L-glutamate units. |
Expression pattern of LotjaGi6g1v0152500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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