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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR010033
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.409s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v0385830.1
n.a. Magnesium-dependent phosphatase [Medicago truncatula] gi|357476201|ref|XP_003608386.1| chr4 4975171 4977052 +
2 domain predictions
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Lj6g3v2193470.1
n.a. Magnesium-dependent phosphatase [Medicago truncatula] gi|357445983|ref|XP_003593269.1| chr6 25371156 25372652 -
2 domain predictions
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LotjaGi4g1v0039200.1
n.a. Magnesium-dependent phosphatase 1; TAIR: AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1; TrEMBL-Plants: tr|I3T080|I3T080_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0039200 LjG1.1_chr4 4696596 4705186 +
2 domain predictions
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LotjaGi4g1v0039200.2
n.a. Magnesium-dependent phosphatase 1; TAIR: AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1; TrEMBL-Plants: tr|I3T080|I3T080_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0039200 LjG1.1_chr4 4696615 4705383 +
2 domain predictions
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LotjaGi6g1v0349400.1
n.a. Magnesium-dependent phosphatase 1; TAIR: AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1; TrEMBL-Plants: tr|I3S090|I3S090_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0349400 LjG1.1_chr6 66189640 66195726 -
2 domain predictions
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LotjaGi6g1v0349400.2
n.a. Magnesium-dependent phosphatase 1; TAIR: AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1; TrEMBL-Plants: tr|I3S090|I3S090_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0349400 LjG1.1_chr6 66194085 66195463 -
2 domain predictions
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